RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 CHRM1P11229 460 aaPredicted RBP18.52■□□□□ 0.56
PTPN7-209ENST00000477554 ATP5C1P36542 298 aaKnown RBP18.52■□□□□ 0.56
PTPN7-209ENST00000477554 UBASH3AP57075 661 aa18.52■□□□□ 0.56
PTPN7-209ENST00000477554 NAT16Q8N8M0 369 aa18.52■□□□□ 0.56
PTPN7-209ENST00000477554 CD101Q93033 1021 aa18.52■□□□□ 0.56
PTPN7-209ENST00000477554 MSANTD3Q96H12 275 aa18.52■□□□□ 0.56
PTPN7-209ENST00000477554 HESX1Q9UBX0 185 aa18.52■□□□□ 0.56
PTPN7-209ENST00000477554 RASAL2Q9UJF2 1139 aa18.52■□□□□ 0.56
PTPN7-209ENST00000477554 SH3BP1Q9Y3L3 701 aa18.52■□□□□ 0.56
PTPN7-209ENST00000477554 STC2O76061 302 aa18.51■□□□□ 0.55
PTPN7-209ENST00000477554 USP8P40818 1118 aa18.51■□□□□ 0.55
PTPN7-209ENST00000477554 PXNP49023 591 aaPredicted RBP18.51■□□□□ 0.55
PTPN7-209ENST00000477554 COPB1P53618 953 aaKnown RBP18.51■□□□□ 0.55
PTPN7-209ENST00000477554 SEC13P55735 322 aa18.51■□□□□ 0.55
PTPN7-209ENST00000477554 TRIM5Q9C035 493 aa18.51■□□□□ 0.55
PTPN7-209ENST00000477554 SFMBT1Q9UHJ3 866 aa18.51■□□□□ 0.55
PTPN7-209ENST00000477554 DNAJC12Q9UKB3 198 aa18.51■□□□□ 0.55
PTPN7-209ENST00000477554 FHOD1Q9Y613 1164 aa18.51■□□□□ 0.55
PTPN7-209ENST00000477554 PRR23AA6NEV1 266 aa18.5■□□□□ 0.55
PTPN7-209ENST00000477554 PROB1E7EW31 1015 aa18.5■□□□□ 0.55
PTPN7-209ENST00000477554 K7EQS6 105 aa18.5■□□□□ 0.55
PTPN7-209ENST00000477554 MSI1O43347 362 aaKnown RBP18.5■□□□□ 0.55
PTPN7-209ENST00000477554 GPD2P43304 727 aa18.5■□□□□ 0.55
PTPN7-209ENST00000477554 MAGEA9P43362 315 aa18.5■□□□□ 0.55
PTPN7-209ENST00000477554 DAOAP59103 153 aa18.5■□□□□ 0.55
PTPN7-209ENST00000477554 KDSRQ06136 332 aa18.5■□□□□ 0.55
PTPN7-209ENST00000477554 GRSF1Q12849 480 aaKnown RBP eCLIP18.5■□□□□ 0.55
PTPN7-209ENST00000477554 SRSF5Q13243 272 aaKnown RBP18.5■□□□□ 0.55
PTPN7-209ENST00000477554 EMC10Q5UCC4 262 aa18.5■□□□□ 0.55
PTPN7-209ENST00000477554 Q6ZNB5 142 aa18.5■□□□□ 0.55
PTPN7-209ENST00000477554 TPGS1Q6ZTW0 290 aa18.5■□□□□ 0.55
PTPN7-209ENST00000477554 APTXQ7Z2E3 356 aaKnown RBP18.5■□□□□ 0.55
PTPN7-209ENST00000477554 PHTF2Q8N3S3 785 aa18.5■□□□□ 0.55
PTPN7-209ENST00000477554 ZNF606Q8WXB4 792 aa18.5■□□□□ 0.55
PTPN7-209ENST00000477554 KCTD13Q8WZ19 329 aa18.5■□□□□ 0.55
PTPN7-209ENST00000477554 SHC3Q92529 594 aa18.5■□□□□ 0.55
PTPN7-209ENST00000477554 NELL1Q92832 810 aa18.5■□□□□ 0.55
PTPN7-209ENST00000477554 BHMTQ93088 406 aa18.5■□□□□ 0.55
PTPN7-209ENST00000477554 PIWIL1Q96J94 861 aaKnown RBP18.5■□□□□ 0.55
PTPN7-209ENST00000477554 MIS12Q9H081 205 aa18.5■□□□□ 0.55
PTPN7-209ENST00000477554 VPS16Q9H269 839 aa18.5■□□□□ 0.55
PTPN7-209ENST00000477554 LRRC4Q9HBW1 653 aa18.5■□□□□ 0.55
PTPN7-209ENST00000477554 CLIC5Q9NZA1 410 aa18.5■□□□□ 0.55
PTPN7-209ENST00000477554 DNMT3LQ9UJW3 386 aa18.5■□□□□ 0.55
PTPN7-209ENST00000477554 KIAA1257Q9ULG3 409 aa18.5■□□□□ 0.55
PTPN7-209ENST00000477554 PIEZO1Q92508 2521 aa18.5■□□□□ 0.55
PTPN7-209ENST00000477554 A0A1B0GTH6 734 aa18.49■□□□□ 0.55
PTPN7-209ENST00000477554 GTPBP10A4D1E9 387 aaKnown RBP18.49■□□□□ 0.55
PTPN7-209ENST00000477554 FOXN3O00409 490 aaPredicted RBP18.49■□□□□ 0.55
PTPN7-209ENST00000477554 PES1O00541 588 aaKnown RBP18.49■□□□□ 0.55
PTPN7-209ENST00000477554 EPHB6O15197 1021 aa18.49■□□□□ 0.55
PTPN7-209ENST00000477554 SETSIPP0DME0 302 aa18.49■□□□□ 0.55
PTPN7-209ENST00000477554 ADH5P11766 374 aa18.49■□□□□ 0.55
PTPN7-209ENST00000477554 GNA15P30679 374 aa18.49■□□□□ 0.55
PTPN7-209ENST00000477554 CLCN1P35523 988 aa18.49■□□□□ 0.55
PTPN7-209ENST00000477554 LRRC32Q14392 662 aa18.49■□□□□ 0.55
PTPN7-209ENST00000477554 DGKKQ5KSL6 1271 aa18.49■□□□□ 0.55
PTPN7-209ENST00000477554 BSPRYQ5W0U4 402 aa18.49■□□□□ 0.55
PTPN7-209ENST00000477554 HEATR6Q6AI08 1181 aaKnown RBP18.49■□□□□ 0.55
PTPN7-209ENST00000477554 HTR3DQ70Z44 454 aa18.49■□□□□ 0.55
PTPN7-209ENST00000477554 PASD1Q8IV76 773 aa18.49■□□□□ 0.55
PTPN7-209ENST00000477554 SPEM1Q8N4L4 309 aa18.49■□□□□ 0.55
PTPN7-209ENST00000477554 WDTC1Q8N5D0 677 aa18.49■□□□□ 0.55
PTPN7-209ENST00000477554 RPLP0P6Q8NHW5 317 aa18.49■□□□□ 0.55
PTPN7-209ENST00000477554 ANP32BQ92688 251 aaKnown RBP18.49■□□□□ 0.55
PTPN7-209ENST00000477554 PLCB1Q9NQ66 1216 aa18.49■□□□□ 0.55
PTPN7-209ENST00000477554 IFNKQ9P0W0 207 aa18.49■□□□□ 0.55
PTPN7-209ENST00000477554 FBXO4Q9UKT5 387 aa18.49■□□□□ 0.55
PTPN7-209ENST00000477554 HCN2Q9UL51 889 aa18.49■□□□□ 0.55
PTPN7-209ENST00000477554 THAP12O43422 761 aa18.49■□□□□ 0.55
PTPN7-209ENST00000477554 GFRA3O60609 400 aa18.49■□□□□ 0.55
PTPN7-209ENST00000477554 FYNP06241 537 aa18.49■□□□□ 0.55
PTPN7-209ENST00000477554 CXCL12P48061 93 aa18.49■□□□□ 0.55
PTPN7-209ENST00000477554 MFAP3P55082 362 aa18.49■□□□□ 0.55
PTPN7-209ENST00000477554 KLHDC10Q6PID8 442 aa18.49■□□□□ 0.55
PTPN7-209ENST00000477554 SLC47A2Q86VL8 602 aa18.49■□□□□ 0.55
PTPN7-209ENST00000477554 DDX42Q86XP3 938 aaKnown RBP eCLIP18.49■□□□□ 0.55
PTPN7-209ENST00000477554 ETFBKMTQ8IXQ9 262 aa18.49■□□□□ 0.55
PTPN7-209ENST00000477554 LSM14BQ9BX40 385 aaKnown RBP18.49■□□□□ 0.55
PTPN7-209ENST00000477554 DNAI2Q9GZS0 605 aa18.49■□□□□ 0.55
PTPN7-209ENST00000477554 RTN4Q9NQC3 1192 aaKnown RBP18.49■□□□□ 0.55
PTPN7-209ENST00000477554 SPHK2Q9NRA0 654 aa18.49■□□□□ 0.55
PTPN7-209ENST00000477554 PLK2Q9NYY3 685 aa18.49■□□□□ 0.55
PTPN7-209ENST00000477554 MARCH2Q9P0N8 246 aa18.49■□□□□ 0.55
PTPN7-209ENST00000477554 EML5Q05BV3 1969 aa18.48■□□□□ 0.55
PTPN7-209ENST00000477554 GPR179Q6PRD1 2367 aa18.48■□□□□ 0.55
PTPN7-209ENST00000477554 SLC12A8A0AV02 714 aa18.48■□□□□ 0.55
PTPN7-209ENST00000477554 LGALS16A8MUM7 142 aa18.48■□□□□ 0.55
PTPN7-209ENST00000477554 CHURC1-FNTBB4DL54 471 aa18.48■□□□□ 0.55
PTPN7-209ENST00000477554 RALAP11233 206 aa18.48■□□□□ 0.55
PTPN7-209ENST00000477554 HNRNPLP14866 589 aaKnown RBP eCLIP18.48■□□□□ 0.55
PTPN7-209ENST00000477554 FNTBP49356 437 aa18.48■□□□□ 0.55
PTPN7-209ENST00000477554 SLC8A3P57103 927 aa18.48■□□□□ 0.55
PTPN7-209ENST00000477554 NR1I3Q14994 352 aa18.48■□□□□ 0.55
PTPN7-209ENST00000477554 TAF5Q15542 800 aa18.48■□□□□ 0.55
PTPN7-209ENST00000477554 ANO4Q32M45 955 aa18.48■□□□□ 0.55
PTPN7-209ENST00000477554 FKBP15Q5T1M5 1219 aa18.48■□□□□ 0.55
PTPN7-209ENST00000477554 KLHDC7AQ5VTJ3 777 aa18.48■□□□□ 0.55
PTPN7-209ENST00000477554 C1orf228Q6PIY5 440 aa18.48■□□□□ 0.55
PTPN7-209ENST00000477554 SCUBE3Q8IX30 993 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms