RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 ADGRG3Q86Y34 549 aa4.59□□□□□ -1.67
SMARCA1-204ENST00000478420 P3H2Q8IVL5 708 aa4.59□□□□□ -1.67
SMARCA1-204ENST00000478420 ENAHQ8N8S7 591 aaPredicted RBP4.59□□□□□ -1.67
SMARCA1-204ENST00000478420 FAM98AQ8NCA5 519 aaKnown RBP4.59□□□□□ -1.67
SMARCA1-204ENST00000478420 IPO4Q8TEX9 1081 aaKnown RBP4.59□□□□□ -1.67
SMARCA1-204ENST00000478420 POF1BQ8WVV4 589 aa4.59□□□□□ -1.67
SMARCA1-204ENST00000478420 PMM1Q92871 262 aa4.59□□□□□ -1.67
SMARCA1-204ENST00000478420 SNX18Q96RF0 628 aa4.59□□□□□ -1.67
SMARCA1-204ENST00000478420 WDR24Q96S15 920 aa4.59□□□□□ -1.67
SMARCA1-204ENST00000478420 MACROD1Q9BQ69 325 aa4.59□□□□□ -1.67
SMARCA1-204ENST00000478420 NUDT22Q9BRQ3 303 aa4.59□□□□□ -1.67
SMARCA1-204ENST00000478420 PRDM13Q9H4Q3 707 aa4.59□□□□□ -1.67
SMARCA1-204ENST00000478420 HELLSQ9NRZ9 838 aa4.59□□□□□ -1.67
SMARCA1-204ENST00000478420 PLEKHD1A6NEE1 506 aa4.58□□□□□ -1.68
SMARCA1-204ENST00000478420 LRRC3CA6NJW4 275 aa4.58□□□□□ -1.68
SMARCA1-204ENST00000478420 SKAP2O75563 359 aaPredicted RBP4.58□□□□□ -1.68
SMARCA1-204ENST00000478420 C1QL1O75973 258 aa4.58□□□□□ -1.68
SMARCA1-204ENST00000478420 PBX1P40424 430 aa4.58□□□□□ -1.68
SMARCA1-204ENST00000478420 TXNL4AP83876 142 aaKnown RBP4.58□□□□□ -1.68
SMARCA1-204ENST00000478420 ICA1Q05084 483 aa4.58□□□□□ -1.68
SMARCA1-204ENST00000478420 MTAPQ13126 283 aa4.58□□□□□ -1.68
SMARCA1-204ENST00000478420 PUM3Q15397 648 aaKnown RBP4.58□□□□□ -1.68
SMARCA1-204ENST00000478420 RNASE12Q5GAN4 147 aaKnown RBP4.58□□□□□ -1.68
SMARCA1-204ENST00000478420 TMEM63BQ5T3F8 832 aa4.58□□□□□ -1.68
SMARCA1-204ENST00000478420 C10orf62Q5T681 223 aaPredicted RBP4.58□□□□□ -1.68
SMARCA1-204ENST00000478420 KIRREL2Q6UWL6 708 aa4.58□□□□□ -1.68
SMARCA1-204ENST00000478420 RD3Q7Z3Z2 195 aa4.58□□□□□ -1.68
SMARCA1-204ENST00000478420 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.58□□□□□ -1.68
SMARCA1-204ENST00000478420 PNPLA1Q8N8W4 532 aa4.58□□□□□ -1.68
SMARCA1-204ENST00000478420 REPS1Q96D71 796 aa4.58□□□□□ -1.68
SMARCA1-204ENST00000478420 MMS19Q96T76 1030 aa4.58□□□□□ -1.68
SMARCA1-204ENST00000478420 R3HDMLQ9H3Y0 253 aa4.58□□□□□ -1.68
SMARCA1-204ENST00000478420 TMEM8AQ9HCN3 771 aa4.58□□□□□ -1.68
SMARCA1-204ENST00000478420 IGSF9Q9P2J2 1179 aa4.58□□□□□ -1.68
SMARCA1-204ENST00000478420 DTNAQ9Y4J8 743 aa4.58□□□□□ -1.68
SMARCA1-204ENST00000478420 AQP12BA6NM10 295 aa4.57□□□□□ -1.68
SMARCA1-204ENST00000478420 H7C1Q1 480 aa4.57□□□□□ -1.68
SMARCA1-204ENST00000478420 SUV39H1O43463 412 aa4.57□□□□□ -1.68
SMARCA1-204ENST00000478420 CBFA2T3O75081 653 aa4.57□□□□□ -1.68
SMARCA1-204ENST00000478420 ZNF37AP17032 561 aaPredicted RBP4.57□□□□□ -1.68
SMARCA1-204ENST00000478420 DRD1P21728 446 aa4.57□□□□□ -1.68
SMARCA1-204ENST00000478420 RENBPP51606 427 aa4.57□□□□□ -1.68
SMARCA1-204ENST00000478420 COPB1P53618 953 aaKnown RBP4.57□□□□□ -1.68
SMARCA1-204ENST00000478420 DEUP1Q05D60 604 aa4.57□□□□□ -1.68
SMARCA1-204ENST00000478420 SPARCL1Q14515 664 aa4.57□□□□□ -1.68
SMARCA1-204ENST00000478420 P3H1Q32P28 736 aa4.57□□□□□ -1.68
SMARCA1-204ENST00000478420 AASDHQ4L235 1098 aaPredicted RBP4.57□□□□□ -1.68
SMARCA1-204ENST00000478420 TMEM196Q5HYL7 178 aa4.57□□□□□ -1.68
SMARCA1-204ENST00000478420 FCRLBQ6BAA4 426 aa4.57□□□□□ -1.68
SMARCA1-204ENST00000478420 GRHL2Q6ISB3 625 aa4.57□□□□□ -1.68
SMARCA1-204ENST00000478420 SERPINA13PQ6UXR4 307 aa4.57□□□□□ -1.68
SMARCA1-204ENST00000478420 BCDIN3DQ7Z5W3 292 aaKnown RBP4.57□□□□□ -1.68
SMARCA1-204ENST00000478420 PRIMA1Q86XR5 153 aa4.57□□□□□ -1.68
SMARCA1-204ENST00000478420 GATAD2AQ86YP4 633 aa4.57□□□□□ -1.68
SMARCA1-204ENST00000478420 FAM71DQ8N9W8 422 aa4.57□□□□□ -1.68
SMARCA1-204ENST00000478420 FYTTD1Q96QD9 318 aaKnown RBP4.57□□□□□ -1.68
SMARCA1-204ENST00000478420 EIF3CQ99613 913 aaKnown RBP4.57□□□□□ -1.68
SMARCA1-204ENST00000478420 PRPF18Q99633 342 aaKnown RBP4.57□□□□□ -1.68
SMARCA1-204ENST00000478420 CINPQ9BW66 212 aaPredicted RBP4.57□□□□□ -1.68
SMARCA1-204ENST00000478420 USP29Q9HBJ7 922 aa4.57□□□□□ -1.68
SMARCA1-204ENST00000478420 ASAP1Q9ULH1 1129 aa4.57□□□□□ -1.68
SMARCA1-204ENST00000478420 COX11Q9Y6N1 276 aa4.57□□□□□ -1.68
SMARCA1-204ENST00000478420 PNMA6EA0A0J9YXQ4 647 aa4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 LGALS16A8MUM7 142 aa4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 J3KTA2 159 aa4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 SMIM22K7EJ46 135 aa4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 CA12O43570 354 aa4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 PPFIA2O75334 1257 aa4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 GCATO75600 419 aa4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 USP1O94782 785 aa4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 NTSR2O95665 410 aa4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 MT-CO3P00414 261 aa4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 C1RP00736 705 aa4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 NPPBP16860 134 aa4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 GSTM5P46439 218 aa4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 ALDH18A1P54886 795 aaKnown RBP4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 CCDC15Q0P6D6 951 aa4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 BFSP2Q13515 415 aa4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 CSHL1Q14406 222 aa4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 KCNJ12Q14500 433 aa4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 KRT72Q14CN4 511 aa4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 ELF2Q15723 593 aa4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 PFKFB4Q16877 469 aa4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 TRIM71Q2Q1W2 868 aaKnown RBP4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 ZACNQ401N2 412 aa4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 C4orf46Q504U0 113 aa4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 DNAJC10Q8IXB1 793 aa4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 C12orf76Q8N812 135 aaPredicted RBP4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 FAM71BQ8TC56 605 aa4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 OVCA2Q8WZ82 227 aa4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 HS6ST2Q96MM7 605 aa4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 CRAMP1Q96RY5 1269 aa4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 EPS8L2Q9H6S3 715 aa4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 OBP2BQ9NPH6 170 aa4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 SERGEFQ9UGK8 458 aa4.56□□□□□ -1.68
SMARCA1-204ENST00000478420 UBE2Q2LH0YL09 131 aa4.55□□□□□ -1.68
SMARCA1-204ENST00000478420 PCDH17O14917 1159 aa4.55□□□□□ -1.68
SMARCA1-204ENST00000478420 NPC1O15118 1278 aa4.55□□□□□ -1.68
SMARCA1-204ENST00000478420 APEHP13798 732 aaKnown RBP4.55□□□□□ -1.68
SMARCA1-204ENST00000478420 PDIA3P30101 505 aaKnown RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms