RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 E2F8A0AVK6 867 aa20.64■□□□□ 0.89
LIME1-205ENST00000480139 AKR1B15C9JRZ8 316 aaPredicted RBP20.64■□□□□ 0.89
LIME1-205ENST00000480139 CALB1P05937 261 aa20.64■□□□□ 0.89
LIME1-205ENST00000480139 CDC25BP30305 580 aa20.64■□□□□ 0.89
LIME1-205ENST00000480139 COG7P83436 770 aa20.64■□□□□ 0.89
LIME1-205ENST00000480139 ZXDAP98168 799 aa20.64■□□□□ 0.89
LIME1-205ENST00000480139 PFKPQ01813 784 aa20.64■□□□□ 0.89
LIME1-205ENST00000480139 C1QBPQ07021 282 aaKnown RBP20.64■□□□□ 0.89
LIME1-205ENST00000480139 EFEMP1Q12805 493 aa20.64■□□□□ 0.89
LIME1-205ENST00000480139 PTP4A2Q12974 167 aa20.64■□□□□ 0.89
LIME1-205ENST00000480139 GRM2Q14416 872 aa20.64■□□□□ 0.89
LIME1-205ENST00000480139 TSR1Q2NL82 804 aaKnown RBP20.64■□□□□ 0.89
LIME1-205ENST00000480139 ACAD10Q6JQN1 1059 aa20.64■□□□□ 0.89
LIME1-205ENST00000480139 MMS22LQ6ZRQ5 1243 aa20.64■□□□□ 0.89
LIME1-205ENST00000480139 MON1BQ7L1V2 547 aa20.64■□□□□ 0.89
LIME1-205ENST00000480139 VPS36Q86VN1 386 aa20.64■□□□□ 0.89
LIME1-205ENST00000480139 IRF7Q92985 503 aa20.64■□□□□ 0.89
LIME1-205ENST00000480139 VCPIP1Q96JH7 1222 aa20.64■□□□□ 0.89
LIME1-205ENST00000480139 SLC2A13Q96QE2 648 aa20.64■□□□□ 0.89
LIME1-205ENST00000480139 SMPD4Q9NXE4 827 aa20.64■□□□□ 0.89
LIME1-205ENST00000480139 MARCH2Q9P0N8 246 aa20.64■□□□□ 0.89
LIME1-205ENST00000480139 WDR35Q9P2L0 1181 aa20.64■□□□□ 0.89
LIME1-205ENST00000480139 RASAL2Q9UJF2 1139 aa20.64■□□□□ 0.89
LIME1-205ENST00000480139 NUDT5Q9UKK9 219 aa20.64■□□□□ 0.89
LIME1-205ENST00000480139 PI4K2BG5E9Z4 385 aa20.63■□□□□ 0.89
LIME1-205ENST00000480139 ARNTLO00327 626 aa20.63■□□□□ 0.89
LIME1-205ENST00000480139 DDX3XO00571 662 aaKnown RBP eCLIP20.63■□□□□ 0.895e-9■■□□□ 12.7
LIME1-205ENST00000480139 ZNF263O14978 683 aa20.63■□□□□ 0.89
LIME1-205ENST00000480139 MDM4O15151 490 aa20.63■□□□□ 0.89
LIME1-205ENST00000480139 NARSO43776 548 aaKnown RBP20.63■□□□□ 0.89
LIME1-205ENST00000480139 NCAM1P13591 858 aa20.63■□□□□ 0.89
LIME1-205ENST00000480139 GDI1P31150 447 aa20.63■□□□□ 0.89
LIME1-205ENST00000480139 GPC5P78333 572 aa20.63■□□□□ 0.89
LIME1-205ENST00000480139 CC2D1AQ6P1N0 951 aaPredicted RBP20.63■□□□□ 0.89
LIME1-205ENST00000480139 WDR59Q6PJI9 974 aa20.63■□□□□ 0.89
LIME1-205ENST00000480139 ARCQ7LC44 396 aa20.63■□□□□ 0.89
LIME1-205ENST00000480139 MIB1Q86YT6 1006 aa20.63■□□□□ 0.89
LIME1-205ENST00000480139 KHSRPQ92945 711 aaKnown RBP eCLIP20.63■□□□□ 0.89
LIME1-205ENST00000480139 C11orf70Q9BRQ4 267 aa20.63■□□□□ 0.89
LIME1-205ENST00000480139 SMOC2Q9H3U7 446 aa20.63■□□□□ 0.89
LIME1-205ENST00000480139 BRD9Q9H8M2 597 aa20.63■□□□□ 0.89
LIME1-205ENST00000480139 ZNHIT6Q9NWK9 470 aaKnown RBP20.63■□□□□ 0.89
LIME1-205ENST00000480139 ADAM22Q9P0K1 906 aa20.63■□□□□ 0.89
LIME1-205ENST00000480139 CFAP97Q9P2B7 532 aa20.63■□□□□ 0.89
LIME1-205ENST00000480139 ARHGAP20Q9P2F6 1191 aa20.63■□□□□ 0.89
LIME1-205ENST00000480139 HBS1LQ9Y450 684 aaKnown RBP20.63■□□□□ 0.89
LIME1-205ENST00000480139 MUC3AQ02505 3323 aa20.63■□□□□ 0.89
LIME1-205ENST00000480139 TICRRQ7Z2Z1 1910 aa20.63■□□□□ 0.89
LIME1-205ENST00000480139 SLC9A3R1O14745 358 aaPredicted RBP20.62■□□□□ 0.89
LIME1-205ENST00000480139 CAPN9O14815 690 aa20.62■□□□□ 0.89
LIME1-205ENST00000480139 DAB1O75553 588 aa20.62■□□□□ 0.89
LIME1-205ENST00000480139 KPNA1P52294 538 aaPredicted RBP20.62■□□□□ 0.89
LIME1-205ENST00000480139 ADKP55263 362 aaKnown RBP20.62■□□□□ 0.89
LIME1-205ENST00000480139 CDK17Q00537 523 aa20.62■□□□□ 0.89
LIME1-205ENST00000480139 NNTQ13423 1086 aa20.62■□□□□ 0.89
LIME1-205ENST00000480139 PDGFRLQ15198 375 aa20.62■□□□□ 0.89
LIME1-205ENST00000480139 TAF5Q15542 800 aa20.62■□□□□ 0.89
LIME1-205ENST00000480139 HTR3DQ70Z44 454 aa20.62■□□□□ 0.89
LIME1-205ENST00000480139 OSCP1Q8WVF1 389 aa20.62■□□□□ 0.89
LIME1-205ENST00000480139 EDAQ92838 391 aa20.62■□□□□ 0.89
LIME1-205ENST00000480139 FAM83CQ9BQN1 747 aa20.62■□□□□ 0.89
LIME1-205ENST00000480139 GKN1Q9NS71 199 aa20.62■□□□□ 0.89
LIME1-205ENST00000480139 WNT16Q9UBV4 365 aa20.62■□□□□ 0.89
LIME1-205ENST00000480139 NAALADL1Q9UQQ1 740 aa20.62■□□□□ 0.89
LIME1-205ENST00000480139 SSU72P8A0A1W2PR75 194 aa20.61■□□□□ 0.89
LIME1-205ENST00000480139 GREM1O60565 184 aa20.61■□□□□ 0.89
LIME1-205ENST00000480139 ADCY5O95622 1261 aa20.61■□□□□ 0.89
LIME1-205ENST00000480139 MAPK8IP2Q13387 824 aaPredicted RBP20.61■□□□□ 0.89
LIME1-205ENST00000480139 C2CD6Q53TS8 623 aa20.61■□□□□ 0.89
LIME1-205ENST00000480139 FAM102AQ5T9C2 384 aaPredicted RBP20.61■□□□□ 0.89
LIME1-205ENST00000480139 SYPL2Q5VXT5 272 aa20.61■□□□□ 0.89
LIME1-205ENST00000480139 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.61■□□□□ 0.89
LIME1-205ENST00000480139 MCOLN2Q8IZK6 566 aa20.61■□□□□ 0.89
LIME1-205ENST00000480139 DQX1Q8TE96 717 aaKnown RBP20.61■□□□□ 0.89
LIME1-205ENST00000480139 PLD4Q96BZ4 506 aa20.61■□□□□ 0.89
LIME1-205ENST00000480139 OTUB2Q96DC9 234 aa20.61■□□□□ 0.89
LIME1-205ENST00000480139 SERPINB11Q96P15 392 aa20.61■□□□□ 0.89
LIME1-205ENST00000480139 RRN3Q9NYV6 651 aa20.61■□□□□ 0.89
LIME1-205ENST00000480139 TBC1D14Q9P2M4 693 aa20.61■□□□□ 0.89
LIME1-205ENST00000480139 LSM7Q9UK45 103 aaKnown RBP20.61■□□□□ 0.89
LIME1-205ENST00000480139 SH3BP1Q9Y3L3 701 aa20.61■□□□□ 0.89
LIME1-205ENST00000480139 RTN2O75298 545 aa20.6■□□□□ 0.89
LIME1-205ENST00000480139 STC2O76061 302 aa20.6■□□□□ 0.89
LIME1-205ENST00000480139 IGLV3-25P01717 112 aa20.6■□□□□ 0.89
LIME1-205ENST00000480139 IGLV3-27P01718 113 aa20.6■□□□□ 0.89
LIME1-205ENST00000480139 PLEKP08567 350 aaPredicted RBP20.6■□□□□ 0.89
LIME1-205ENST00000480139 NOS2P35228 1153 aa20.6■□□□□ 0.89
LIME1-205ENST00000480139 MATKP42679 507 aa20.6■□□□□ 0.89
LIME1-205ENST00000480139 MLLT6P55198 1093 aaPredicted RBP20.6■□□□□ 0.89
LIME1-205ENST00000480139 RING1Q06587 406 aa20.6■□□□□ 0.89
LIME1-205ENST00000480139 SIGLEC14Q08ET2 396 aa20.6■□□□□ 0.89
LIME1-205ENST00000480139 TRIP4Q15650 581 aaPredicted RBP20.6■□□□□ 0.89
LIME1-205ENST00000480139 DEFB106AQ8N104 65 aa20.6■□□□□ 0.89
LIME1-205ENST00000480139 TC2NQ8N9U0 490 aa20.6■□□□□ 0.89
LIME1-205ENST00000480139 C3orf20Q8ND61 904 aa20.6■□□□□ 0.89
LIME1-205ENST00000480139 ASIC4Q96FT7 647 aa20.6■□□□□ 0.89
LIME1-205ENST00000480139 DCLK3Q9C098 648 aa20.6■□□□□ 0.89
LIME1-205ENST00000480139 ISCUQ9H1K1 167 aa20.6■□□□□ 0.89
LIME1-205ENST00000480139 TMEM51Q9NW97 253 aa20.6■□□□□ 0.89
LIME1-205ENST00000480139 DUS2Q9NX74 493 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms