RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 NPAS3Q8IXF0 933 aa21.66■■□□□ 1.06
VPS16-207ENST00000481812 CMTM8Q8IZV2 173 aa21.66■■□□□ 1.06
VPS16-207ENST00000481812 MAB21L3Q8N8X9 362 aa21.66■■□□□ 1.06
VPS16-207ENST00000481812 RFFLQ8WZ73 363 aa21.66■■□□□ 1.06
VPS16-207ENST00000481812 EDEM1Q92611 657 aa21.66■■□□□ 1.06
VPS16-207ENST00000481812 FGF13Q92913 245 aa21.66■■□□□ 1.06
VPS16-207ENST00000481812 ARHGEF26Q96DR7 871 aa21.66■■□□□ 1.06
VPS16-207ENST00000481812 CCSER2Q9H7U1 834 aa21.66■■□□□ 1.06
VPS16-207ENST00000481812 MYO1AQ9UBC5 1043 aa21.66■■□□□ 1.06
VPS16-207ENST00000481812 DNMT3LQ9UJW3 386 aa21.66■■□□□ 1.06
VPS16-207ENST00000481812 CDH7Q9ULB5 785 aa21.66■■□□□ 1.06
VPS16-207ENST00000481812 NAALADL1Q9UQQ1 740 aa21.66■■□□□ 1.06
VPS16-207ENST00000481812 EYSQ5T1H1 3165 aa21.65■■□□□ 1.06
VPS16-207ENST00000481812 ATMINO43313 823 aaPredicted RBP21.65■■□□□ 1.06
VPS16-207ENST00000481812 COCHO43405 550 aa21.65■■□□□ 1.06
VPS16-207ENST00000481812 GRAP2O75791 330 aa21.65■■□□□ 1.06
VPS16-207ENST00000481812 FLT3P36888 993 aa21.65■■□□□ 1.06
VPS16-207ENST00000481812 PTPN9P43378 593 aa21.65■■□□□ 1.06
VPS16-207ENST00000481812 HADHBP55084 474 aaKnown RBP21.65■■□□□ 1.06
VPS16-207ENST00000481812 RNASE9P60153 205 aaKnown RBP21.65■■□□□ 1.06
VPS16-207ENST00000481812 NNTQ13423 1086 aa21.65■■□□□ 1.06
VPS16-207ENST00000481812 DCAF6Q58WW2 860 aa21.65■■□□□ 1.06
VPS16-207ENST00000481812 C10orf120Q5SQS8 335 aa21.65■■□□□ 1.06
VPS16-207ENST00000481812 SYPL2Q5VXT5 272 aa21.65■■□□□ 1.06
VPS16-207ENST00000481812 ZNF662Q6ZS27 426 aa21.65■■□□□ 1.06
VPS16-207ENST00000481812 RSRC2Q7L4I2 434 aaKnown RBP21.65■■□□□ 1.06
VPS16-207ENST00000481812 GET4Q7L5D6 327 aaPredicted RBP21.65■■□□□ 1.06
VPS16-207ENST00000481812 JOSD2Q8TAC2 188 aa21.65■■□□□ 1.06
VPS16-207ENST00000481812 PGAP3Q96FM1 320 aaPredicted RBP21.65■■□□□ 1.06
VPS16-207ENST00000481812 CALR3Q96L12 384 aaKnown RBP21.65■■□□□ 1.06
VPS16-207ENST00000481812 MCEEQ96PE7 176 aa21.65■■□□□ 1.06
VPS16-207ENST00000481812 NPY6RQ99463 290 aa21.65■■□□□ 1.06
VPS16-207ENST00000481812 NUP85Q9BW27 656 aa21.65■■□□□ 1.06
VPS16-207ENST00000481812 RNF38Q9H0F5 515 aa21.65■■□□□ 1.06
VPS16-207ENST00000481812 SMOC2Q9H3U7 446 aa21.65■■□□□ 1.06
VPS16-207ENST00000481812 LCMT1Q9UIC8 334 aa21.65■■□□□ 1.06
VPS16-207ENST00000481812 STAP1Q9ULZ2 295 aa21.65■■□□□ 1.06
VPS16-207ENST00000481812 DPYSL4O14531 572 aa21.64■■□□□ 1.05
VPS16-207ENST00000481812 IGLV3-25P01717 112 aa21.64■■□□□ 1.05
VPS16-207ENST00000481812 CCDC175P0C221 793 aa21.64■■□□□ 1.05
VPS16-207ENST00000481812 PDGFRAP16234 1089 aa21.64■■□□□ 1.05
VPS16-207ENST00000481812 KPNA1P52294 538 aaPredicted RBP21.64■■□□□ 1.05
VPS16-207ENST00000481812 RPL7AP62424 266 aaKnown RBP21.64■■□□□ 1.05
VPS16-207ENST00000481812 EIF4EBP2Q13542 120 aaPredicted RBP21.64■■□□□ 1.05
VPS16-207ENST00000481812 AAK1Q2M2I8 961 aa21.64■■□□□ 1.05
VPS16-207ENST00000481812 SLC25A52Q3SY17 297 aa21.64■■□□□ 1.05
VPS16-207ENST00000481812 STXBP5Q5T5C0 1151 aa21.64■■□□□ 1.05
VPS16-207ENST00000481812 OTOP3Q7RTS5 596 aa21.64■■□□□ 1.05
VPS16-207ENST00000481812 KIAA1328Q86T90 577 aa21.64■■□□□ 1.05
VPS16-207ENST00000481812 DQX1Q8TE96 717 aaKnown RBP21.64■■□□□ 1.05
VPS16-207ENST00000481812 RXFP2Q8WXD0 754 aa21.64■■□□□ 1.05
VPS16-207ENST00000481812 ING5Q8WYH8 240 aa21.64■■□□□ 1.05
VPS16-207ENST00000481812 ZNF830Q96NB3 372 aaPredicted RBP21.64■■□□□ 1.05
VPS16-207ENST00000481812 DESI2Q9BSY9 194 aa21.64■■□□□ 1.05
VPS16-207ENST00000481812 PHF7Q9BWX1 381 aaPredicted RBP21.64■■□□□ 1.05
VPS16-207ENST00000481812 SLITRK6Q9H5Y7 841 aa21.64■■□□□ 1.05
VPS16-207ENST00000481812 TRPV4Q9HBA0 871 aa21.64■■□□□ 1.05
VPS16-207ENST00000481812 TRPC7Q9HCX4 862 aa21.64■■□□□ 1.05
VPS16-207ENST00000481812 CTTNBP2NLQ9P2B4 639 aa21.64■■□□□ 1.05
VPS16-207ENST00000481812 ENDOD1O94919 500 aa21.63■■□□□ 1.05
VPS16-207ENST00000481812 F9P00740 461 aa21.63■■□□□ 1.05
VPS16-207ENST00000481812 TCF3P15923 654 aa21.63■■□□□ 1.05
VPS16-207ENST00000481812 GPD1P21695 349 aa21.63■■□□□ 1.05
VPS16-207ENST00000481812 SDC4P31431 198 aa21.63■■□□□ 1.05
VPS16-207ENST00000481812 AVPR1AP37288 418 aa21.63■■□□□ 1.05
VPS16-207ENST00000481812 ZNF143P52747 638 aaPredicted RBP21.63■■□□□ 1.05
VPS16-207ENST00000481812 COG7P83436 770 aa21.63■■□□□ 1.05
VPS16-207ENST00000481812 ACAP1Q15027 740 aa21.63■■□□□ 1.05
VPS16-207ENST00000481812 PTCRAQ6ISU1 281 aaPredicted RBP21.63■■□□□ 1.05
VPS16-207ENST00000481812 TRNP1Q6NT89 227 aa21.63■■□□□ 1.05
VPS16-207ENST00000481812 POTEHQ6S545 545 aa21.63■■□□□ 1.05
VPS16-207ENST00000481812 BNIPLQ7Z465 357 aa21.63■■□□□ 1.05
VPS16-207ENST00000481812 EMC1Q8N766 993 aa21.63■■□□□ 1.05
VPS16-207ENST00000481812 ARL14EPQ8N8R7 260 aaPredicted RBP21.63■■□□□ 1.05
VPS16-207ENST00000481812 SLC35G2Q8TBE7 412 aa21.63■■□□□ 1.05
VPS16-207ENST00000481812 ZNF564Q8TBZ8 553 aaPredicted RBP21.63■■□□□ 1.05
VPS16-207ENST00000481812 CENPIQ92674 756 aaPredicted RBP21.63■■□□□ 1.05
VPS16-207ENST00000481812 SERPINB11Q96P15 392 aa21.63■■□□□ 1.05
VPS16-207ENST00000481812 MYADMQ96S97 322 aa21.63■■□□□ 1.05
VPS16-207ENST00000481812 CNPY3Q9BT09 278 aa21.63■■□□□ 1.05
VPS16-207ENST00000481812 MARCH2Q9P0N8 246 aa21.63■■□□□ 1.05
VPS16-207ENST00000481812 THEGQ9P2T0 379 aa21.63■■□□□ 1.05
VPS16-207ENST00000481812 ARHGAP26Q9UNA1 814 aa21.63■■□□□ 1.05
VPS16-207ENST00000481812 HBS1LQ9Y450 684 aaKnown RBP21.63■■□□□ 1.05
VPS16-207ENST00000481812 RCCD1A6NED2 376 aa21.62■■□□□ 1.05
VPS16-207ENST00000481812 GJB6O95452 261 aa21.62■■□□□ 1.05
VPS16-207ENST00000481812 TRUB2O95900 331 aaKnown RBP21.62■■□□□ 1.05
VPS16-207ENST00000481812 TBX18O95935 607 aa21.62■■□□□ 1.05
VPS16-207ENST00000481812 CKMP06732 381 aa21.62■■□□□ 1.05
VPS16-207ENST00000481812 LAMP2P13473 410 aa21.62■■□□□ 1.05
VPS16-207ENST00000481812 DESP17661 470 aa21.62■■□□□ 1.05
VPS16-207ENST00000481812 GBP1P32455 592 aa21.62■■□□□ 1.05
VPS16-207ENST00000481812 EFEMP1Q12805 493 aa21.62■■□□□ 1.05
VPS16-207ENST00000481812 KIF5AQ12840 1032 aa21.62■■□□□ 1.05
VPS16-207ENST00000481812 CCDC14Q49A88 953 aa21.62■■□□□ 1.05
VPS16-207ENST00000481812 HS1BP3Q53T59 392 aa21.62■■□□□ 1.05
VPS16-207ENST00000481812 STRADAQ7RTN6 431 aa21.62■■□□□ 1.05
VPS16-207ENST00000481812 KIAA1958Q8N8K9 716 aa21.62■■□□□ 1.05
VPS16-207ENST00000481812 ACSF2Q96CM8 615 aaPredicted RBP21.62■■□□□ 1.05
VPS16-207ENST00000481812 ZSWIM3Q96MP5 696 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms