RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 PCDHB5Q9Y5E4 795 aa11.47□□□□□ -0.57
VTI1A-204ENST00000480057 YJEFN3A6XGL0 299 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 E7ENQ6 273 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 H3BRJ5 948 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 M0QYT0 321 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 TNFRSF10BO14763 440 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 DGKIO75912 1065 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 TIMP1P01033 207 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 AMHP03971 560 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 FYNP06241 537 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 USP17L7P0C7H9 530 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 IL4RP24394 825 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 STIP1P31948 543 aaKnown RBP11.46□□□□□ -0.57
VTI1A-204ENST00000480057 ADCY8P40145 1251 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 PLTPP55058 493 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 BCAR1P56945 870 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 OTUD4Q01804 1114 aaKnown RBP11.46□□□□□ -0.57
VTI1A-204ENST00000480057 XRCC4Q13426 336 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 LLGL1Q15334 1064 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 SLC39A12Q504Y0 691 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 RHBDF2Q6PJF5 856 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 BZW1Q7L1Q6 419 aaKnown RBP11.46□□□□□ -0.57
VTI1A-204ENST00000480057 GSTA5Q7RTV2 222 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 NECAB2Q7Z6G3 386 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 PCGF5Q86SE9 256 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 RNF168Q8IYW5 571 aaPredicted RBP11.46□□□□□ -0.57
VTI1A-204ENST00000480057 ARHGAP18Q8N392 663 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 GOLGA6L1Q8N7Z2 621 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 TSEN2Q8NCE0 465 aaKnown RBP11.46□□□□□ -0.57
VTI1A-204ENST00000480057 TET1Q8NFU7 2136 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 FBXO25Q8TCJ0 367 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 SPPL2BQ8TCT7 592 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 DIS3LQ8TF46 1054 aaKnown RBP11.46□□□□□ -0.57
VTI1A-204ENST00000480057 P3H4Q92791 437 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 TMEM209Q96SK2 561 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 PHACTR1Q9C0D0 580 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 FBXO44Q9H4M3 255 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 ABCC13Q9NSE7 274 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 IL37Q9NZH6 218 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 BACE2Q9Y5Z0 518 aa11.46□□□□□ -0.57
VTI1A-204ENST00000480057 VWA8A3KMH1 1905 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.45□□□□□ -0.58
VTI1A-204ENST00000480057 BAIAP3O94812 1187 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 IGLV3-25P01717 112 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 NCAM1P13591 858 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 RARGP13631 454 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 TFE3P19532 575 aaPredicted RBP11.45□□□□□ -0.58
VTI1A-204ENST00000480057 CYP2F1P24903 491 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 HSD17B3P37058 310 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 GRIK1P39086 918 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 ARL4AP40617 200 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 HCAR3P49019 387 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 GATMP50440 423 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 SLC5A3P53794 718 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 EIF3BP55884 814 aaKnown RBP11.45□□□□□ -0.58
VTI1A-204ENST00000480057 EIF3EP60228 445 aaKnown RBP11.45□□□□□ -0.58
VTI1A-204ENST00000480057 GPR17Q13304 367 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 ARL13BQ3SXY8 428 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 RAB6CQ53S08 254 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 ZC3H12AQ5D1E8 599 aaKnown RBP11.45□□□□□ -0.58
VTI1A-204ENST00000480057 EFHC2Q5JST6 749 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 BSPRYQ5W0U4 402 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 C4orf22Q6V702 233 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 HFE2Q6ZVN8 426 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 DEFB128Q7Z7B8 93 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 CROCCP2Q86T23 111 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 RELL1Q8IUW5 271 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 NUP93Q8N1F7 819 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 PQLC3Q8N755 202 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 PLD5Q8N7P1 536 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 PCDH19Q8TAB3 1148 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 SLC7A14Q8TBB6 771 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 SP7Q8TDD2 431 aaPredicted RBP11.45□□□□□ -0.58
VTI1A-204ENST00000480057 NDRG1Q92597 394 aaKnown RBP11.45□□□□□ -0.58
VTI1A-204ENST00000480057 TOP1MTQ969P6 601 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 HAUS1Q96CS2 278 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 VWCEQ96DN2 955 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 RTP4Q96DX8 246 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 SPATA17Q96L03 361 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 GDAP1L1Q96MZ0 367 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 RUFY1Q96T51 708 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 SH3GL2Q99962 352 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 TTPALQ9BTX7 342 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 ADAM33Q9BZ11 813 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 GPR62Q9BZJ7 368 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 RAB6CQ9H0N0 254 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 DHX35Q9H5Z1 703 aaKnown RBP11.45□□□□□ -0.58
VTI1A-204ENST00000480057 MTMR10Q9NXD2 777 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 HSFX1Q9UBD0 423 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 STK39Q9UEW8 545 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 FBXW11Q9UKB1 542 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 NAALADL1Q9UQQ1 740 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 SCML2Q9UQR0 700 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 RAD54BQ9Y620 910 aa11.45□□□□□ -0.58
VTI1A-204ENST00000480057 PLXNA3P51805 1871 aa11.44□□□□□ -0.58
VTI1A-204ENST00000480057 COL4A6Q14031 1691 aa11.44□□□□□ -0.58
VTI1A-204ENST00000480057 FAM92AA1XBS5 289 aa11.44□□□□□ -0.58
VTI1A-204ENST00000480057 BCLAF3A2AJT9 711 aaKnown RBP11.44□□□□□ -0.58
VTI1A-204ENST00000480057 SPDYE4A6NLX3 237 aa11.44□□□□□ -0.58
VTI1A-204ENST00000480057 HACD1B0YJ81 288 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms