RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 ZNF112Q9UJU3 913 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 APOBEC2Q9Y235 224 aaKnown RBP9.47□□□□□ -0.89
CALD1-220ENST00000482470 COL5A3P25940 1745 aaPredicted RBP9.47□□□□□ -0.89
CALD1-220ENST00000482470 ATP8B3O60423 1300 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 WDR27A2RRH5 827 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 SPECC1L-ADORA2AF8WAN1 911 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 TMEM63AO94886 807 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 KRT16P08779 473 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 GHRP10912 638 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 BCAT1P54687 386 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 RPL10AP62906 217 aaKnown RBP9.47□□□□□ -0.89
CALD1-220ENST00000482470 POU5F1BQ06416 359 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 PLEKHH3Q7Z736 793 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 WDTC1Q8N5D0 677 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 COLGALT1Q8NBJ5 622 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 CLEC4CQ8WTT0 213 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 RNF139Q8WU17 664 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 EXT2Q93063 718 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 PIWIL1Q96J94 861 aaKnown RBP9.47□□□□□ -0.89
CALD1-220ENST00000482470 FZD8Q9H461 694 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 DPEP3Q9H4B8 488 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 PLEKHA5Q9HAU0 1116 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 NUDT5Q9UKK9 219 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 KIAA1257Q9ULG3 409 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 SCN9AQ15858 1988 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 GOT1P17174 413 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 MLH1P40692 756 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 SERPINB4P48594 390 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 HUNKP57058 714 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 ASPHQ12797 758 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 MSS51Q4VC12 460 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 EFHC1Q5JVL4 640 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 C1orf146Q5VVC0 180 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 HOMEZQ8IX15 550 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 AGAP11Q8TF27 550 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 TRIM56Q9BRZ2 755 aaKnown RBP9.47□□□□□ -0.89
CALD1-220ENST00000482470 TMEM120AQ9BXJ8 343 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 SIX4Q9UIU6 781 aa9.47□□□□□ -0.89
CALD1-220ENST00000482470 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.47□□□□□ -0.89
CALD1-220ENST00000482470 NHSQ6T4R5 1651 aa9.46□□□□□ -0.89
CALD1-220ENST00000482470 SRRM3A6NNA2 597 aaPredicted RBP9.46□□□□□ -0.89
CALD1-220ENST00000482470 PPP1R12AO14974 1030 aaPredicted RBP9.46□□□□□ -0.89
CALD1-220ENST00000482470 CSPG5O95196 566 aa9.46□□□□□ -0.89
CALD1-220ENST00000482470 FAM200BP0CF97 657 aa9.46□□□□□ -0.89
CALD1-220ENST00000482470 KCNA4P22459 653 aa9.46□□□□□ -0.89
CALD1-220ENST00000482470 TKTL1P51854 596 aa9.46□□□□□ -0.89
CALD1-220ENST00000482470 ATXN3P54252 364 aaPredicted RBP9.46□□□□□ -0.89
CALD1-220ENST00000482470 BST2Q10589 180 aaKnown RBP9.46□□□□□ -0.89
CALD1-220ENST00000482470 CA9Q16790 459 aa9.46□□□□□ -0.89
CALD1-220ENST00000482470 DCAF4L1Q3SXM0 396 aa9.46□□□□□ -0.89
CALD1-220ENST00000482470 ILDR2Q71H61 639 aa9.46□□□□□ -0.89
CALD1-220ENST00000482470 POLNQ7Z5Q5 900 aa9.46□□□□□ -0.89
CALD1-220ENST00000482470 ECHDC2Q86YB7 292 aa9.46□□□□□ -0.89
CALD1-220ENST00000482470 NKD2Q969F2 451 aaPredicted RBP9.46□□□□□ -0.89
CALD1-220ENST00000482470 FAM193BQ96PV7 902 aaPredicted RBP9.46□□□□□ -0.89
CALD1-220ENST00000482470 CCDC189A1A4V9 331 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 RRN3P2A6NIE6 340 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 SPDYE5A6NIY4 337 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 PIGRP01833 764 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 GSTA1P08263 222 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 MGAT1P26572 445 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 GTF2A2P52657 109 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 AQP5P55064 265 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 NCALDP61601 193 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 PTP4A2Q12974 167 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 PPIL2Q13356 520 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 TARBP2Q15633 366 aaKnown RBP9.46□□□□□ -0.9
CALD1-220ENST00000482470 OTOAQ7RTW8 1153 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 PIGZQ86VD9 579 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 PYROXD2Q8N2H3 581 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 SGF29Q96ES7 293 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 L3MBTL3Q96JM7 780 aaPredicted RBP9.46□□□□□ -0.9
CALD1-220ENST00000482470 TMEM109Q9BVC6 243 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 FBXO6Q9NRD1 293 aaPredicted RBP9.46□□□□□ -0.9
CALD1-220ENST00000482470 KRT82Q9NSB4 513 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 ETNK2Q9NVF9 386 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 CYTH4Q9UIA0 394 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 STYXL1Q9Y6J8 313 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 FAM237BA0A1B0GVD1 139 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 ENO4A6NNW6 628 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 GNAT1P11488 350 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 IVDP26440 423 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 GPD2P43304 727 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 KLF1Q13351 362 aaPredicted RBP9.46□□□□□ -0.9
CALD1-220ENST00000482470 THOC5Q13769 683 aaKnown RBP9.46□□□□□ -0.9
CALD1-220ENST00000482470 PCSK7Q16549 785 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 SV2CQ496J9 727 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 WSCD1Q658N2 575 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 GAD1Q99259 594 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 PARK7Q99497 189 aaKnown RBP9.46□□□□□ -0.9
CALD1-220ENST00000482470 LHX5Q9H2C1 402 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 ABHD16BQ9H3Z7 469 aa9.46□□□□□ -0.9
CALD1-220ENST00000482470 ADAMTSL1Q8N6G6 1762 aa9.45□□□□□ -0.9
CALD1-220ENST00000482470 IQCA1LA6NCM1 817 aa9.45□□□□□ -0.9
CALD1-220ENST00000482470 CCDC22O60826 627 aa9.45□□□□□ -0.9
CALD1-220ENST00000482470 ATG7O95352 703 aa9.45□□□□□ -0.9
CALD1-220ENST00000482470 C22orf31O95567 290 aa9.45□□□□□ -0.9
CALD1-220ENST00000482470 STAMBPO95630 424 aa9.45□□□□□ -0.9
CALD1-220ENST00000482470 POMCP01189 267 aa9.45□□□□□ -0.9
CALD1-220ENST00000482470 JCHAINP01591 159 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms