RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 RSRC2Q7L4I2 434 aaKnown RBP11□□□□□ -0.65
CPSF4-212ENST00000482251 RRAGAQ7L523 313 aa11□□□□□ -0.65
CPSF4-212ENST00000482251 CACNA2D4Q7Z3S7 1137 aa11□□□□□ -0.65
CPSF4-212ENST00000482251 ARHGEF19Q8IW93 802 aa11□□□□□ -0.65
CPSF4-212ENST00000482251 TTC39CQ8N584 583 aa11□□□□□ -0.65
CPSF4-212ENST00000482251 GPR161Q8N6U8 529 aaKnown RBP11□□□□□ -0.65
CPSF4-212ENST00000482251 UBR7Q8N806 425 aa11□□□□□ -0.65
CPSF4-212ENST00000482251 KIAA1958Q8N8K9 716 aa11□□□□□ -0.65
CPSF4-212ENST00000482251 TERB1Q8NA31 727 aa11□□□□□ -0.65
CPSF4-212ENST00000482251 IL17RCQ8NAC3 791 aa11□□□□□ -0.65
CPSF4-212ENST00000482251 ANKRD52Q8NB46 1076 aa11□□□□□ -0.65
CPSF4-212ENST00000482251 BCCIPQ9P287 314 aaKnown RBP eCLIP11□□□□□ -0.65
CPSF4-212ENST00000482251 DEC1Q9P2X7 70 aa11□□□□□ -0.65
CPSF4-212ENST00000482251 HESX1Q9UBX0 185 aa11□□□□□ -0.65
CPSF4-212ENST00000482251 PCDHB4Q9Y5E5 795 aa11□□□□□ -0.65
CPSF4-212ENST00000482251 USP3Q9Y6I4 520 aa11□□□□□ -0.65
CPSF4-212ENST00000482251 RALGAPA1Q6GYQ0 2036 aa11□□□□□ -0.65
CPSF4-212ENST00000482251 CCDC163A0A0D9SF12 145 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 TCRBV21S2A2A0A5A6 115 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 M0QYV0 167 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 O00370 1275 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 XPO1O14980 1071 aaKnown RBP10.99□□□□□ -0.65
CPSF4-212ENST00000482251 ADAM23O75077 832 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 EPN2O95208 641 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 LCP1P13796 627 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 BCKDHBP21953 392 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 KCNA4P22459 653 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 TBXAS1P24557 533 aaPredicted RBP10.99□□□□□ -0.65
CPSF4-212ENST00000482251 CORO1AP31146 461 aaKnown RBP10.99□□□□□ -0.65
CPSF4-212ENST00000482251 PPP1R2P41236 205 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 KIR2DL1P43626 348 aaPredicted RBP10.99□□□□□ -0.65
CPSF4-212ENST00000482251 PSEN1P49768 467 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 RGS7P49802 495 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 MRPS21P82921 87 aaKnown RBP10.99□□□□□ -0.65
CPSF4-212ENST00000482251 BST2Q10589 180 aaKnown RBP10.99□□□□□ -0.65
CPSF4-212ENST00000482251 PUM1Q14671 1186 aaKnown RBP eCLIP10.99□□□□□ -0.65
CPSF4-212ENST00000482251 PLK5Q496M5 336 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 AASDHQ4L235 1098 aaPredicted RBP10.99□□□□□ -0.65
CPSF4-212ENST00000482251 RAB41Q5JT25 222 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 EGFLAMQ63HQ2 1017 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 TCEAL6Q6IPX3 200 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 Q6ZNB5 142 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 HTR3DQ70Z44 454 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 BHLHA9Q7RTU4 235 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 ERMP1Q7Z2K6 904 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 TADA2BQ86TJ2 420 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 CREBRFQ8IUR6 639 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 ELOA2Q8IYF1 753 aaPredicted RBP10.99□□□□□ -0.65
CPSF4-212ENST00000482251 ZNF513Q8N8E2 541 aaPredicted RBP10.99□□□□□ -0.65
CPSF4-212ENST00000482251 CCDC26Q8TAB7 109 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 HMGB4Q8WW32 186 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 RLN3Q8WXF3 142 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 TFAP2BQ92481 460 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 EDEM1Q92611 657 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 TCEAL3Q969E4 200 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 P2RY11Q96G91 374 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 FAXDC2Q96IV6 333 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 IPO9Q96P70 1041 aaKnown RBP10.99□□□□□ -0.65
CPSF4-212ENST00000482251 SRRTQ9BXP5 876 aaKnown RBP10.99□□□□□ -0.65
CPSF4-212ENST00000482251 LRRC4Q9HBW1 653 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 DLL3Q9NYJ7 618 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 MARCH2Q9P0N8 246 aa10.99□□□□□ -0.65
CPSF4-212ENST00000482251 SLC12A8A0AV02 714 aa10.98□□□□□ -0.65
CPSF4-212ENST00000482251 DCDC2BA2VCK2 349 aa10.98□□□□□ -0.65
CPSF4-212ENST00000482251 RNF225M0QZC1 329 aaPredicted RBP10.98□□□□□ -0.65
CPSF4-212ENST00000482251 MSI1O43347 362 aaKnown RBP10.98□□□□□ -0.65
CPSF4-212ENST00000482251 CACNG3O60359 315 aa10.98□□□□□ -0.65
CPSF4-212ENST00000482251 ZBED1O96006 694 aa10.98□□□□□ -0.65
CPSF4-212ENST00000482251 KLKB1P03952 638 aa10.98□□□□□ -0.65
CPSF4-212ENST00000482251 VDRP11473 427 aa10.98□□□□□ -0.65
CPSF4-212ENST00000482251 MPLP40238 635 aa10.98□□□□□ -0.65
CPSF4-212ENST00000482251 PLA2G4AP47712 749 aa10.98□□□□□ -0.65
CPSF4-212ENST00000482251 ATXN1P54253 815 aaKnown RBP10.98□□□□□ -0.65
CPSF4-212ENST00000482251 UBE2HP62256 183 aa10.98□□□□□ -0.65
CPSF4-212ENST00000482251 CREB5Q02930 508 aa10.98□□□□□ -0.65
CPSF4-212ENST00000482251 KCNH2Q12809 1159 aa10.98□□□□□ -0.65
CPSF4-212ENST00000482251 ELF2Q15723 593 aa10.98□□□□□ -0.65
CPSF4-212ENST00000482251 CSRP2Q16527 193 aa10.98□□□□□ -0.65
CPSF4-212ENST00000482251 EOGTQ5NDL2 527 aa10.98□□□□□ -0.65
CPSF4-212ENST00000482251 KLHDC10Q6PID8 442 aa10.98□□□□□ -0.65
CPSF4-212ENST00000482251 RASSF3Q86WH2 238 aa10.98□□□□□ -0.65
CPSF4-212ENST00000482251 DENND1CQ8IV53 801 aa10.98□□□□□ -0.65
CPSF4-212ENST00000482251 TRIM59Q8IWR1 403 aa10.98□□□□□ -0.65
CPSF4-212ENST00000482251 SIX6OS1Q8N1H7 587 aa10.98□□□□□ -0.65
CPSF4-212ENST00000482251 PGBD3Q8N328 593 aa10.98□□□□□ -0.65
CPSF4-212ENST00000482251 FRMD1Q8N878 549 aa10.98□□□□□ -0.65
CPSF4-212ENST00000482251 C12orf50Q8NA57 414 aaPredicted RBP10.98□□□□□ -0.65
CPSF4-212ENST00000482251 RBBP8NLQ8NC74 664 aaPredicted RBP10.98□□□□□ -0.65
CPSF4-212ENST00000482251 CNOT6LQ96LI5 555 aaKnown RBP10.98□□□□□ -0.65
CPSF4-212ENST00000482251 ACOX2Q99424 681 aa10.98□□□□□ -0.65
CPSF4-212ENST00000482251 ZSWIM1Q9BR11 485 aa10.98□□□□□ -0.65
CPSF4-212ENST00000482251 INTS2Q9H0H0 1204 aaKnown RBP10.98□□□□□ -0.65
CPSF4-212ENST00000482251 DUSP15Q9H1R2 295 aaPredicted RBP10.98□□□□□ -0.65
CPSF4-212ENST00000482251 RXFP3Q9NSD7 469 aa10.98□□□□□ -0.65
CPSF4-212ENST00000482251 CLIC5Q9NZA1 410 aa10.98□□□□□ -0.65
CPSF4-212ENST00000482251 EBF1Q9UH73 591 aa10.98□□□□□ -0.65
CPSF4-212ENST00000482251 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.98□□□□□ -0.65
CPSF4-212ENST00000482251 CACNA1AO00555 2505 aa10.97□□□□□ -0.65
CPSF4-212ENST00000482251 YJEFN3A6XGL0 299 aa10.97□□□□□ -0.65
CPSF4-212ENST00000482251 PRR5-ARHGAP8B1AHC4 643 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms