RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 IER5LQ5T953 404 aa16.61■□□□□ 0.25
COPS3-207ENST00000477299 FAM102AQ5T9C2 384 aaPredicted RBP16.61■□□□□ 0.25
COPS3-207ENST00000477299 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.61■□□□□ 0.25
COPS3-207ENST00000477299 FMNL3Q8IVF7 1028 aa16.61■□□□□ 0.25
COPS3-207ENST00000477299 SH3RF2Q8TEC5 729 aa16.61■□□□□ 0.25
COPS3-207ENST00000477299 IPO4Q8TEX9 1081 aaKnown RBP16.61■□□□□ 0.25
COPS3-207ENST00000477299 PACSIN1Q9BY11 444 aa16.61■□□□□ 0.25
COPS3-207ENST00000477299 ISCUQ9H1K1 167 aa16.61■□□□□ 0.25
COPS3-207ENST00000477299 LINC00597Q9H2U6 94 aa16.61■□□□□ 0.25
COPS3-207ENST00000477299 ABCC13Q9NSE7 274 aa16.61■□□□□ 0.25
COPS3-207ENST00000477299 CALCOCO1Q9P1Z2 691 aa16.61■□□□□ 0.25
COPS3-207ENST00000477299 RASAL2Q9UJF2 1139 aa16.61■□□□□ 0.25
COPS3-207ENST00000477299 TMEM59LQ9UK28 342 aa16.61■□□□□ 0.25
COPS3-207ENST00000477299 SOBPA7XYQ1 873 aa16.6■□□□□ 0.25
COPS3-207ENST00000477299 GREM1O60565 184 aa16.6■□□□□ 0.25
COPS3-207ENST00000477299 RTN2O75298 545 aa16.6■□□□□ 0.25
COPS3-207ENST00000477299 GZMAP12544 262 aa16.6■□□□□ 0.25
COPS3-207ENST00000477299 WEE1P30291 646 aa16.6■□□□□ 0.25
COPS3-207ENST00000477299 FLT3P36888 993 aa16.6■□□□□ 0.25
COPS3-207ENST00000477299 TUBP50607 506 aa16.6■□□□□ 0.25
COPS3-207ENST00000477299 ZNF268Q14587 947 aaPredicted RBP16.6■□□□□ 0.25
COPS3-207ENST00000477299 ZNF77Q15935 545 aa16.6■□□□□ 0.25
COPS3-207ENST00000477299 TSR1Q2NL82 804 aaKnown RBP16.6■□□□□ 0.25
COPS3-207ENST00000477299 DCAF6Q58WW2 860 aa16.6■□□□□ 0.25
COPS3-207ENST00000477299 EFHC1Q5JVL4 640 aa16.6■□□□□ 0.25
COPS3-207ENST00000477299 CCDC122Q5T0U0 273 aa16.6■□□□□ 0.25
COPS3-207ENST00000477299 OTUD1Q5VV17 481 aaPredicted RBP16.6■□□□□ 0.25
COPS3-207ENST00000477299 RSRC2Q7L4I2 434 aaKnown RBP16.6■□□□□ 0.25
COPS3-207ENST00000477299 SLC26A9Q7LBE3 791 aa16.6■□□□□ 0.25
COPS3-207ENST00000477299 TMEM139Q8IV31 216 aa16.6■□□□□ 0.25
COPS3-207ENST00000477299 ARHGAP18Q8N392 663 aa16.6■□□□□ 0.25
COPS3-207ENST00000477299 ZNF276Q8N554 614 aa16.6■□□□□ 0.25
COPS3-207ENST00000477299 DQX1Q8TE96 717 aaKnown RBP16.6■□□□□ 0.25
COPS3-207ENST00000477299 ELSPBP1Q96BH3 223 aa16.6■□□□□ 0.25
COPS3-207ENST00000477299 ASIC4Q96FT7 647 aa16.6■□□□□ 0.25
COPS3-207ENST00000477299 SLC2A13Q96QE2 648 aa16.6■□□□□ 0.25
COPS3-207ENST00000477299 UHRF1Q96T88 793 aaPredicted RBP16.6■□□□□ 0.25
COPS3-207ENST00000477299 METTL5Q9NRN9 209 aaKnown RBP16.6■□□□□ 0.25
COPS3-207ENST00000477299 ZNHIT6Q9NWK9 470 aaKnown RBP16.6■□□□□ 0.25
COPS3-207ENST00000477299 MARCH2Q9P0N8 246 aa16.6■□□□□ 0.25
COPS3-207ENST00000477299 CFAP97Q9P2B7 532 aa16.6■□□□□ 0.25
COPS3-207ENST00000477299 ARHGAP26Q9UNA1 814 aa16.6■□□□□ 0.25
COPS3-207ENST00000477299 MIA3Q5JRA6 1907 aa16.6■□□□□ 0.25
COPS3-207ENST00000477299 SLC12A8A0AV02 714 aa16.59■□□□□ 0.25
COPS3-207ENST00000477299 SOWAHDA6NJG2 315 aa16.59■□□□□ 0.25
COPS3-207ENST00000477299 ECI2O75521 394 aa16.59■□□□□ 0.25
COPS3-207ENST00000477299 KLKB1P03952 638 aa16.59■□□□□ 0.25
COPS3-207ENST00000477299 ABCB4P21439 1286 aa16.59■□□□□ 0.25
COPS3-207ENST00000477299 RPL7AP62424 266 aaKnown RBP16.59■□□□□ 0.25
COPS3-207ENST00000477299 CDK17Q00537 523 aa16.59■□□□□ 0.25
COPS3-207ENST00000477299 C1QBPQ07021 282 aaKnown RBP16.59■□□□□ 0.25
COPS3-207ENST00000477299 TRIM68Q6AZZ1 485 aa16.59■□□□□ 0.25
COPS3-207ENST00000477299 ALKBH5Q6P6C2 394 aaKnown RBP16.59■□□□□ 0.25
COPS3-207ENST00000477299 MFSD6LQ8IWD5 586 aa16.59■□□□□ 0.25
COPS3-207ENST00000477299 CELF5Q8N6W0 485 aaKnown RBP16.59■□□□□ 0.25
COPS3-207ENST00000477299 RNF139Q8WU17 664 aa16.59■□□□□ 0.25
COPS3-207ENST00000477299 ARHGEF26Q96DR7 871 aa16.59■□□□□ 0.25
COPS3-207ENST00000477299 PANX2Q96RD6 677 aa16.59■□□□□ 0.25
COPS3-207ENST00000477299 TRIM7Q9C029 511 aa16.59■□□□□ 0.25
COPS3-207ENST00000477299 NACA2Q9H009 215 aa16.59■□□□□ 0.25
COPS3-207ENST00000477299 POPDC2Q9HBU9 364 aa16.59■□□□□ 0.25
COPS3-207ENST00000477299 MUTYHQ9UIF7 546 aa16.59■□□□□ 0.25
COPS3-207ENST00000477299 DNMT3LQ9UJW3 386 aa16.59■□□□□ 0.25
COPS3-207ENST00000477299 TFR2Q9UP52 801 aa16.59■□□□□ 0.25
COPS3-207ENST00000477299 NCOR1O75376 2440 aa16.59■□□□□ 0.25
COPS3-207ENST00000477299 COL4A2P08572 1712 aa16.59■□□□□ 0.25
COPS3-207ENST00000477299 SYNJ2BP-COX16A0A087WUM0 186 aa16.58■□□□□ 0.24
COPS3-207ENST00000477299 SSU72P8A0A1W2PR75 194 aa16.58■□□□□ 0.24
COPS3-207ENST00000477299 DPYSL4O14531 572 aa16.58■□□□□ 0.24
COPS3-207ENST00000477299 AKR1B10O60218 316 aa16.58■□□□□ 0.24
COPS3-207ENST00000477299 DAB1O75553 588 aa16.58■□□□□ 0.24
COPS3-207ENST00000477299 CALB1P05937 261 aa16.58■□□□□ 0.24
COPS3-207ENST00000477299 FECHP22830 423 aa16.58■□□□□ 0.24
COPS3-207ENST00000477299 RFC1P35251 1148 aaPredicted RBP16.58■□□□□ 0.24
COPS3-207ENST00000477299 MRE11P49959 708 aa16.58■□□□□ 0.24
COPS3-207ENST00000477299 ATXN1P54253 815 aaKnown RBP16.58■□□□□ 0.24
COPS3-207ENST00000477299 GALCP54803 685 aa16.58■□□□□ 0.24
COPS3-207ENST00000477299 GPC5P78333 572 aa16.58■□□□□ 0.24
COPS3-207ENST00000477299 USP4Q13107 963 aa16.58■□□□□ 0.24
COPS3-207ENST00000477299 SLC18A3Q16572 532 aa16.58■□□□□ 0.24
COPS3-207ENST00000477299 SH3PXD2AQ5TCZ1 1133 aa16.58■□□□□ 0.24
COPS3-207ENST00000477299 MSANTD2Q6P1R3 559 aa16.58■□□□□ 0.24
COPS3-207ENST00000477299 RAD9BQ6WBX8 426 aa16.58■□□□□ 0.24
COPS3-207ENST00000477299 TOGARAM2Q6ZUX3 1019 aa16.58■□□□□ 0.24
COPS3-207ENST00000477299 MTSS1LQ765P7 747 aa16.58■□□□□ 0.24
COPS3-207ENST00000477299 TAC4Q86UU9 113 aa16.58■□□□□ 0.24
COPS3-207ENST00000477299 TTC8Q8TAM2 541 aa16.58■□□□□ 0.24
COPS3-207ENST00000477299 ASNSD1Q9NWL6 643 aa16.58■□□□□ 0.24
COPS3-207ENST00000477299 COX16Q9P0S2 106 aa16.58■□□□□ 0.24
COPS3-207ENST00000477299 IMPACTQ9P2X3 320 aa16.58■□□□□ 0.24
COPS3-207ENST00000477299 MYO1AQ9UBC5 1043 aa16.58■□□□□ 0.24
COPS3-207ENST00000477299 WNT6Q9Y6F9 365 aa16.58■□□□□ 0.24
COPS3-207ENST00000477299 CAPN9O14815 690 aa16.57■□□□□ 0.24
COPS3-207ENST00000477299 SART1O43290 800 aaKnown RBP16.57■□□□□ 0.24
COPS3-207ENST00000477299 HSF2BPO75031 334 aa16.57■□□□□ 0.24
COPS3-207ENST00000477299 STC2O76061 302 aa16.57■□□□□ 0.24
COPS3-207ENST00000477299 TRUB2O95900 331 aaKnown RBP16.57■□□□□ 0.24
COPS3-207ENST00000477299 PFKLP17858 780 aa16.57■□□□□ 0.24
COPS3-207ENST00000477299 PSMC3P17980 439 aa16.57■□□□□ 0.24
COPS3-207ENST00000477299 GDI1P31150 447 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 173.3 ms