RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 SETQ01105 290 aaPredicted RBP7□□□□□ -1.29
CHD6-209ENST00000482596 ORC1Q13415 861 aa7□□□□□ -1.29
CHD6-209ENST00000482596 TAF12Q16514 161 aa7□□□□□ -1.29
CHD6-209ENST00000482596 FUT11Q495W5 492 aa7□□□□□ -1.29
CHD6-209ENST00000482596 LACTB2Q53H82 288 aaPredicted RBP7□□□□□ -1.29
CHD6-209ENST00000482596 FILIP1Q7Z7B0 1213 aa7□□□□□ -1.29
CHD6-209ENST00000482596 ITPRIPQ8IWB1 547 aa7□□□□□ -1.29
CHD6-209ENST00000482596 TP53INP2Q8IXH6 220 aa7□□□□□ -1.29
CHD6-209ENST00000482596 ZNF276Q8N554 614 aa7□□□□□ -1.29
CHD6-209ENST00000482596 ARL14EPQ8N8R7 260 aaPredicted RBP7□□□□□ -1.29
CHD6-209ENST00000482596 MRPS31Q92665 395 aaKnown RBP7□□□□□ -1.29
CHD6-209ENST00000482596 SUSD3Q96L08 255 aa7□□□□□ -1.29
CHD6-209ENST00000482596 SLC6A18Q96N87 628 aa7□□□□□ -1.29
CHD6-209ENST00000482596 UBAC1Q9BSL1 405 aa7□□□□□ -1.29
CHD6-209ENST00000482596 ACE2Q9BYF1 805 aaPredicted RBP7□□□□□ -1.29
CHD6-209ENST00000482596 UNC45AQ9H3U1 944 aa7□□□□□ -1.29
CHD6-209ENST00000482596 TIMMDC1Q9NPL8 285 aa7□□□□□ -1.29
CHD6-209ENST00000482596 PHTF1Q9UMS5 762 aa7□□□□□ -1.29
CHD6-209ENST00000482596 TP53TG5Q9Y2B4 290 aa7□□□□□ -1.29
CHD6-209ENST00000482596 USP20Q9Y2K6 914 aa7□□□□□ -1.29
CHD6-209ENST00000482596 HRH3Q9Y5N1 445 aa7□□□□□ -1.29
CHD6-209ENST00000482596 FLNAP21333 2647 aaKnown RBP7□□□□□ -1.29
CHD6-209ENST00000482596 MYH10P35580 1976 aa7□□□□□ -1.29
CHD6-209ENST00000482596 TCP11X1B4DZS4 312 aa6.99□□□□□ -1.29
CHD6-209ENST00000482596 LZTS3O60299 673 aaPredicted RBP6.99□□□□□ -1.29
CHD6-209ENST00000482596 SDC3O75056 442 aa6.99□□□□□ -1.29
CHD6-209ENST00000482596 STAU1O95793 577 aaKnown RBP6.99□□□□□ -1.29
CHD6-209ENST00000482596 USP17L7P0C7H9 530 aa6.99□□□□□ -1.29
CHD6-209ENST00000482596 RLBP1P12271 317 aa6.99□□□□□ -1.29
CHD6-209ENST00000482596 TGM2P21980 687 aa6.99□□□□□ -1.29
CHD6-209ENST00000482596 KRTAP10-9P60411 292 aa6.99□□□□□ -1.29
CHD6-209ENST00000482596 VEPH1Q14D04 833 aa6.99□□□□□ -1.29
CHD6-209ENST00000482596 MGAT5BQ3V5L5 792 aa6.99□□□□□ -1.29
CHD6-209ENST00000482596 ATF7IP2Q5U623 682 aa6.99□□□□□ -1.29
CHD6-209ENST00000482596 TMEM214Q6NUQ4 689 aaKnown RBP6.99□□□□□ -1.29
CHD6-209ENST00000482596 SND1Q7KZF4 910 aaKnown RBP eCLIP6.99□□□□□ -1.29
CHD6-209ENST00000482596 CYB5R4Q7L1T6 521 aa6.99□□□□□ -1.29
CHD6-209ENST00000482596 GDF7Q7Z4P5 450 aa6.99□□□□□ -1.29
CHD6-209ENST00000482596 ZNF589Q86UQ0 364 aaPredicted RBP6.99□□□□□ -1.29
CHD6-209ENST00000482596 JAMLQ86YT9 394 aa6.99□□□□□ -1.29
CHD6-209ENST00000482596 TEX2Q8IWB9 1127 aa6.99□□□□□ -1.29
CHD6-209ENST00000482596 TERB1Q8NA31 727 aa6.99□□□□□ -1.29
CHD6-209ENST00000482596 TEX19Q8NA77 164 aa6.99□□□□□ -1.29
CHD6-209ENST00000482596 GLIS1Q8NBF1 620 aa6.99□□□□□ -1.29
CHD6-209ENST00000482596 WDR36Q8NI36 951 aaKnown RBP6.99□□□□□ -1.29
CHD6-209ENST00000482596 ARRDC3Q96B67 414 aa6.99□□□□□ -1.29
CHD6-209ENST00000482596 DRC1Q96MC2 740 aa6.99□□□□□ -1.29
CHD6-209ENST00000482596 HEXIM2Q96MH2 286 aaKnown RBP6.99□□□□□ -1.29
CHD6-209ENST00000482596 NUP58Q9BVL2 599 aa6.99□□□□□ -1.29
CHD6-209ENST00000482596 SPZ1Q9BXG8 430 aa6.99□□□□□ -1.29
CHD6-209ENST00000482596 DHX33Q9H6R0 707 aaKnown RBP6.99□□□□□ -1.29
CHD6-209ENST00000482596 CAAP1Q9H8G2 361 aa6.99□□□□□ -1.29
CHD6-209ENST00000482596 ETNK1Q9HBU6 452 aa6.99□□□□□ -1.29
CHD6-209ENST00000482596 SEC63Q9UGP8 760 aaKnown RBP6.99□□□□□ -1.29
CHD6-209ENST00000482596 MAGED2Q9UNF1 606 aaPredicted RBP6.99□□□□□ -1.29
CHD6-209ENST00000482596 NUB1Q9Y5A7 615 aa6.99□□□□□ -1.29
CHD6-209ENST00000482596 TDRD6O60522 2096 aaKnown RBP6.99□□□□□ -1.29
CHD6-209ENST00000482596 RP1P56715 2156 aa6.98□□□□□ -1.29
CHD6-209ENST00000482596 C2orf78A6NCI8 922 aa6.98□□□□□ -1.29
CHD6-209ENST00000482596 POM121CA8CG34 1229 aa6.98□□□□□ -1.29
CHD6-209ENST00000482596 WNT9AO14904 365 aa6.98□□□□□ -1.29
CHD6-209ENST00000482596 TULP3O75386 442 aa6.98□□□□□ -1.29
CHD6-209ENST00000482596 FSBPO95073 299 aa6.98□□□□□ -1.29
CHD6-209ENST00000482596 IGLV3-19P01714 112 aa6.98□□□□□ -1.29
CHD6-209ENST00000482596 ADH5P11766 374 aa6.98□□□□□ -1.29
CHD6-209ENST00000482596 CD27P26842 260 aa6.98□□□□□ -1.29
CHD6-209ENST00000482596 OXTRP30559 389 aa6.98□□□□□ -1.29
CHD6-209ENST00000482596 SLC6A4P31645 630 aa6.98□□□□□ -1.29
CHD6-209ENST00000482596 MCM4P33991 863 aa6.98□□□□□ -1.29
CHD6-209ENST00000482596 IRX6P78412 446 aaPredicted RBP6.98□□□□□ -1.29
CHD6-209ENST00000482596 YWHAHQ04917 246 aaPredicted RBP6.98□□□□□ -1.29
CHD6-209ENST00000482596 LTBQ06643 244 aa6.98□□□□□ -1.29
CHD6-209ENST00000482596 DMP1Q13316 513 aaPredicted RBP6.98□□□□□ -1.29
CHD6-209ENST00000482596 PCBP1Q15365 356 aaKnown RBP eCLIP6.98□□□□□ -1.29
CHD6-209ENST00000482596 SKOR2Q2VWA4 1001 aaPredicted RBP6.98□□□□□ -1.29
CHD6-209ENST00000482596 RNFT1Q5M7Z0 435 aa6.98□□□□□ -1.29
CHD6-209ENST00000482596 ZKSCAN2Q63HK3 967 aa6.98□□□□□ -1.29
CHD6-209ENST00000482596 SDE2Q6IQ49 451 aa6.98□□□□□ -1.29
CHD6-209ENST00000482596 ZFAND4Q86XD8 727 aa6.98□□□□□ -1.29
CHD6-209ENST00000482596 ETFBKMTQ8IXQ9 262 aa6.98□□□□□ -1.29
CHD6-209ENST00000482596 TRIM22Q8IYM9 498 aa6.98□□□□□ -1.29
CHD6-209ENST00000482596 APPL2Q8NEU8 664 aa6.98□□□□□ -1.29
CHD6-209ENST00000482596 FAM227BQ96M60 508 aa6.98□□□□□ -1.29
CHD6-209ENST00000482596 C5orf34Q96MH7 638 aa6.98□□□□□ -1.29
CHD6-209ENST00000482596 JPH2Q9BR39 696 aaPredicted RBP6.98□□□□□ -1.29
CHD6-209ENST00000482596 ABCG4Q9H172 646 aa6.98□□□□□ -1.29
CHD6-209ENST00000482596 PDZD7Q9H5P4 517 aa6.98□□□□□ -1.29
CHD6-209ENST00000482596 LATS2Q9NRM7 1088 aa6.98□□□□□ -1.29
CHD6-209ENST00000482596 GCNT4Q9P109 453 aa6.98□□□□□ -1.29
CHD6-209ENST00000482596 TNRC6AQ8NDV7 1962 aaKnown RBP6.97□□□□□ -1.29
CHD6-209ENST00000482596 TRAV19A0A0A6YYK7 116 aa6.97□□□□□ -1.29
CHD6-209ENST00000482596 A0A0D9SFI3 127 aa6.97□□□□□ -1.29
CHD6-209ENST00000482596 SMIM28A0A1B0GU29 152 aa6.97□□□□□ -1.29
CHD6-209ENST00000482596 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.97□□□□□ -1.29
CHD6-209ENST00000482596 PRRT4C9JH25 899 aa6.97□□□□□ -1.29
CHD6-209ENST00000482596 LEFTY2O00292 366 aa6.97□□□□□ -1.29
CHD6-209ENST00000482596 PLEKHA8P1O95397 391 aa6.97□□□□□ -1.29
CHD6-209ENST00000482596 ARRB1P49407 418 aaPredicted RBP6.97□□□□□ -1.29
CHD6-209ENST00000482596 GPR15P49685 360 aa6.97□□□□□ -1.29
CHD6-209ENST00000482596 GDF10P55107 478 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms