RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 SIT1Q9Y3P8 196 aa17.37■□□□□ 0.37
HMGN1-214ENST00000482733 ANAPC1Q9H1A4 1944 aa17.37■□□□□ 0.37
HMGN1-214ENST00000482733 MDM4O15151 490 aa17.36■□□□□ 0.37
HMGN1-214ENST00000482733 PAPSS1O43252 624 aaPredicted RBP17.36■□□□□ 0.37
HMGN1-214ENST00000482733 IRF1P10914 325 aa17.36■□□□□ 0.37
HMGN1-214ENST00000482733 FERP16591 822 aa17.36■□□□□ 0.37
HMGN1-214ENST00000482733 CTHP32929 405 aa17.36■□□□□ 0.37
HMGN1-214ENST00000482733 UBXN2BQ14CS0 331 aa17.36■□□□□ 0.37
HMGN1-214ENST00000482733 FIGNQ5HY92 759 aa17.36■□□□□ 0.37
HMGN1-214ENST00000482733 TAF3Q5VWG9 929 aa17.36■□□□□ 0.37
HMGN1-214ENST00000482733 TRIM72Q6ZMU5 477 aa17.36■□□□□ 0.37
HMGN1-214ENST00000482733 ZDHHC17Q8IUH5 632 aa17.36■□□□□ 0.37
HMGN1-214ENST00000482733 ADGRG2Q8IZP9 1017 aa17.36■□□□□ 0.37
HMGN1-214ENST00000482733 MSANTD4Q8NCY6 345 aa17.36■□□□□ 0.37
HMGN1-214ENST00000482733 PJA1Q8NG27 643 aa17.36■□□□□ 0.37
HMGN1-214ENST00000482733 TTC8Q8TAM2 541 aa17.36■□□□□ 0.37
HMGN1-214ENST00000482733 CLEC4CQ8WTT0 213 aa17.36■□□□□ 0.37
HMGN1-214ENST00000482733 CPXM1Q96SM3 734 aa17.36■□□□□ 0.37
HMGN1-214ENST00000482733 NUP58Q9BVL2 599 aa17.36■□□□□ 0.37
HMGN1-214ENST00000482733 DCLK3Q9C098 648 aa17.36■□□□□ 0.37
HMGN1-214ENST00000482733 SYNCQ9H7C4 482 aa17.36■□□□□ 0.37
HMGN1-214ENST00000482733 NOCTQ9UK39 431 aaKnown RBP17.36■□□□□ 0.37
HMGN1-214ENST00000482733 HBS1LQ9Y450 684 aaKnown RBP17.36■□□□□ 0.37
HMGN1-214ENST00000482733 SLC12A8A0AV02 714 aa17.35■□□□□ 0.37
HMGN1-214ENST00000482733 FAM170BA6NMN3 283 aa17.35■□□□□ 0.37
HMGN1-214ENST00000482733 GLI1P08151 1106 aa17.35■□□□□ 0.37
HMGN1-214ENST00000482733 MAGEA9P43362 315 aa17.35■□□□□ 0.37
HMGN1-214ENST00000482733 VCPP55072 806 aaKnown RBP17.35■□□□□ 0.37
HMGN1-214ENST00000482733 EFHC1Q5JVL4 640 aa17.35■□□□□ 0.37
HMGN1-214ENST00000482733 MSANTD2Q6P1R3 559 aa17.35■□□□□ 0.37
HMGN1-214ENST00000482733 EDEM1Q92611 657 aa17.35■□□□□ 0.37
HMGN1-214ENST00000482733 FAM149B1Q96BN6 582 aa17.35■□□□□ 0.37
HMGN1-214ENST00000482733 PLD4Q96BZ4 506 aa17.35■□□□□ 0.37
HMGN1-214ENST00000482733 IQCDQ96DY2 449 aa17.35■□□□□ 0.37
HMGN1-214ENST00000482733 PRRX2Q99811 253 aa17.35■□□□□ 0.37
HMGN1-214ENST00000482733 FOXQ1Q9C009 403 aa17.35■□□□□ 0.37
HMGN1-214ENST00000482733 ASNSD1Q9NWL6 643 aa17.35■□□□□ 0.37
HMGN1-214ENST00000482733 OTOL1A6NHN0 477 aaPredicted RBP17.34■□□□□ 0.37
HMGN1-214ENST00000482733 SHISA7A6NL88 538 aa17.34■□□□□ 0.37
HMGN1-214ENST00000482733 CAPN9O14815 690 aa17.34■□□□□ 0.37
HMGN1-214ENST00000482733 CBFA2T2O43439 604 aa17.34■□□□□ 0.37
HMGN1-214ENST00000482733 GREM1O60565 184 aa17.34■□□□□ 0.37
HMGN1-214ENST00000482733 STC2O76061 302 aa17.34■□□□□ 0.37
HMGN1-214ENST00000482733 ADH1CP00326 375 aa17.34■□□□□ 0.37
HMGN1-214ENST00000482733 MMEP08473 750 aa17.34■□□□□ 0.37
HMGN1-214ENST00000482733 NCAM1P13591 858 aa17.34■□□□□ 0.37
HMGN1-214ENST00000482733 CD72P21854 359 aa17.34■□□□□ 0.37
HMGN1-214ENST00000482733 GJA4P35212 333 aa17.34■□□□□ 0.37
HMGN1-214ENST00000482733 SOX9P48436 509 aa17.34■□□□□ 0.37
HMGN1-214ENST00000482733 YWHAZP63104 245 aaKnown RBP17.34■□□□□ 0.37
HMGN1-214ENST00000482733 TOGARAM2Q6ZUX3 1019 aa17.34■□□□□ 0.37
HMGN1-214ENST00000482733 ERICH1Q86X53 443 aa17.34■□□□□ 0.37
HMGN1-214ENST00000482733 BBS7Q8IWZ6 715 aa17.34■□□□□ 0.37
HMGN1-214ENST00000482733 TMEM105Q8N8V8 129 aa17.34■□□□□ 0.37
HMGN1-214ENST00000482733 KCNH6Q9H252 994 aa17.34■□□□□ 0.37
HMGN1-214ENST00000482733 POPDC2Q9HBU9 364 aa17.34■□□□□ 0.37
HMGN1-214ENST00000482733 IFNKQ9P0W0 207 aa17.34■□□□□ 0.37
HMGN1-214ENST00000482733 HCN4Q9Y3Q4 1203 aa17.34■□□□□ 0.37
HMGN1-214ENST00000482733 PI15O43692 258 aa17.33■□□□□ 0.36
HMGN1-214ENST00000482733 HSF2BPO75031 334 aa17.33■□□□□ 0.36
HMGN1-214ENST00000482733 TARSP26639 723 aaKnown RBP17.33■□□□□ 0.36
HMGN1-214ENST00000482733 PBX1P40424 430 aa17.33■□□□□ 0.36
HMGN1-214ENST00000482733 GABRB2P47870 512 aa17.33■□□□□ 0.36
HMGN1-214ENST00000482733 FMO1Q01740 532 aa17.33■□□□□ 0.36
HMGN1-214ENST00000482733 ARID5AQ03989 594 aa17.33■□□□□ 0.36
HMGN1-214ENST00000482733 LRRC32Q14392 662 aa17.33■□□□□ 0.36
HMGN1-214ENST00000482733 DHCR24Q15392 516 aa17.33■□□□□ 0.36
HMGN1-214ENST00000482733 PTPN20Q4JDL3 420 aa17.33■□□□□ 0.36
HMGN1-214ENST00000482733 OR6B2Q6IFH4 312 aa17.33■□□□□ 0.36
HMGN1-214ENST00000482733 Q6ZNB5 142 aa17.33■□□□□ 0.36
HMGN1-214ENST00000482733 CCDC105Q8IYK2 499 aa17.33■□□□□ 0.36
HMGN1-214ENST00000482733 SLC20A1Q8WUM9 679 aa17.33■□□□□ 0.36
HMGN1-214ENST00000482733 BAP1Q92560 729 aa17.33■□□□□ 0.36
HMGN1-214ENST00000482733 C18orf8Q96DM3 657 aa17.33■□□□□ 0.36
HMGN1-214ENST00000482733 SFMBT1Q9UHJ3 866 aa17.33■□□□□ 0.36
HMGN1-214ENST00000482733 NDRG2Q9UN36 371 aaKnown RBP17.33■□□□□ 0.36
HMGN1-214ENST00000482733 MYO16Q9Y6X6 1858 aa17.33■□□□□ 0.36
HMGN1-214ENST00000482733 A0A1W2PQJ5 194 aa17.32■□□□□ 0.36
HMGN1-214ENST00000482733 TRDMT1O14717 391 aaKnown RBP17.32■□□□□ 0.36
HMGN1-214ENST00000482733 SCAMP3O14828 347 aaKnown RBP17.32■□□□□ 0.36
HMGN1-214ENST00000482733 ERBB2P04626 1255 aa17.32■□□□□ 0.36
HMGN1-214ENST00000482733 CYP1A1P04798 512 aaPredicted RBP17.32■□□□□ 0.36
HMGN1-214ENST00000482733 CYP17A1P05093 508 aa17.32■□□□□ 0.36
HMGN1-214ENST00000482733 FYNP06241 537 aa17.32■□□□□ 0.36
HMGN1-214ENST00000482733 HMBSP08397 361 aa17.32■□□□□ 0.36
HMGN1-214ENST00000482733 CHRNB2P17787 502 aa17.32■□□□□ 0.36
HMGN1-214ENST00000482733 SCNN1AP37088 669 aa17.32■□□□□ 0.36
HMGN1-214ENST00000482733 RPS9P46781 194 aaKnown RBP17.32■□□□□ 0.36
HMGN1-214ENST00000482733 HARS2P49590 506 aaKnown RBP17.32■□□□□ 0.36
HMGN1-214ENST00000482733 NOMO3P69849 1222 aa17.32■□□□□ 0.36
HMGN1-214ENST00000482733 SLC6A3Q01959 620 aa17.32■□□□□ 0.36
HMGN1-214ENST00000482733 GAD2Q05329 585 aa17.32■□□□□ 0.36
HMGN1-214ENST00000482733 GRSF1Q12849 480 aaKnown RBP eCLIP17.32■□□□□ 0.36
HMGN1-214ENST00000482733 NNTQ13423 1086 aa17.32■□□□□ 0.36
HMGN1-214ENST00000482733 TRIP4Q15650 581 aaPredicted RBP17.32■□□□□ 0.36
HMGN1-214ENST00000482733 DGKKQ5KSL6 1271 aa17.32■□□□□ 0.36
HMGN1-214ENST00000482733 RHBDF2Q6PJF5 856 aa17.32■□□□□ 0.36
HMGN1-214ENST00000482733 TXNDC11Q6PKC3 985 aa17.32■□□□□ 0.36
HMGN1-214ENST00000482733 OLFML1Q6UWY5 402 aa17.32■□□□□ 0.36
HMGN1-214ENST00000482733 FAM183BPQ6ZVS7 135 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms