RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 KLHDC10Q6PID8 442 aa17.62■□□□□ 0.41
TRIM13-208ENST00000478111 Q6ZNB5 142 aa17.62■□□□□ 0.41
TRIM13-208ENST00000478111 TOGARAM2Q6ZUX3 1019 aa17.62■□□□□ 0.41
TRIM13-208ENST00000478111 TRMT11Q7Z4G4 463 aaKnown RBP17.62■□□□□ 0.41
TRIM13-208ENST00000478111 SCD5Q86SK9 330 aa17.62■□□□□ 0.41
TRIM13-208ENST00000478111 PGBD3Q8N328 593 aa17.62■□□□□ 0.41
TRIM13-208ENST00000478111 NT5C1AQ9BXI3 368 aa17.62■□□□□ 0.41
TRIM13-208ENST00000478111 CYP3A43Q9HB55 503 aa17.62■□□□□ 0.41
TRIM13-208ENST00000478111 PNPLA8Q9NP80 782 aa17.62■□□□□ 0.41
TRIM13-208ENST00000478111 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.62■□□□□ 0.41
TRIM13-208ENST00000478111 PILRBQ9UKJ0 227 aa17.62■□□□□ 0.41
TRIM13-208ENST00000478111 NUDT5Q9UKK9 219 aa17.62■□□□□ 0.41
TRIM13-208ENST00000478111 DSPP15924 2871 aaKnown RBP17.62■□□□□ 0.41
TRIM13-208ENST00000478111 A0A1W2PQH9 124 aa17.61■□□□□ 0.41
TRIM13-208ENST00000478111 NEDD8-MDP1E9PL57 170 aa17.61■□□□□ 0.41
TRIM13-208ENST00000478111 CILPO75339 1184 aa17.61■□□□□ 0.41
TRIM13-208ENST00000478111 CISD3P0C7P0 127 aa17.61■□□□□ 0.41
TRIM13-208ENST00000478111 RARGP13631 454 aa17.61■□□□□ 0.41
TRIM13-208ENST00000478111 CEACAM1P13688 526 aa17.61■□□□□ 0.41
TRIM13-208ENST00000478111 HOXB2P14652 356 aa17.61■□□□□ 0.41
TRIM13-208ENST00000478111 ITPKAP23677 461 aa17.61■□□□□ 0.41
TRIM13-208ENST00000478111 KIF11P52732 1056 aa17.61■□□□□ 0.41
TRIM13-208ENST00000478111 ZNF252P-AS1Q0IIN9 211 aa17.61■□□□□ 0.41
TRIM13-208ENST00000478111 KIAA1211LQ6NV74 962 aa17.61■□□□□ 0.41
TRIM13-208ENST00000478111 SLC23A3Q6PIS1 610 aa17.61■□□□□ 0.41
TRIM13-208ENST00000478111 TPGS1Q6ZTW0 290 aa17.61■□□□□ 0.41
TRIM13-208ENST00000478111 ZNF276Q8N554 614 aa17.61■□□□□ 0.41
TRIM13-208ENST00000478111 JAKMIP2Q96AA8 810 aa17.61■□□□□ 0.41
TRIM13-208ENST00000478111 BBS2Q9BXC9 721 aa17.61■□□□□ 0.41
TRIM13-208ENST00000478111 DNAJC17Q9NVM6 304 aaKnown RBP17.61■□□□□ 0.41
TRIM13-208ENST00000478111 CALCOCO1Q9P1Z2 691 aa17.61■□□□□ 0.41
TRIM13-208ENST00000478111 PCDHA5Q9Y5H7 936 aa17.61■□□□□ 0.41
TRIM13-208ENST00000478111 ENGP17813 658 aa17.6■□□□□ 0.41
TRIM13-208ENST00000478111 NR2F2P24468 414 aa17.6■□□□□ 0.41
TRIM13-208ENST00000478111 NDUFA8P51970 172 aa17.6■□□□□ 0.41
TRIM13-208ENST00000478111 ENPEPQ07075 957 aa17.6■□□□□ 0.41
TRIM13-208ENST00000478111 DPYDQ12882 1025 aa17.6■□□□□ 0.41
TRIM13-208ENST00000478111 LMAN2Q12907 356 aa17.6■□□□□ 0.41
TRIM13-208ENST00000478111 UAP1L1Q3KQV9 507 aa17.6■□□□□ 0.41
TRIM13-208ENST00000478111 PPP1R26Q5T8A7 1209 aaPredicted RBP17.6■□□□□ 0.41
TRIM13-208ENST00000478111 LYSMD4Q5XG99 296 aa17.6■□□□□ 0.41
TRIM13-208ENST00000478111 NUDT18Q6ZVK8 323 aa17.6■□□□□ 0.41
TRIM13-208ENST00000478111 INTS8Q75QN2 995 aaKnown RBP17.6■□□□□ 0.41
TRIM13-208ENST00000478111 XPO6Q96QU8 1125 aaKnown RBP17.6■□□□□ 0.41
TRIM13-208ENST00000478111 GABRG3Q99928 467 aa17.6■□□□□ 0.41
TRIM13-208ENST00000478111 NUSAP1Q9BXS6 441 aaKnown RBP17.6■□□□□ 0.41
TRIM13-208ENST00000478111 WDR35Q9P2L0 1181 aa17.6■□□□□ 0.41
TRIM13-208ENST00000478111 LSM7Q9UK45 103 aaKnown RBP17.6■□□□□ 0.41
TRIM13-208ENST00000478111 FBXO10Q9UK96 956 aa17.6■□□□□ 0.41
TRIM13-208ENST00000478111 MAPK8IP1Q9UQF2 711 aa17.6■□□□□ 0.41
TRIM13-208ENST00000478111 USP3Q9Y6I4 520 aa17.6■□□□□ 0.41
TRIM13-208ENST00000478111 ATXN2Q99700 1313 aaKnown RBP17.6■□□□□ 0.41
TRIM13-208ENST00000478111 FAM208BQ5VWN6 2430 aa17.6■□□□□ 0.41
TRIM13-208ENST00000478111 ZFYVE26Q68DK2 2539 aa17.6■□□□□ 0.41
TRIM13-208ENST00000478111 IGHV1OR15-9A0A0B4J2B8 117 aa17.59■□□□□ 0.41
TRIM13-208ENST00000478111 STC2O76061 302 aa17.59■□□□□ 0.41
TRIM13-208ENST00000478111 TOP3BO95985 862 aaKnown RBP17.59■□□□□ 0.41
TRIM13-208ENST00000478111 KLKB1P03952 638 aa17.59■□□□□ 0.41
TRIM13-208ENST00000478111 CD58P19256 250 aa17.59■□□□□ 0.41
TRIM13-208ENST00000478111 NDUFV2P19404 249 aa17.59■□□□□ 0.41
TRIM13-208ENST00000478111 SYKP43405 635 aa17.59■□□□□ 0.41
TRIM13-208ENST00000478111 PLA2G4AP47712 749 aa17.59■□□□□ 0.41
TRIM13-208ENST00000478111 ZCWPW2Q504Y3 356 aa17.59■□□□□ 0.41
TRIM13-208ENST00000478111 CCDC186Q7Z3E2 898 aa17.59■□□□□ 0.41
TRIM13-208ENST00000478111 GUF1Q8N442 669 aaKnown RBP17.59■□□□□ 0.41
TRIM13-208ENST00000478111 DEFB119Q8N690 84 aa17.59■□□□□ 0.41
TRIM13-208ENST00000478111 IPO4Q8TEX9 1081 aaKnown RBP17.59■□□□□ 0.41
TRIM13-208ENST00000478111 SPATA32Q96LK8 384 aa17.59■□□□□ 0.41
TRIM13-208ENST00000478111 DUSP16Q9BY84 665 aa17.59■□□□□ 0.41
TRIM13-208ENST00000478111 NIF3L1Q9GZT8 377 aa17.59■□□□□ 0.41
TRIM13-208ENST00000478111 DNMT3LQ9UJW3 386 aa17.59■□□□□ 0.41
TRIM13-208ENST00000478111 AP5Z1O43299 807 aa17.58■□□□□ 0.4
TRIM13-208ENST00000478111 PROS1P07225 676 aa17.58■□□□□ 0.4
TRIM13-208ENST00000478111 HOXD12P35452 270 aa17.58■□□□□ 0.4
TRIM13-208ENST00000478111 PSMC2P35998 433 aaKnown RBP17.58■□□□□ 0.4
TRIM13-208ENST00000478111 MAPK8P45983 427 aa17.58■□□□□ 0.4
TRIM13-208ENST00000478111 RPL6Q02878 288 aaKnown RBP17.58■□□□□ 0.4
TRIM13-208ENST00000478111 GOLGA8FQ08AF8 430 aa17.58■□□□□ 0.4
TRIM13-208ENST00000478111 GOLGA8DPQ0D2H9 430 aa17.58■□□□□ 0.4
TRIM13-208ENST00000478111 ADAM9Q13443 819 aa17.58■□□□□ 0.4
TRIM13-208ENST00000478111 C10orf120Q5SQS8 335 aa17.58■□□□□ 0.4
TRIM13-208ENST00000478111 SLC36A4Q6YBV0 504 aa17.58■□□□□ 0.4
TRIM13-208ENST00000478111 SLC41A1Q8IVJ1 513 aa17.58■□□□□ 0.4
TRIM13-208ENST00000478111 FAM186BQ8IYM0 893 aa17.58■□□□□ 0.4
TRIM13-208ENST00000478111 CHPFQ8IZ52 775 aa17.58■□□□□ 0.4
TRIM13-208ENST00000478111 DEFB124Q8NES8 71 aa17.58■□□□□ 0.4
TRIM13-208ENST00000478111 SEMA4DQ92854 862 aa17.58■□□□□ 0.4
TRIM13-208ENST00000478111 ERLEC1Q96DZ1 483 aa17.58■□□□□ 0.4
TRIM13-208ENST00000478111 TMEM121BQ9BXQ6 578 aaPredicted RBP17.58■□□□□ 0.4
TRIM13-208ENST00000478111 IMPG2Q9BZV3 1241 aa17.58■□□□□ 0.4
TRIM13-208ENST00000478111 CAPN10Q9HC96 672 aa17.58■□□□□ 0.4
TRIM13-208ENST00000478111 CD93Q9NPY3 652 aa17.58■□□□□ 0.4
TRIM13-208ENST00000478111 FSCN3Q9NQT6 498 aa17.58■□□□□ 0.4
TRIM13-208ENST00000478111 PLK2Q9NYY3 685 aa17.58■□□□□ 0.4
TRIM13-208ENST00000478111 NAGPAQ9UK23 515 aa17.58■□□□□ 0.4
TRIM13-208ENST00000478111 RAD54BQ9Y620 910 aa17.58■□□□□ 0.4
TRIM13-208ENST00000478111 FREM2Q5SZK8 3169 aa17.57■□□□□ 0.4
TRIM13-208ENST00000478111 PKD1L2Q7Z442 2459 aa17.57■□□□□ 0.4
TRIM13-208ENST00000478111 C1QTNF9BB2RNN3 333 aa17.57■□□□□ 0.4
TRIM13-208ENST00000478111 WASH3PC4AMC7 463 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms