RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 CLK2P49760 499 aaKnown RBP21.94■■□□□ 1.1
SDF4-206ENST00000478938 CCT8P50990 548 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 OTUD4Q01804 1114 aaKnown RBP21.94■■□□□ 1.1
SDF4-206ENST00000478938 SPIRE1Q08AE8 756 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 NFX1Q12986 1120 aaKnown RBP21.94■■□□□ 1.1
SDF4-206ENST00000478938 PEX5LQ8IYB4 626 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 FIBCD1Q8N539 461 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 WNK4Q96J92 1243 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 TMEM79Q9BSE2 394 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 KLHL25Q9H0H3 589 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 PCIF1Q9H4Z3 704 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 DKK3Q9UBP4 350 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 TNS2Q63HR2 1409 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 COL4A1P02462 1669 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 TOM1L1O75674 476 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 PROSCO94903 275 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 BMP10O95393 424 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 CD1EP15812 388 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 XRCC1P18887 633 aaPredicted RBP21.94■■□□□ 1.1
SDF4-206ENST00000478938 HSD17B4P51659 736 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 TXNL4AP83876 142 aaKnown RBP21.94■■□□□ 1.1
SDF4-206ENST00000478938 PARP10Q53GL7 1025 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 MAVSQ7Z434 540 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 CARM1Q86X55 608 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 KATNAL2Q8IYT4 538 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 CADM3Q8N126 398 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 CPA5Q8WXQ8 436 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 CPT1BQ92523 772 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 DHX38Q92620 1227 aaKnown RBP21.94■■□□□ 1.1
SDF4-206ENST00000478938 CMTM5Q96DZ9 223 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 FERMT1Q9BQL6 677 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 KLHL3Q9UH77 587 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 EXOC7Q9UPT5 735 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 SNX9Q9Y5X1 595 aa21.94■■□□□ 1.1
SDF4-206ENST00000478938 TCRBV9S1A1TA0A576 114 aa21.93■■□□□ 1.1
SDF4-206ENST00000478938 GRIN3BO60391 1043 aa21.93■■□□□ 1.1
SDF4-206ENST00000478938 ENTPD3O75355 529 aa21.93■■□□□ 1.1
SDF4-206ENST00000478938 TOP3BO95985 862 aaKnown RBP21.93■■□□□ 1.1
SDF4-206ENST00000478938 ZNF26P17031 533 aaPredicted RBP21.93■■□□□ 1.1
SDF4-206ENST00000478938 TUBA4AP68366 448 aa21.93■■□□□ 1.1
SDF4-206ENST00000478938 NFIL3Q16649 462 aa21.93■■□□□ 1.1
SDF4-206ENST00000478938 CAVIN4Q5BKX8 364 aa21.93■■□□□ 1.1
SDF4-206ENST00000478938 VWA5B1Q5TIE3 1220 aa21.93■■□□□ 1.1
SDF4-206ENST00000478938 PDPK2PQ6A1A2 396 aa21.93■■□□□ 1.1
SDF4-206ENST00000478938 FAM84BQ96KN1 310 aaPredicted RBP21.93■■□□□ 1.1
SDF4-206ENST00000478938 STK39Q9UEW8 545 aa21.93■■□□□ 1.1
SDF4-206ENST00000478938 TISP43B9A030 160 aa21.93■■□□□ 1.1
SDF4-206ENST00000478938 P4HA1P13674 534 aa21.93■■□□□ 1.1
SDF4-206ENST00000478938 NR4A1P22736 598 aa21.93■■□□□ 1.1
SDF4-206ENST00000478938 KLRK1P26718 216 aa21.93■■□□□ 1.1
SDF4-206ENST00000478938 THOP1P52888 689 aa21.93■■□□□ 1.1
SDF4-206ENST00000478938 EIF3EP60228 445 aaKnown RBP21.93■■□□□ 1.1
SDF4-206ENST00000478938 PTP4A2Q12974 167 aa21.93■■□□□ 1.1
SDF4-206ENST00000478938 GPR107Q5VW38 600 aa21.93■■□□□ 1.1
SDF4-206ENST00000478938 TMEM126BQ8IUX1 230 aa21.93■■□□□ 1.1
SDF4-206ENST00000478938 MYO1HQ8N1T3 1032 aa21.93■■□□□ 1.1
SDF4-206ENST00000478938 RNF148Q8N7C7 305 aa21.93■■□□□ 1.1
SDF4-206ENST00000478938 BHLHE22Q8NFJ8 381 aaPredicted RBP21.93■■□□□ 1.1
SDF4-206ENST00000478938 EFHD2Q96C19 240 aaPredicted RBP21.93■■□□□ 1.1
SDF4-206ENST00000478938 CCDC138Q96M89 665 aa21.93■■□□□ 1.1
SDF4-206ENST00000478938 NAA50Q9GZZ1 169 aaKnown RBP21.93■■□□□ 1.1
SDF4-206ENST00000478938 PARVBQ9HBI1 364 aa21.93■■□□□ 1.1
SDF4-206ENST00000478938 ERVK-11Q9UQG0 969 aa21.93■■□□□ 1.1
SDF4-206ENST00000478938 CARD8Q9Y2G2 431 aa21.93■■□□□ 1.1
SDF4-206ENST00000478938 PSTPIP1O43586 416 aa21.92■■□□□ 1.1
SDF4-206ENST00000478938 KLHL41O60662 606 aa21.92■■□□□ 1.1
SDF4-206ENST00000478938 HSPA8P11142 646 aaKnown RBP21.92■■□□□ 1.1
SDF4-206ENST00000478938 TCF4P15884 667 aa21.92■■□□□ 1.1
SDF4-206ENST00000478938 ADRA2BP18089 450 aa21.92■■□□□ 1.1
SDF4-206ENST00000478938 ENDOUP21128 410 aaKnown RBP21.92■■□□□ 1.1
SDF4-206ENST00000478938 BMPR2Q13873 1038 aa21.92■■□□□ 1.1
SDF4-206ENST00000478938 MOGQ16653 247 aa21.92■■□□□ 1.1
SDF4-206ENST00000478938 TIGD2Q4W5G0 525 aa21.92■■□□□ 1.1
SDF4-206ENST00000478938 SUSD4Q5VX71 490 aa21.92■■□□□ 1.1
SDF4-206ENST00000478938 TMCO5AQ8N6Q1 288 aa21.92■■□□□ 1.1
SDF4-206ENST00000478938 SEMA6AQ9H2E6 1030 aa21.92■■□□□ 1.1
SDF4-206ENST00000478938 CCDC68Q9H2F9 335 aa21.92■■□□□ 1.1
SDF4-206ENST00000478938 ARHGAP26Q9UNA1 814 aa21.92■■□□□ 1.1
SDF4-206ENST00000478938 SNCAIPQ9Y6H5 919 aa21.92■■□□□ 1.1
SDF4-206ENST00000478938 TMEM63AO94886 807 aa21.92■■□□□ 1.1
SDF4-206ENST00000478938 COX4I1P13073 169 aa21.92■■□□□ 1.1
SDF4-206ENST00000478938 CETN1Q12798 172 aa21.92■■□□□ 1.1
SDF4-206ENST00000478938 ANKRD26P1Q6NSI1 321 aa21.92■■□□□ 1.1
SDF4-206ENST00000478938 EEPD1Q7L9B9 569 aa21.92■■□□□ 1.1
SDF4-206ENST00000478938 POLNQ7Z5Q5 900 aa21.92■■□□□ 1.1
SDF4-206ENST00000478938 MCOLN2Q8IZK6 566 aa21.92■■□□□ 1.1
SDF4-206ENST00000478938 EXD1Q8NHP7 514 aa21.92■■□□□ 1.1
SDF4-206ENST00000478938 DDX1Q92499 740 aaKnown RBP21.92■■□□□ 1.1
SDF4-206ENST00000478938 EYA3Q99504 573 aa21.92■■□□□ 1.1
SDF4-206ENST00000478938 PNPLA3Q9NST1 481 aa21.92■■□□□ 1.1
SDF4-206ENST00000478938 DAPK2Q9UIK4 370 aa21.92■■□□□ 1.1
SDF4-206ENST00000478938 USP17L15C9J2P7 530 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 USP17L13C9JLJ4 530 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 USP17L11C9JVI0 530 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 USP17L18D6R9N7 530 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 USP17L22D6RA61 530 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 USP17L17D6RBQ6 530 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 USP17L19D6RCP7 530 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 USP17L20D6RJB6 530 aa21.91■■□□□ 1.1
SDF4-206ENST00000478938 hCG_1984214I3L0E3 225 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms