RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 GRXCR1A8MXD5 290 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 NPIPB8E9PQR5 432 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 IL18BPO95998 194 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 FGBP02675 491 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 ENO2P09104 434 aaPredicted RBP7.22□□□□□ -1.25
CLK1-212ENST00000482590 TOP1P11387 765 aaKnown RBP7.22□□□□□ -1.25
CLK1-212ENST00000482590 CALML3P27482 149 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 HOXD12P35452 270 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 SLC16A2P36021 539 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 CCL23P55773 120 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 PSMC6P62333 389 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 SEMA5AQ13591 1074 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 BAATQ14032 418 aaPredicted RBP7.22□□□□□ -1.25
CLK1-212ENST00000482590 PPP2R5BQ15173 497 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 DUSP28Q4G0W2 176 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 MCMDC2Q4G0Z9 681 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 FAM47CQ5HY64 1035 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 TAPT1Q6NXT6 567 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 RSPO2Q6UXX9 243 aaPredicted RBP7.22□□□□□ -1.25
CLK1-212ENST00000482590 SLC30A10Q6XR72 485 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 RNF207Q6ZRF8 634 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 TAX1BP1Q86VP1 789 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 HSCBQ8IWL3 235 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 REXO1L1PQ8IX06 675 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 USP38Q8NB14 1042 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 OR6J1Q8NGC5 347 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 HERVK_113Q902F9 699 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 PTPRN2Q92932 1015 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 RSRC1Q96IZ7 334 aaKnown RBP7.22□□□□□ -1.25
CLK1-212ENST00000482590 UBXN10Q96LJ8 280 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 ADOQ96SZ5 270 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 SLC26A6Q9BXS9 759 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 PRDM12Q9H4Q4 367 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 INCENPQ9NQS7 918 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 PDGFCQ9NRA1 345 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 ANKEF1Q9NU02 776 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 MKS1Q9NXB0 559 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 THEGQ9P2T0 379 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 TMEM98Q9Y2Y6 226 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 DDX49Q9Y6V7 483 aaKnown RBP7.22□□□□□ -1.25
CLK1-212ENST00000482590 CHD7Q9P2D1 2997 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 CCDC171Q6TFL3 1326 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 WDR19Q8NEZ3 1342 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 PRRC2BQ5JSZ5 2229 aaKnown RBP7.21□□□□□ -1.25
CLK1-212ENST00000482590 LOXHD1Q8IVV2 1947 aa7.21□□□□□ -1.25
CLK1-212ENST00000482590 ZNF839A8K0R7 811 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 B4DLN1 442 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 CBX4O00257 560 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 NKRFO15226 690 aaKnown RBP eCLIP7.21□□□□□ -1.26
CLK1-212ENST00000482590 FOXP2O15409 715 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 PFKMP08237 780 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 SUPT20HL2P0C7V6 817 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 ZNF888P0CJ79 500 aaPredicted RBP7.21□□□□□ -1.26
CLK1-212ENST00000482590 PDHBP11177 359 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 PCP11498 1178 aaKnown RBP7.21□□□□□ -1.26
CLK1-212ENST00000482590 ACTN1P12814 892 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 PTGS1P23219 599 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 GRK2P25098 689 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 GRK3P35626 688 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 PIK3CAP42336 1068 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 NOVP48745 357 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 MRPL12P52815 198 aaKnown RBP7.21□□□□□ -1.26
CLK1-212ENST00000482590 PDE1AP54750 535 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 HAND2P61296 217 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 ZNF267Q14586 743 aaPredicted RBP7.21□□□□□ -1.26
CLK1-212ENST00000482590 ALX1Q15699 326 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 MIIPQ5JXC2 388 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 IGFL4Q6B9Z1 124 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 BTNL9Q6UXG8 535 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 MFSD6Q6ZSS7 791 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 C16orf59Q7L2K0 433 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 OTOP2Q7RTS6 562 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 NXPE1Q8N323 547 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 ZBTB34Q8NCN2 500 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 USP13Q92995 863 aaPredicted RBP7.21□□□□□ -1.26
CLK1-212ENST00000482590 RILPL2Q969X0 211 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 ZNF503Q96F45 646 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 NEIL1Q96FI4 390 aaPredicted RBP7.21□□□□□ -1.26
CLK1-212ENST00000482590 FAM227BQ96M60 508 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 RIPOR3Q96MK2 946 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 TMEM47Q9BQJ4 181 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 WDR11Q9BZH6 1224 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 WNT8AQ9H1J5 351 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 RNF41Q9H4P4 317 aaPredicted RBP7.21□□□□□ -1.26
CLK1-212ENST00000482590 EMC7Q9NPA0 242 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 TOPORSQ9NS56 1045 aaPredicted RBP7.21□□□□□ -1.26
CLK1-212ENST00000482590 TCP11L1Q9NUJ3 509 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 MUC3AQ02505 3323 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 BDP1A6H8Y1 2624 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 REV3LO60673 3130 aa7.21□□□□□ -1.26
CLK1-212ENST00000482590 BRWD1Q9NSI6 2320 aa7.2□□□□□ -1.26
CLK1-212ENST00000482590 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.2□□□□□ -1.26
CLK1-212ENST00000482590 GTPBP10A4D1E9 387 aaKnown RBP7.2□□□□□ -1.26
CLK1-212ENST00000482590 RRN3P2A6NIE6 340 aa7.2□□□□□ -1.26
CLK1-212ENST00000482590 H0Y858 1186 aa7.2□□□□□ -1.26
CLK1-212ENST00000482590 IGHDP01880 384 aa7.2□□□□□ -1.26
CLK1-212ENST00000482590 HSPD1P10809 573 aaKnown RBP7.2□□□□□ -1.26
CLK1-212ENST00000482590 PPM1AP35813 382 aa7.2□□□□□ -1.26
CLK1-212ENST00000482590 SESN3P58005 492 aa7.2□□□□□ -1.26
CLK1-212ENST00000482590 RPS6P62753 249 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms