RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 STAP1Q9ULZ2 295 aa16.92■□□□□ 0.3
VHL-203ENST00000477538 MRPS23Q9Y3D9 190 aaKnown RBP16.92■□□□□ 0.3
VHL-203ENST00000477538 DUSP10Q9Y6W6 482 aa16.92■□□□□ 0.3
VHL-203ENST00000477538 C2orf78A6NCI8 922 aa16.91■□□□□ 0.3
VHL-203ENST00000477538 H3BQ06 376 aaPredicted RBP16.91■□□□□ 0.3
VHL-203ENST00000477538 OAS1P00973 400 aaKnown RBP16.91■□□□□ 0.3
VHL-203ENST00000477538 PDGFRAP16234 1089 aa16.91■□□□□ 0.3
VHL-203ENST00000477538 CEBPBP17676 345 aa16.91■□□□□ 0.3
VHL-203ENST00000477538 KCNA5P22460 613 aa16.91■□□□□ 0.3
VHL-203ENST00000477538 FSHRP23945 695 aa16.91■□□□□ 0.3
VHL-203ENST00000477538 SDC4P31431 198 aa16.91■□□□□ 0.3
VHL-203ENST00000477538 MTHFRP42898 656 aa16.91■□□□□ 0.3
VHL-203ENST00000477538 NOP2P46087 812 aaKnown RBP16.91■□□□□ 0.3
VHL-203ENST00000477538 OGDHQ02218 1023 aa16.91■□□□□ 0.3
VHL-203ENST00000477538 ARHGAP29Q52LW3 1261 aa16.91■□□□□ 0.3
VHL-203ENST00000477538 C10orf120Q5SQS8 335 aa16.91■□□□□ 0.3
VHL-203ENST00000477538 STXBP5Q5T5C0 1151 aa16.91■□□□□ 0.3
VHL-203ENST00000477538 TXNDC8Q6A555 127 aa16.91■□□□□ 0.3
VHL-203ENST00000477538 MSANTD2Q6P1R3 559 aa16.91■□□□□ 0.3
VHL-203ENST00000477538 ZNF662Q6ZS27 426 aa16.91■□□□□ 0.3
VHL-203ENST00000477538 TADA2BQ86TJ2 420 aa16.91■□□□□ 0.3
VHL-203ENST00000477538 ING5Q8WYH8 240 aa16.91■□□□□ 0.3
VHL-203ENST00000477538 CFAP57Q96MR6 1250 aa16.91■□□□□ 0.3
VHL-203ENST00000477538 DDX23Q9BUQ8 820 aaKnown RBP16.91■□□□□ 0.3
VHL-203ENST00000477538 LZTFL1Q9NQ48 299 aa16.91■□□□□ 0.3
VHL-203ENST00000477538 RRN3Q9NYV6 651 aa16.91■□□□□ 0.3
VHL-203ENST00000477538 KIF26AQ9ULI4 1882 aaPredicted RBP16.9■□□□□ 0.3
VHL-203ENST00000477538 MYOFQ9NZM1 2061 aa16.9■□□□□ 0.3
VHL-203ENST00000477538 DOCK4Q8N1I0 1966 aa16.9■□□□□ 0.3
VHL-203ENST00000477538 DPYSL4O14531 572 aa16.9■□□□□ 0.3
VHL-203ENST00000477538 COCHO43405 550 aa16.9■□□□□ 0.3
VHL-203ENST00000477538 PSMA2P25787 234 aa16.9■□□□□ 0.3
VHL-203ENST00000477538 DDX6P26196 483 aaKnown RBP eCLIP16.9■□□□□ 0.3
VHL-203ENST00000477538 ATP5C1P36542 298 aaKnown RBP16.9■□□□□ 0.3
VHL-203ENST00000477538 ARHGAP25P42331 645 aa16.9■□□□□ 0.3
VHL-203ENST00000477538 PTPN9P43378 593 aa16.9■□□□□ 0.3
VHL-203ENST00000477538 SULT1E1P49888 294 aa16.9■□□□□ 0.3
VHL-203ENST00000477538 ZNF143P52747 638 aaPredicted RBP16.9■□□□□ 0.3
VHL-203ENST00000477538 HADHBP55084 474 aaKnown RBP16.9■□□□□ 0.3
VHL-203ENST00000477538 NAP1L1P55209 391 aaKnown RBP16.9■□□□□ 0.3
VHL-203ENST00000477538 PITX1P78337 314 aaPredicted RBP16.9■□□□□ 0.3
VHL-203ENST00000477538 EFEMP1Q12805 493 aa16.9■□□□□ 0.3
VHL-203ENST00000477538 GPR158Q5T848 1215 aa16.9■□□□□ 0.3
VHL-203ENST00000477538 MAB21L3Q8N8X9 362 aa16.9■□□□□ 0.3
VHL-203ENST00000477538 ITFG1Q8TB96 612 aa16.9■□□□□ 0.3
VHL-203ENST00000477538 DQX1Q8TE96 717 aaKnown RBP16.9■□□□□ 0.3
VHL-203ENST00000477538 FNIP1Q8TF40 1166 aa16.9■□□□□ 0.3
VHL-203ENST00000477538 BTBD6Q96KE9 485 aa16.9■□□□□ 0.3
VHL-203ENST00000477538 NPY6RQ99463 290 aa16.9■□□□□ 0.3
VHL-203ENST00000477538 NACA2Q9H009 215 aa16.9■□□□□ 0.3
VHL-203ENST00000477538 SMOC2Q9H3U7 446 aa16.9■□□□□ 0.3
VHL-203ENST00000477538 SLITRK6Q9H5Y7 841 aa16.9■□□□□ 0.3
VHL-203ENST00000477538 TASP1Q9H6P5 420 aa16.9■□□□□ 0.3
VHL-203ENST00000477538 TRMT1Q9NXH9 659 aaKnown RBP16.9■□□□□ 0.3
VHL-203ENST00000477538 IP6K2Q9UHH9 426 aa16.9■□□□□ 0.3
VHL-203ENST00000477538 SALL4Q9UJQ4 1053 aa16.9■□□□□ 0.3
VHL-203ENST00000477538 GUCA1BQ9UMX6 200 aa16.9■□□□□ 0.3
VHL-203ENST00000477538 MYO10Q9HD67 2058 aa16.9■□□□□ 0.3
VHL-203ENST00000477538 TRAV19A0A0A6YYK7 116 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 MACROD2A1Z1Q3 448 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 SOBPA7XYQ1 873 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 MYO1FO00160 1098 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 MDM4O15151 490 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 CCP110O43303 1012 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 BUB1O43683 1085 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 TBX18O95935 607 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 DESP17661 470 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 PFKLP17858 780 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 ATP11AP98196 1134 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 ZNF252P-AS1Q0IIN9 211 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 CDO1Q16878 200 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 C15orf59Q2T9L4 293 aaPredicted RBP16.89■□□□□ 0.29
VHL-203ENST00000477538 SLC25A52Q3SY17 297 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 CCDC14Q49A88 953 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 KLHDC10Q6PID8 442 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 GET4Q7L5D6 327 aaPredicted RBP16.89■□□□□ 0.29
VHL-203ENST00000477538 TAC4Q86UU9 113 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 REXO1L1PQ8IX06 675 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 CCAR2Q8N163 923 aaKnown RBP16.89■□□□□ 0.29
VHL-203ENST00000477538 ARL14EPQ8N8R7 260 aaPredicted RBP16.89■□□□□ 0.29
VHL-203ENST00000477538 MAFAQ8NHW3 353 aaPredicted RBP16.89■□□□□ 0.29
VHL-203ENST00000477538 ADAM32Q8TC27 787 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 HLA-CQ95604 372 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 NT5C3BQ969T7 300 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 CALR3Q96L12 384 aaKnown RBP16.89■□□□□ 0.29
VHL-203ENST00000477538 NECTIN4Q96NY8 510 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 SLC22A12Q96S37 553 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 TBCBQ99426 244 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 CNPY3Q9BT09 278 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 RNF38Q9H0F5 515 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 FAM204AQ9H8W3 233 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 MARCH2Q9P0N8 246 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 SFMBT1Q9UHJ3 866 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 LCMT1Q9UIC8 334 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 ZMYM5Q9UJ78 669 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 RASAL2Q9UJF2 1139 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 DNMT3LQ9UJW3 386 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 ZKSCAN5Q9Y2L8 839 aa16.89■□□□□ 0.29
VHL-203ENST00000477538 USP15Q9Y4E8 981 aaPredicted RBP16.89■□□□□ 0.29
VHL-203ENST00000477538 USP27XA6NNY8 438 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms