RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 BTBD19C9JJ37 291 aa6.08□□□□□ -1.44
CALD1-219ENST00000480638 UBE2Q2LH0YL09 131 aa6.08□□□□□ -1.44
CALD1-219ENST00000480638 CA12O43570 354 aa6.08□□□□□ -1.44
CALD1-219ENST00000480638 GCATO75600 419 aa6.08□□□□□ -1.44
CALD1-219ENST00000480638 PBX1P40424 430 aa6.08□□□□□ -1.44
CALD1-219ENST00000480638 TXNL4AP83876 142 aaKnown RBP6.08□□□□□ -1.44
CALD1-219ENST00000480638 GRM1Q13255 1194 aa6.08□□□□□ -1.44
CALD1-219ENST00000480638 HDAC1Q13547 482 aaPredicted RBP6.08□□□□□ -1.44
CALD1-219ENST00000480638 ATP1A4Q13733 1029 aa6.08□□□□□ -1.44
CALD1-219ENST00000480638 LARS2Q15031 903 aaKnown RBP6.08□□□□□ -1.44
CALD1-219ENST00000480638 MAPKAPK3Q16644 382 aa6.08□□□□□ -1.44
CALD1-219ENST00000480638 CERKLQ49MI3 558 aaPredicted RBP6.08□□□□□ -1.44
CALD1-219ENST00000480638 P3H2Q8IVL5 708 aa6.08□□□□□ -1.44
CALD1-219ENST00000480638 EDC3Q96F86 508 aaKnown RBP6.08□□□□□ -1.44
CALD1-219ENST00000480638 ASB2Q96Q27 587 aa6.08□□□□□ -1.44
CALD1-219ENST00000480638 STK33Q9BYT3 514 aa6.08□□□□□ -1.44
CALD1-219ENST00000480638 TMEM8AQ9HCN3 771 aa6.08□□□□□ -1.44
CALD1-219ENST00000480638 NECTIN3Q9NQS3 549 aa6.08□□□□□ -1.44
CALD1-219ENST00000480638 ADARB2Q9NS39 739 aaKnown RBP6.08□□□□□ -1.44
CALD1-219ENST00000480638 FLRT1Q9NZU1 646 aa6.08□□□□□ -1.44
CALD1-219ENST00000480638 HNRNPDLO14979 420 aaKnown RBP6.07□□□□□ -1.44
CALD1-219ENST00000480638 ADAMTS3O15072 1205 aa6.07□□□□□ -1.44
CALD1-219ENST00000480638 PLA2G6O60733 806 aa6.07□□□□□ -1.44
CALD1-219ENST00000480638 USP1O94782 785 aa6.07□□□□□ -1.44
CALD1-219ENST00000480638 SERPINB3P29508 390 aa6.07□□□□□ -1.44
CALD1-219ENST00000480638 CFHR3Q02985 330 aa6.07□□□□□ -1.44
CALD1-219ENST00000480638 BTKQ06187 659 aa6.07□□□□□ -1.44
CALD1-219ENST00000480638 NSUN2Q08J23 767 aaKnown RBP eCLIP6.07□□□□□ -1.44
CALD1-219ENST00000480638 FOXF2Q12947 444 aa6.07□□□□□ -1.44
CALD1-219ENST00000480638 UBE4AQ14139 1066 aa6.07□□□□□ -1.44
CALD1-219ENST00000480638 AASDHQ4L235 1098 aaPredicted RBP6.07□□□□□ -1.44
CALD1-219ENST00000480638 TMTC4Q5T4D3 741 aa6.07□□□□□ -1.44
CALD1-219ENST00000480638 C12orf76Q8N812 135 aaPredicted RBP6.07□□□□□ -1.44
CALD1-219ENST00000480638 ACRBPQ8NEB7 543 aa6.07□□□□□ -1.44
CALD1-219ENST00000480638 ADAMTS18Q8TE60 1221 aa6.07□□□□□ -1.44
CALD1-219ENST00000480638 DDB2Q92466 427 aa6.07□□□□□ -1.44
CALD1-219ENST00000480638 GRAMD1AQ96CP6 724 aa6.07□□□□□ -1.44
CALD1-219ENST00000480638 C18orf8Q96DM3 657 aa6.07□□□□□ -1.44
CALD1-219ENST00000480638 USP29Q9HBJ7 922 aa6.07□□□□□ -1.44
CALD1-219ENST00000480638 TM7SF3Q9NS93 570 aa6.07□□□□□ -1.44
CALD1-219ENST00000480638 GAR1Q9NY12 217 aaKnown RBP6.07□□□□□ -1.44
CALD1-219ENST00000480638 H3BNC9 293 aa6.06□□□□□ -1.44
CALD1-219ENST00000480638 PRAMEF2O60811 474 aa6.06□□□□□ -1.44
CALD1-219ENST00000480638 CYP2A6P11509 494 aaPredicted RBP6.06□□□□□ -1.44
CALD1-219ENST00000480638 ATF7P17544 494 aaPredicted RBP6.06□□□□□ -1.44
CALD1-219ENST00000480638 DGKQP52824 942 aa6.06□□□□□ -1.44
CALD1-219ENST00000480638 GPC5P78333 572 aa6.06□□□□□ -1.44
CALD1-219ENST00000480638 DNASE1L3Q13609 305 aa6.06□□□□□ -1.44
CALD1-219ENST00000480638 RAB30Q15771 203 aa6.06□□□□□ -1.44
CALD1-219ENST00000480638 TMEM63BQ5T3F8 832 aa6.06□□□□□ -1.44
CALD1-219ENST00000480638 TMEM65Q6PI78 240 aa6.06□□□□□ -1.44
CALD1-219ENST00000480638 MORC1Q86VD1 984 aa6.06□□□□□ -1.44
CALD1-219ENST00000480638 SRRM1Q8IYB3 904 aaKnown RBP6.06□□□□□ -1.44
CALD1-219ENST00000480638 C8orf58Q8NAV2 365 aa6.06□□□□□ -1.44
CALD1-219ENST00000480638 KAZALD1Q96I82 304 aa6.06□□□□□ -1.44
CALD1-219ENST00000480638 CCDC17Q96LX7 622 aa6.06□□□□□ -1.44
CALD1-219ENST00000480638 HS6ST2Q96MM7 605 aa6.06□□□□□ -1.44
CALD1-219ENST00000480638 SAP30LQ9HAJ7 183 aa6.06□□□□□ -1.44
CALD1-219ENST00000480638 VPS45Q9NRW7 570 aa6.06□□□□□ -1.44
CALD1-219ENST00000480638 CDC23Q9UJX2 597 aa6.06□□□□□ -1.44
CALD1-219ENST00000480638 SLC39A10Q9ULF5 831 aa6.06□□□□□ -1.44
CALD1-219ENST00000480638 PCSK5Q92824 1860 aa6.05□□□□□ -1.44
CALD1-219ENST00000480638 ZSCAN9O15535 394 aaPredicted RBP6.05□□□□□ -1.44
CALD1-219ENST00000480638 VIPP01282 170 aa6.05□□□□□ -1.44
CALD1-219ENST00000480638 DRD1P21728 446 aa6.05□□□□□ -1.44
CALD1-219ENST00000480638 PPM1AP35813 382 aa6.05□□□□□ -1.44
CALD1-219ENST00000480638 HTR3AP46098 478 aa6.05□□□□□ -1.44
CALD1-219ENST00000480638 SRSF4Q08170 494 aaKnown RBP6.05□□□□□ -1.44
CALD1-219ENST00000480638 CCDC15Q0P6D6 951 aa6.05□□□□□ -1.44
CALD1-219ENST00000480638 KCNJ12Q14500 433 aa6.05□□□□□ -1.44
CALD1-219ENST00000480638 KCNB1Q14721 858 aa6.05□□□□□ -1.44
CALD1-219ENST00000480638 MFSD13AQ14CX5 517 aa6.05□□□□□ -1.44
CALD1-219ENST00000480638 C4orf46Q504U0 113 aa6.05□□□□□ -1.44
CALD1-219ENST00000480638 AWAT1Q58HT5 328 aa6.05□□□□□ -1.44
CALD1-219ENST00000480638 TMEM196Q5HYL7 178 aa6.05□□□□□ -1.44
CALD1-219ENST00000480638 FAM90A2PQ658T7 463 aa6.05□□□□□ -1.44
CALD1-219ENST00000480638 ARL6IP4Q66PJ3 421 aaKnown RBP6.05□□□□□ -1.44
CALD1-219ENST00000480638 TLDC1Q6P9B6 456 aa6.05□□□□□ -1.44
CALD1-219ENST00000480638 DCDC5Q6ZRR9 648 aa6.05□□□□□ -1.44
CALD1-219ENST00000480638 TOGARAM2Q6ZUX3 1019 aa6.05□□□□□ -1.44
CALD1-219ENST00000480638 VOPP1Q96AW1 172 aa6.05□□□□□ -1.44
CALD1-219ENST00000480638 SLC39A13Q96H72 371 aa6.05□□□□□ -1.44
CALD1-219ENST00000480638 PRR11Q96HE9 360 aaPredicted RBP6.05□□□□□ -1.44
CALD1-219ENST00000480638 CINPQ9BW66 212 aaPredicted RBP6.05□□□□□ -1.44
CALD1-219ENST00000480638 ARFGAP3Q9NP61 516 aa6.05□□□□□ -1.44
CALD1-219ENST00000480638 FZD4Q9ULV1 537 aa6.05□□□□□ -1.44
CALD1-219ENST00000480638 TMEM232C9JQI7 657 aa6.04□□□□□ -1.44
CALD1-219ENST00000480638 MBPP02686 304 aaPredicted RBP6.04□□□□□ -1.44
CALD1-219ENST00000480638 CELA2AP08217 269 aa6.04□□□□□ -1.44
CALD1-219ENST00000480638 TMIGD3P0DMS9 266 aaPredicted RBP6.04□□□□□ -1.44
CALD1-219ENST00000480638 CYP2D6P10635 497 aa6.04□□□□□ -1.44
CALD1-219ENST00000480638 CERS1P27544 350 aa6.04□□□□□ -1.44
CALD1-219ENST00000480638 EPHB2P29323 1055 aa6.04□□□□□ -1.44
CALD1-219ENST00000480638 GALNSP34059 522 aa6.04□□□□□ -1.44
CALD1-219ENST00000480638 SYTL1Q8IYJ3 562 aa6.04□□□□□ -1.44
CALD1-219ENST00000480638 CLASRPQ8N2M8 674 aaKnown RBP6.04□□□□□ -1.44
CALD1-219ENST00000480638 FAM71DQ8N9W8 422 aa6.04□□□□□ -1.44
CALD1-219ENST00000480638 IPO4Q8TEX9 1081 aaKnown RBP6.04□□□□□ -1.44
CALD1-219ENST00000480638 PNISRQ8TF01 805 aaKnown RBP6.04□□□□□ -1.44
CALD1-219ENST00000480638 C5orf34Q96MH7 638 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms