RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 GOLGA1Q92805 767 aa20.86■□□□□ 0.93
ACTB-210ENST00000477812 SMARCD2Q92925 531 aa20.86■□□□□ 0.93
ACTB-210ENST00000477812 ARHGEF26Q96DR7 871 aa20.86■□□□□ 0.93
ACTB-210ENST00000477812 CDK5RAP1Q96SZ6 601 aaKnown RBP20.86■□□□□ 0.93
ACTB-210ENST00000477812 SLITRK6Q9H5Y7 841 aa20.86■□□□□ 0.93
ACTB-210ENST00000477812 CNOT8Q9UFF9 292 aaKnown RBP20.86■□□□□ 0.93
ACTB-210ENST00000477812 ARHGAP26Q9UNA1 814 aa20.86■□□□□ 0.93
ACTB-210ENST00000477812 ANKRD62A6NC57 917 aa20.85■□□□□ 0.93
ACTB-210ENST00000477812 SIGLEC16A6NMB1 481 aa20.85■□□□□ 0.93
ACTB-210ENST00000477812 IGLV3-25P01717 112 aa20.85■□□□□ 0.93
ACTB-210ENST00000477812 H2AFZP0C0S5 128 aa20.85■□□□□ 0.93
ACTB-210ENST00000477812 ABCB4P21439 1286 aa20.85■□□□□ 0.93
ACTB-210ENST00000477812 GBP2P32456 591 aaPredicted RBP20.85■□□□□ 0.93
ACTB-210ENST00000477812 PITX1P78337 314 aaPredicted RBP20.85■□□□□ 0.93
ACTB-210ENST00000477812 CCDC173Q0VFZ6 552 aa20.85■□□□□ 0.93
ACTB-210ENST00000477812 C10orf120Q5SQS8 335 aa20.85■□□□□ 0.93
ACTB-210ENST00000477812 H2AFVQ71UI9 128 aa20.85■□□□□ 0.93
ACTB-210ENST00000477812 DEFB106AQ8N104 65 aa20.85■□□□□ 0.93
ACTB-210ENST00000477812 TDRD5Q8NAT2 981 aaKnown RBP20.85■□□□□ 0.93
ACTB-210ENST00000477812 RIN3Q8TB24 985 aa20.85■□□□□ 0.93
ACTB-210ENST00000477812 DQX1Q8TE96 717 aaKnown RBP20.85■□□□□ 0.93
ACTB-210ENST00000477812 USP13Q92995 863 aaPredicted RBP20.85■□□□□ 0.93
ACTB-210ENST00000477812 NT5C3BQ969T7 300 aa20.85■□□□□ 0.93
ACTB-210ENST00000477812 RSPRY1Q96DX4 576 aa20.85■□□□□ 0.93
ACTB-210ENST00000477812 ASB2Q96Q27 587 aa20.85■□□□□ 0.93
ACTB-210ENST00000477812 ADAM33Q9BZ11 813 aa20.85■□□□□ 0.93
ACTB-210ENST00000477812 SMG9Q9H0W8 520 aaKnown RBP20.85■□□□□ 0.93
ACTB-210ENST00000477812 SMOC2Q9H3U7 446 aa20.85■□□□□ 0.93
ACTB-210ENST00000477812 OLA1Q9NTK5 396 aaKnown RBP20.85■□□□□ 0.93
ACTB-210ENST00000477812 CCL26Q9Y258 94 aa20.85■□□□□ 0.93
ACTB-210ENST00000477812 HELZP42694 1942 aaKnown RBP20.84■□□□□ 0.93
ACTB-210ENST00000477812 C2CD4BA6NLJ0 364 aa20.84■□□□□ 0.93
ACTB-210ENST00000477812 LOC730098B7Z3J9 87 aa20.84■□□□□ 0.93
ACTB-210ENST00000477812 ANHXE9PGG2 379 aa20.84■□□□□ 0.93
ACTB-210ENST00000477812 CKMP06732 381 aa20.84■□□□□ 0.93
ACTB-210ENST00000477812 TMEM253P0C7T8 217 aa20.84■□□□□ 0.93
ACTB-210ENST00000477812 KRT3P12035 628 aa20.84■□□□□ 0.93
ACTB-210ENST00000477812 BMP1P13497 986 aa20.84■□□□□ 0.93
ACTB-210ENST00000477812 NCAM1P13591 858 aa20.84■□□□□ 0.93
ACTB-210ENST00000477812 SP100P23497 879 aaPredicted RBP20.84■□□□□ 0.93
ACTB-210ENST00000477812 RFC1P35251 1148 aaPredicted RBP20.84■□□□□ 0.93
ACTB-210ENST00000477812 ATP5C1P36542 298 aaKnown RBP20.84■□□□□ 0.93
ACTB-210ENST00000477812 MATKP42679 507 aa20.84■□□□□ 0.93
ACTB-210ENST00000477812 ZP2Q05996 745 aa20.84■□□□□ 0.93
ACTB-210ENST00000477812 EIF4EBP2Q13542 120 aaPredicted RBP20.84■□□□□ 0.93
ACTB-210ENST00000477812 C10orf76Q5T2E6 689 aa20.84■□□□□ 0.93
ACTB-210ENST00000477812 RSRC2Q7L4I2 434 aaKnown RBP20.84■□□□□ 0.93
ACTB-210ENST00000477812 TADA2BQ86TJ2 420 aa20.84■□□□□ 0.93
ACTB-210ENST00000477812 TAC4Q86UU9 113 aa20.84■□□□□ 0.93
ACTB-210ENST00000477812 ZDHHC14Q8IZN3 488 aa20.84■□□□□ 0.93
ACTB-210ENST00000477812 EMC1Q8N766 993 aa20.84■□□□□ 0.93
ACTB-210ENST00000477812 ADAMTS19Q8TE59 1207 aa20.84■□□□□ 0.93
ACTB-210ENST00000477812 RNF139Q8WU17 664 aa20.84■□□□□ 0.93
ACTB-210ENST00000477812 DDX23Q9BUQ8 820 aaKnown RBP20.84■□□□□ 0.93
ACTB-210ENST00000477812 KLF16Q9BXK1 252 aaPredicted RBP20.84■□□□□ 0.93
ACTB-210ENST00000477812 PARVAQ9NVD7 372 aa20.84■□□□□ 0.93
ACTB-210ENST00000477812 DNMT3LQ9UJW3 386 aa20.84■□□□□ 0.93
ACTB-210ENST00000477812 INTUQ9ULD6 942 aa20.84■□□□□ 0.93
ACTB-210ENST00000477812 NOS2P35228 1153 aa20.83■□□□□ 0.93
ACTB-210ENST00000477812 AVPR1AP37288 418 aa20.83■□□□□ 0.93
ACTB-210ENST00000477812 RNASE9P60153 205 aaKnown RBP20.83■□□□□ 0.93
ACTB-210ENST00000477812 RPL7AP62424 266 aaKnown RBP20.83■□□□□ 0.93
ACTB-210ENST00000477812 GPC5P78333 572 aa20.83■□□□□ 0.93
ACTB-210ENST00000477812 EFEMP1Q12805 493 aa20.83■□□□□ 0.93
ACTB-210ENST00000477812 HTR4Q13639 388 aa20.83■□□□□ 0.93
ACTB-210ENST00000477812 DCAF6Q58WW2 860 aa20.83■□□□□ 0.93
ACTB-210ENST00000477812 BNIPLQ7Z465 357 aa20.83■□□□□ 0.93
ACTB-210ENST00000477812 ADHFE1Q8IWW8 467 aa20.83■□□□□ 0.93
ACTB-210ENST00000477812 ACSF2Q96CM8 615 aaPredicted RBP20.83■□□□□ 0.93
ACTB-210ENST00000477812 RPGRIP1Q96KN7 1286 aa20.83■□□□□ 0.93
ACTB-210ENST00000477812 LRRC3BQ96PB8 259 aa20.83■□□□□ 0.93
ACTB-210ENST00000477812 MCEEQ96PE7 176 aa20.83■□□□□ 0.93
ACTB-210ENST00000477812 NPY6RQ99463 290 aa20.83■□□□□ 0.93
ACTB-210ENST00000477812 SELENOOQ9BVL4 669 aa20.83■□□□□ 0.93
ACTB-210ENST00000477812 KCNF1Q9H3M0 494 aa20.83■□□□□ 0.93
ACTB-210ENST00000477812 TDP1Q9NUW8 608 aa20.83■□□□□ 0.93
ACTB-210ENST00000477812 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.83■□□□□ 0.931e-16■■□□□ 13.4
ACTB-210ENST00000477812 MARCH2Q9P0N8 246 aa20.83■□□□□ 0.93
ACTB-210ENST00000477812 CALCOCO1Q9P1Z2 691 aa20.83■□□□□ 0.93
ACTB-210ENST00000477812 PRKAG3Q9UGI9 489 aa20.83■□□□□ 0.93
ACTB-210ENST00000477812 NR2E1Q9Y466 385 aa20.83■□□□□ 0.93
ACTB-210ENST00000477812 PCDHA13Q9Y5I0 950 aa20.83■□□□□ 0.93
ACTB-210ENST00000477812 CPQQ9Y646 472 aa20.83■□□□□ 0.93
ACTB-210ENST00000477812 TMEM191CA6NGB0 347 aa20.82■□□□□ 0.92
ACTB-210ENST00000477812 ARHGAP6O43182 974 aa20.82■□□□□ 0.92
ACTB-210ENST00000477812 MBL2P11226 248 aaPredicted RBP20.82■□□□□ 0.92
ACTB-210ENST00000477812 TCF3P15923 654 aa20.82■□□□□ 0.92
ACTB-210ENST00000477812 TFE3P19532 575 aaPredicted RBP20.82■□□□□ 0.92
ACTB-210ENST00000477812 VIPR2P41587 438 aa20.82■□□□□ 0.92
ACTB-210ENST00000477812 MAGEA1P43355 309 aa20.82■□□□□ 0.92
ACTB-210ENST00000477812 OGDHQ02218 1023 aa20.82■□□□□ 0.92
ACTB-210ENST00000477812 USP4Q13107 963 aa20.82■□□□□ 0.92
ACTB-210ENST00000477812 SPA17Q15506 151 aa20.82■□□□□ 0.92
ACTB-210ENST00000477812 PARM1Q6UWI2 310 aa20.82■□□□□ 0.92
ACTB-210ENST00000477812 ACRBPQ8NEB7 543 aa20.82■□□□□ 0.92
ACTB-210ENST00000477812 TRIM7Q9C029 511 aa20.82■□□□□ 0.92
ACTB-210ENST00000477812 SMPD4Q9NXE4 827 aa20.82■□□□□ 0.92
ACTB-210ENST00000477812 SFMBT1Q9UHJ3 866 aa20.82■□□□□ 0.92
ACTB-210ENST00000477812 RASAL2Q9UJF2 1139 aa20.82■□□□□ 0.92
ACTB-210ENST00000477812 SCINQ9Y6U3 715 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms