RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 WDR27A2RRH5 827 aa5.61□□□□□ -1.51
VPS50-214ENST00000477935 VWC2LB2RUY7 222 aa5.61□□□□□ -1.51
VPS50-214ENST00000477935 UBE2Q2LH0YL09 131 aa5.61□□□□□ -1.51
VPS50-214ENST00000477935 A1BGP04217 495 aa5.61□□□□□ -1.51
VPS50-214ENST00000477935 RHOP08100 348 aa5.61□□□□□ -1.51
VPS50-214ENST00000477935 ATXN1LP0C7T5 689 aaKnown RBP5.61□□□□□ -1.51
VPS50-214ENST00000477935 KITP10721 976 aa5.61□□□□□ -1.51
VPS50-214ENST00000477935 MRC1P22897 1456 aa5.61□□□□□ -1.51
VPS50-214ENST00000477935 CD6P30203 668 aa5.61□□□□□ -1.51
VPS50-214ENST00000477935 ARFIP2P53365 341 aa5.61□□□□□ -1.51
VPS50-214ENST00000477935 LOXL3P58215 753 aa5.61□□□□□ -1.51
VPS50-214ENST00000477935 VPS53Q5VIR6 699 aa5.61□□□□□ -1.51
VPS50-214ENST00000477935 STRIP1Q5VSL9 837 aa5.61□□□□□ -1.51
VPS50-214ENST00000477935 ZNF790Q6PG37 636 aa5.61□□□□□ -1.51
VPS50-214ENST00000477935 TMEM108Q6UXF1 575 aa5.61□□□□□ -1.51
VPS50-214ENST00000477935 PEG10Q86TG7 708 aaKnown RBP5.61□□□□□ -1.51
VPS50-214ENST00000477935 FAM136AQ96C01 138 aa5.61□□□□□ -1.51
VPS50-214ENST00000477935 TESK2Q96S53 571 aa5.61□□□□□ -1.51
VPS50-214ENST00000477935 DUSP26Q9BV47 211 aa5.61□□□□□ -1.51
VPS50-214ENST00000477935 ACTRT3Q9BYD9 372 aa5.61□□□□□ -1.51
VPS50-214ENST00000477935 TRIM54Q9BYV2 358 aa5.61□□□□□ -1.51
VPS50-214ENST00000477935 AMBRA1Q9C0C7 1298 aa5.61□□□□□ -1.51
VPS50-214ENST00000477935 KLC4Q9NSK0 619 aa5.61□□□□□ -1.51
VPS50-214ENST00000477935 GGA3Q9NZ52 723 aa5.61□□□□□ -1.51
VPS50-214ENST00000477935 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.61□□□□□ -1.51
VPS50-214ENST00000477935 INSL6Q9Y581 213 aa5.61□□□□□ -1.51
VPS50-214ENST00000477935 CACNA1SQ13698 1873 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 RBBP6Q7Z6E9 1792 aaKnown RBP5.6□□□□□ -1.51
VPS50-214ENST00000477935 HEG1Q9ULI3 1381 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 ADGRA2Q96PE1 1338 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 CCDC151A5D8V7 595 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 GOLGA6CA6NDK9 693 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 GOLGA6BA6NDN3 693 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 CAPN8A6NHC0 703 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 A6NNZ2 444 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 TCERG1O14776 1098 aaKnown RBP5.6□□□□□ -1.51
VPS50-214ENST00000477935 THP07101 528 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 GOLGA6DP0CG33 693 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 VIPR2P41587 438 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 GRIA3P42263 894 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 PTH2RP49190 550 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 SLC11A2P49281 568 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 PRMT2P55345 433 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 UCP3P55916 312 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 IQCB1Q15051 598 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 LLGL1Q15334 1064 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 ZNF362Q5T0B9 420 aaPredicted RBP5.6□□□□□ -1.51
VPS50-214ENST00000477935 FAM109BQ6ICB4 259 aaPredicted RBP5.6□□□□□ -1.51
VPS50-214ENST00000477935 SULT6B1Q6IMI4 303 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 LAYNQ6UX15 382 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 ARMC9Q7Z3E5 817 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 KIAA0319LQ8IZA0 1049 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 IL31RAQ8NI17 732 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 CD99L2Q8TCZ2 262 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 KBTBD7Q8WVZ9 684 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 FAM204AQ9H8W3 233 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 METTL14Q9HCE5 456 aaKnown RBP5.6□□□□□ -1.51
VPS50-214ENST00000477935 GOLGA6AQ9NYA3 693 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 XPR1Q9UBH6 696 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 DDX20Q9UHI6 824 aaKnown RBP5.6□□□□□ -1.51
VPS50-214ENST00000477935 TMX2Q9Y320 296 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 MUC3AQ02505 3323 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 SCN11AQ9UI33 1791 aa5.6□□□□□ -1.51
VPS50-214ENST00000477935 YDJCA8MPS7 323 aa5.59□□□□□ -1.51
VPS50-214ENST00000477935 VSTM5A8MXK1 200 aa5.59□□□□□ -1.51
VPS50-214ENST00000477935 PSMD14O00487 310 aa5.59□□□□□ -1.51
VPS50-214ENST00000477935 PXNP49023 591 aaPredicted RBP5.59□□□□□ -1.51
VPS50-214ENST00000477935 CACNA2D1P54289 1103 aa5.59□□□□□ -1.51
VPS50-214ENST00000477935 LILRA4P59901 499 aa5.59□□□□□ -1.51
VPS50-214ENST00000477935 CNN3Q15417 329 aaKnown RBP5.59□□□□□ -1.51
VPS50-214ENST00000477935 SFRP4Q6FHJ7 346 aaPredicted RBP5.59□□□□□ -1.51
VPS50-214ENST00000477935 ZNF783Q6ZMS7 281 aa5.59□□□□□ -1.51
VPS50-214ENST00000477935 UBE2Q1Q7Z7E8 422 aa5.59□□□□□ -1.51
VPS50-214ENST00000477935 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.59□□□□□ -1.51
VPS50-214ENST00000477935 OR6B3Q8NGW1 331 aa5.59□□□□□ -1.51
VPS50-214ENST00000477935 ANKS1AQ92625 1134 aa5.59□□□□□ -1.51
VPS50-214ENST00000477935 SNX27Q96L92 541 aa5.59□□□□□ -1.51
VPS50-214ENST00000477935 MOGAT1Q96PD6 335 aa5.59□□□□□ -1.51
VPS50-214ENST00000477935 NELL2Q99435 816 aa5.59□□□□□ -1.51
VPS50-214ENST00000477935 ALG8Q9BVK2 526 aa5.59□□□□□ -1.51
VPS50-214ENST00000477935 C22orf23Q9BZE7 217 aa5.59□□□□□ -1.51
VPS50-214ENST00000477935 KIAA1586Q9HCI6 787 aa5.59□□□□□ -1.51
VPS50-214ENST00000477935 L1RE1Q9UN81 338 aa5.59□□□□□ -1.51
VPS50-214ENST00000477935 PAPPA2Q9BXP8 1791 aa5.59□□□□□ -1.51
VPS50-214ENST00000477935 ERVV-1B6SEH8 477 aa5.58□□□□□ -1.52
VPS50-214ENST00000477935 MYO1CO00159 1063 aa5.58□□□□□ -1.52
VPS50-214ENST00000477935 BTN3A1O00481 513 aa5.58□□□□□ -1.52
VPS50-214ENST00000477935 ORC4O43929 436 aa5.58□□□□□ -1.52
VPS50-214ENST00000477935 WDHD1O75717 1129 aaPredicted RBP5.58□□□□□ -1.52
VPS50-214ENST00000477935 SLC7A1P30825 629 aa5.58□□□□□ -1.52
VPS50-214ENST00000477935 TEFQ10587 303 aa5.58□□□□□ -1.52
VPS50-214ENST00000477935 CTBP1Q13363 440 aa5.58□□□□□ -1.52
VPS50-214ENST00000477935 GFOD2Q3B7J2 385 aa5.58□□□□□ -1.52
VPS50-214ENST00000477935 ICE2Q659A1 982 aa5.58□□□□□ -1.52
VPS50-214ENST00000477935 LMBRD2Q68DH5 695 aaPredicted RBP5.58□□□□□ -1.52
VPS50-214ENST00000477935 Q7L0L9 218 aa5.58□□□□□ -1.52
VPS50-214ENST00000477935 C14orf80Q86SX3 495 aa5.58□□□□□ -1.52
VPS50-214ENST00000477935 PRIMA1Q86XR5 153 aa5.58□□□□□ -1.52
VPS50-214ENST00000477935 SLC15A4Q8N697 577 aa5.58□□□□□ -1.52
VPS50-214ENST00000477935 RFKQ969G6 155 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms