RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 WDR35Q9P2L0 1181 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 SUSD2Q9UGT4 822 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 NUP205Q92621 2012 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 OBSL1O75147 1896 aa7.81□□□□□ -1.16
CSDE1-206ENST00000483030 TCHHQ07283 1943 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 FAM92AA1XBS5 289 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 EIF3DO15371 548 aaKnown RBP eCLIP7.8□□□□□ -1.16
CSDE1-206ENST00000483030 GREM1O60565 184 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 BEST1O76090 585 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 CLSTN1O94985 981 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 STAU1O95793 577 aaKnown RBP7.8□□□□□ -1.16
CSDE1-206ENST00000483030 CISD3P0C7P0 127 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 PDCP20941 246 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 CD6P30203 668 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 ATP5C1P36542 298 aaKnown RBP7.8□□□□□ -1.16
CSDE1-206ENST00000483030 DGKGP49619 791 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 MAP3K7CLP57077 242 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 ASIC1P78348 528 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 GRIK2Q13002 908 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 ORC1Q13415 861 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 BIRC3Q13489 604 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 SLC39A14Q15043 492 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 COL28A1Q2UY09 1125 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 ZNF667Q5HYK9 610 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 FAM26FQ5R3K3 315 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 SCARA5Q6ZMJ2 495 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 PDZD3Q86UT5 571 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 NAXDQ8IW45 347 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 ZMIZ2Q8NF64 920 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 MDM1Q8TC05 714 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 SETD7Q8WTS6 366 aaKnown RBP7.8□□□□□ -1.16
CSDE1-206ENST00000483030 HNRNPLLQ8WVV9 542 aaKnown RBP7.8□□□□□ -1.16
CSDE1-206ENST00000483030 FOXJ1Q92949 421 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 TOE1Q96GM8 510 aaKnown RBP7.8□□□□□ -1.16
CSDE1-206ENST00000483030 MS4A3Q96HJ5 214 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 USP28Q96RU2 1077 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 SMOQ99835 787 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 GPR174Q9BXC1 333 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 LRRC27Q9C0I9 530 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 SDCBP2Q9H190 292 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 MIR1-1HGQ9H1L0 117 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 FBXO44Q9H4M3 255 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 CCDC86Q9H6F5 360 aaKnown RBP7.8□□□□□ -1.16
CSDE1-206ENST00000483030 IL21RQ9HBE5 538 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 TLR8Q9NR97 1041 aaKnown RBP7.8□□□□□ -1.16
CSDE1-206ENST00000483030 KRT82Q9NSB4 513 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 KBTBD4Q9NVX7 518 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 PLK2Q9NYY3 685 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 LSM7Q9UK45 103 aaKnown RBP7.8□□□□□ -1.16
CSDE1-206ENST00000483030 APOBEC2Q9Y235 224 aaKnown RBP7.8□□□□□ -1.16
CSDE1-206ENST00000483030 STON1Q9Y6Q2 735 aa7.8□□□□□ -1.16
CSDE1-206ENST00000483030 ANKRD11Q6UB99 2663 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-206ENST00000483030 A0A1B0GTW7 788 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 MEI4A8MW99 385 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 GFRA2O00451 464 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 MDM4O15151 490 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 EXOC3O60645 756 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 CBFA2T3O75081 653 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 NCAM1P13591 858 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 CCDC130P13994 396 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 SYT1P21579 422 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 PLA2G4AP47712 749 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 SNRPFP62306 86 aaKnown RBP7.79□□□□□ -1.16
CSDE1-206ENST00000483030 AMPD3Q01432 767 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 GOLGA8FQ08AF8 430 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 GOLGA8DPQ0D2H9 430 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 NCOA4Q13772 614 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 STARD3Q14849 445 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 ZNF699Q32M78 642 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 FUT11Q495W5 492 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 GLRX5Q86SX6 157 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 ZCCHC9Q8N567 271 aaKnown RBP7.79□□□□□ -1.16
CSDE1-206ENST00000483030 C12orf29Q8N999 325 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 PLEKHO2Q8TD55 490 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 SLC2A14Q8TDB8 520 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 DNASE2BQ8WZ79 361 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 JAKMIP2Q96AA8 810 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 DHX58Q96C10 678 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 ZDHHC5Q9C0B5 715 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 MKRN2Q9H000 416 aaKnown RBP7.79□□□□□ -1.16
CSDE1-206ENST00000483030 TNMDQ9H2S6 317 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 GAREM1Q9H706 876 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 VRTNQ9H8Y1 702 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 PRDM16Q9HAZ2 1276 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 CSNK1G1Q9HCP0 422 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 CYLDQ9NQC7 956 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 ITM2CQ9NQX7 267 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.79□□□□□ -1.16
CSDE1-206ENST00000483030 OSER1Q9NX31 292 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 WSB2Q9NYS7 404 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-206ENST00000483030 MARK1Q9P0L2 795 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 FBXO10Q9UK96 956 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 NUDT5Q9UKK9 219 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 PCOLCE2Q9UKZ9 415 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 DMXL2Q8TDJ6 3036 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 ANAPC1Q9H1A4 1944 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 MYO16Q9Y6X6 1858 aa7.79□□□□□ -1.16
CSDE1-206ENST00000483030 DSPP15924 2871 aaKnown RBP7.78□□□□□ -1.16
CSDE1-206ENST00000483030 KIAA1549LQ6ZVL6 1849 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 A0A1W2PQH9 124 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms