RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 LSP1P33241 339 aa16.4■□□□□ 0.22
RXRA-202ENST00000481739 RFC2P35250 354 aa16.4■□□□□ 0.22
RXRA-202ENST00000481739 IKBKEQ14164 716 aa16.4■□□□□ 0.22
RXRA-202ENST00000481739 TAF5Q15542 800 aa16.4■□□□□ 0.22
RXRA-202ENST00000481739 PAN2Q504Q3 1202 aaKnown RBP16.4■□□□□ 0.22
RXRA-202ENST00000481739 SH3PXD2AQ5TCZ1 1133 aa16.4■□□□□ 0.22
RXRA-202ENST00000481739 CNKSR3Q6P9H4 555 aa16.4■□□□□ 0.22
RXRA-202ENST00000481739 TRIM43Q96BQ3 446 aaPredicted RBP16.4■□□□□ 0.22
RXRA-202ENST00000481739 SYT15Q9BQS2 421 aa16.4■□□□□ 0.22
RXRA-202ENST00000481739 LRRC4Q9HBW1 653 aa16.4■□□□□ 0.22
RXRA-202ENST00000481739 STAP1Q9ULZ2 295 aa16.4■□□□□ 0.22
RXRA-202ENST00000481739 FARP1Q9Y4F1 1045 aaPredicted RBP16.4■□□□□ 0.22
RXRA-202ENST00000481739 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.4■□□□□ 0.22
RXRA-202ENST00000481739 HCRTO43612 131 aa16.4■□□□□ 0.22
RXRA-202ENST00000481739 ZNF189O75820 626 aaPredicted RBP16.4■□□□□ 0.22
RXRA-202ENST00000481739 B3GAT3O94766 335 aa16.4■□□□□ 0.22
RXRA-202ENST00000481739 ODC1P11926 461 aa16.4■□□□□ 0.22
RXRA-202ENST00000481739 LCP1P13796 627 aa16.4■□□□□ 0.22
RXRA-202ENST00000481739 MAGEA4P43358 317 aa16.4■□□□□ 0.22
RXRA-202ENST00000481739 MRPS5P82675 430 aaKnown RBP16.4■□□□□ 0.22
RXRA-202ENST00000481739 SLC25A52Q3SY17 297 aa16.4■□□□□ 0.22
RXRA-202ENST00000481739 ZNF280BQ86YH2 543 aa16.4■□□□□ 0.22
RXRA-202ENST00000481739 SIX6OS1Q8N1H7 587 aa16.4■□□□□ 0.22
RXRA-202ENST00000481739 GLIS1Q8NBF1 620 aa16.4■□□□□ 0.22
RXRA-202ENST00000481739 C3orf58Q8NDZ4 430 aa16.4■□□□□ 0.22
RXRA-202ENST00000481739 CENPTQ96BT3 561 aa16.4■□□□□ 0.22
RXRA-202ENST00000481739 RTP4Q96DX8 246 aa16.4■□□□□ 0.22
RXRA-202ENST00000481739 FRMD8Q9BZ67 464 aaPredicted RBP16.4■□□□□ 0.22
RXRA-202ENST00000481739 TBC1D13Q9NVG8 400 aa16.4■□□□□ 0.22
RXRA-202ENST00000481739 A0A087WUV0 522 aaPredicted RBP16.39■□□□□ 0.21
RXRA-202ENST00000481739 TLDC2A0PJX2 215 aa16.39■□□□□ 0.21
RXRA-202ENST00000481739 DDHD2O94830 711 aa16.39■□□□□ 0.21
RXRA-202ENST00000481739 UPP2O95045 317 aa16.39■□□□□ 0.21
RXRA-202ENST00000481739 PECAM1P16284 738 aaPredicted RBP16.39■□□□□ 0.21
RXRA-202ENST00000481739 NOS2P35228 1153 aa16.39■□□□□ 0.21
RXRA-202ENST00000481739 MMP13P45452 471 aa16.39■□□□□ 0.21
RXRA-202ENST00000481739 NR2C2P49116 596 aa16.39■□□□□ 0.21
RXRA-202ENST00000481739 GATMP50440 423 aa16.39■□□□□ 0.21
RXRA-202ENST00000481739 BCAR1P56945 870 aa16.39■□□□□ 0.21
RXRA-202ENST00000481739 KYNUQ16719 465 aa16.39■□□□□ 0.21
RXRA-202ENST00000481739 ANKRD20A8PQ5CZ79 823 aa16.39■□□□□ 0.21
RXRA-202ENST00000481739 HASPINQ8TF76 798 aa16.39■□□□□ 0.21
RXRA-202ENST00000481739 PRCCQ92733 491 aaPredicted RBP16.39■□□□□ 0.21
RXRA-202ENST00000481739 MED10Q9BTT4 135 aa16.39■□□□□ 0.21
RXRA-202ENST00000481739 EPN3Q9H201 632 aa16.39■□□□□ 0.21
RXRA-202ENST00000481739 RRN3Q9NYV6 651 aa16.39■□□□□ 0.21
RXRA-202ENST00000481739 TTC3P53804 2025 aa16.39■□□□□ 0.21
RXRA-202ENST00000481739 KIAA0355O15063 1070 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 ALOX15BO15296 676 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 HOXA2O43364 376 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 CDH16O75309 829 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 CYP11A1P05108 521 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 ZSCAN5DPP0CG00 497 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 TSHRP16473 764 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 ITGB8P26012 769 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 OR1G1P47890 313 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 AIF1P55008 147 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 ARL4CP56559 192 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 YWHAZP63104 245 aaKnown RBP16.38■□□□□ 0.21
RXRA-202ENST00000481739 ADIGQ0VDE8 80 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 XRCC4Q13426 336 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 AUHQ13825 339 aaKnown RBP16.38■□□□□ 0.21
RXRA-202ENST00000481739 MDH1BQ5I0G3 518 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 DCLRE1AQ6PJP8 1040 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 PPP1R21Q6ZMI0 780 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 CLEC20AQ6ZU45 233 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 BZW1Q7L1Q6 419 aaKnown RBP16.38■□□□□ 0.21
RXRA-202ENST00000481739 METTL23Q86XA0 190 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 PLD5Q8N7P1 536 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 MYCBPAPQ8TBZ2 947 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 NT5C3BQ969T7 300 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 LPIN3Q9BQK8 851 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 CNGB3Q9NQW8 809 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 SAE1Q9UBE0 346 aaPredicted RBP16.38■□□□□ 0.21
RXRA-202ENST00000481739 AP4E1Q9UPM8 1137 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 MICAL3Q7RTP6 2002 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 BCLAF3A2AJT9 711 aaKnown RBP16.38■□□□□ 0.21
RXRA-202ENST00000481739 I3L4J1 428 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 CSF2RAP15509 400 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 IL4RP24394 825 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 GUCY1A3Q02108 690 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 ADCY1Q08828 1119 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 CBLBQ13191 982 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 MMRN1Q13201 1228 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 HIF1AQ16665 826 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 CCDC142Q17RM4 750 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 DARS2Q6PI48 645 aaKnown RBP16.38■□□□□ 0.21
RXRA-202ENST00000481739 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.38■□□□□ 0.21
RXRA-202ENST00000481739 PAQR9Q6ZVX9 377 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 FAM35AQ86V20 835 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 NPAS4Q8IUM7 802 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 CDKL3Q8IVW4 592 aaPredicted RBP16.38■□□□□ 0.21
RXRA-202ENST00000481739 TMEM199Q8N511 208 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 NAT8LQ8N9F0 302 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 BCAS4Q8TDM0 211 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 EPS8L3Q8TE67 593 aaKnown RBP16.38■□□□□ 0.21
RXRA-202ENST00000481739 SMARCD1Q96GM5 515 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 CASD1Q96PB1 797 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 SLC2A13Q96QE2 648 aa16.38■□□□□ 0.21
RXRA-202ENST00000481739 ACBD6Q9BR61 282 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms