RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 A8MXQ7 604 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 GABRDO14764 452 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 CYP26A1O43174 497 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 FAM163BP0C2L3 166 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 ACAT1P24752 427 aaKnown RBP12.2□□□□□ -0.46
LSM2-212ENST00000477182 LMO2P25791 158 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 LHX1P48742 406 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 ZNF132P52740 706 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 RAD23BP54727 409 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 YWHAHQ04917 246 aaPredicted RBP12.2□□□□□ -0.46
LSM2-212ENST00000477182 MAPK8IP2Q13387 824 aaPredicted RBP12.2□□□□□ -0.46
LSM2-212ENST00000477182 PLD1Q13393 1074 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 HNRNPDQ14103 355 aaKnown RBP12.2□□□□□ -0.46
LSM2-212ENST00000477182 ARID5BQ14865 1188 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 ASIC2Q16515 512 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 FBXO43Q4G163 708 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 USP39Q53GS9 565 aaKnown RBP12.2□□□□□ -0.46
LSM2-212ENST00000477182 SFMBT2Q5VUG0 894 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 E4F1Q66K89 784 aaPredicted RBP12.2□□□□□ -0.46
LSM2-212ENST00000477182 SYT13Q7L8C5 426 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 PIP4P1Q86T03 277 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 ACOT1Q86TX2 421 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 CNGA4Q8IV77 575 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 CHCHD4Q8N4Q1 142 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 TTC39CQ8N584 583 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 TC2NQ8N9U0 490 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 SPATA18Q8TC71 538 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 BPIFB1Q8TDL5 484 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 PDLIM2Q96JY6 352 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 DPEP3Q9H4B8 488 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 FAM124BQ9H5Z6 455 aaPredicted RBP12.2□□□□□ -0.46
LSM2-212ENST00000477182 SCUBE2Q9NQ36 999 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 CNTN6Q9UQ52 1028 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 ACACAQ13085 2346 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 CACNA1EQ15878 2313 aa12.2□□□□□ -0.46
LSM2-212ENST00000477182 PATE3B3GLJ2 98 aa12.19□□□□□ -0.46
LSM2-212ENST00000477182 TRDMT1O14717 391 aaKnown RBP12.19□□□□□ -0.46
LSM2-212ENST00000477182 RNF40O75150 1001 aa12.19□□□□□ -0.46
LSM2-212ENST00000477182 FGF19O95750 216 aa12.19□□□□□ -0.46
LSM2-212ENST00000477182 FERP16591 822 aa12.19□□□□□ -0.46
LSM2-212ENST00000477182 DRD1P21728 446 aa12.19□□□□□ -0.46
LSM2-212ENST00000477182 CLCN1P35523 988 aa12.19□□□□□ -0.46
LSM2-212ENST00000477182 PSMC1P62191 440 aaKnown RBP12.19□□□□□ -0.46
LSM2-212ENST00000477182 TNK2Q07912 1038 aa12.19□□□□□ -0.46
LSM2-212ENST00000477182 CCDC173Q0VFZ6 552 aa12.19□□□□□ -0.46
LSM2-212ENST00000477182 TSR1Q2NL82 804 aaKnown RBP12.19□□□□□ -0.46
LSM2-212ENST00000477182 CTXN3Q4LDR2 81 aa12.19□□□□□ -0.46
LSM2-212ENST00000477182 FSTL4Q6MZW2 842 aa12.19□□□□□ -0.46
LSM2-212ENST00000477182 CCDC186Q7Z3E2 898 aa12.19□□□□□ -0.46
LSM2-212ENST00000477182 RAB44Q7Z6P3 723 aaPredicted RBP12.19□□□□□ -0.46
LSM2-212ENST00000477182 UNC93AQ86WB7 457 aa12.19□□□□□ -0.46
LSM2-212ENST00000477182 THEM5Q8N1Q8 247 aa12.19□□□□□ -0.46
LSM2-212ENST00000477182 SLC4A11Q8NBS3 891 aa12.19□□□□□ -0.46
LSM2-212ENST00000477182 OR8K1Q8NGG5 319 aa12.19□□□□□ -0.46
LSM2-212ENST00000477182 HNRNPLLQ8WVV9 542 aaKnown RBP12.19□□□□□ -0.46
LSM2-212ENST00000477182 ACDQ96AP0 544 aa12.19□□□□□ -0.46
LSM2-212ENST00000477182 TMEM176AQ96HP8 235 aa12.19□□□□□ -0.46
LSM2-212ENST00000477182 LRIG1Q96JA1 1093 aa12.19□□□□□ -0.46
LSM2-212ENST00000477182 DNAJC7Q99615 494 aa12.19□□□□□ -0.46
LSM2-212ENST00000477182 LPIN3Q9BQK8 851 aa12.19□□□□□ -0.46
LSM2-212ENST00000477182 SYT15Q9BQS2 421 aa12.19□□□□□ -0.46
LSM2-212ENST00000477182 NT5C1AQ9BXI3 368 aa12.19□□□□□ -0.46
LSM2-212ENST00000477182 NUCKS1Q9H1E3 243 aaKnown RBP12.19□□□□□ -0.46
LSM2-212ENST00000477182 ACP6Q9NPH0 428 aa12.19□□□□□ -0.46
LSM2-212ENST00000477182 ABHD10Q9NUJ1 306 aa12.19□□□□□ -0.46
LSM2-212ENST00000477182 AIPL1Q9NZN9 384 aa12.19□□□□□ -0.46
LSM2-212ENST00000477182 ATP2C2O75185 946 aa12.18□□□□□ -0.46
LSM2-212ENST00000477182 OAZ2O95190 189 aa12.18□□□□□ -0.46
LSM2-212ENST00000477182 PTMAP06454 111 aaKnown RBP12.18□□□□□ -0.46
LSM2-212ENST00000477182 SKILP12757 684 aa12.18□□□□□ -0.46
LSM2-212ENST00000477182 CD19P15391 556 aa12.18□□□□□ -0.46
LSM2-212ENST00000477182 PCSK1P29120 753 aa12.18□□□□□ -0.46
LSM2-212ENST00000477182 WEE1P30291 646 aa12.18□□□□□ -0.46
LSM2-212ENST00000477182 DPP6P42658 865 aa12.18□□□□□ -0.46
LSM2-212ENST00000477182 DGKEP52429 567 aa12.18□□□□□ -0.46
LSM2-212ENST00000477182 EPHB3P54753 998 aa12.18□□□□□ -0.46
LSM2-212ENST00000477182 GSDMDP57764 484 aa12.18□□□□□ -0.46
LSM2-212ENST00000477182 SEMA3BQ13214 749 aa12.18□□□□□ -0.46
LSM2-212ENST00000477182 MRPL58Q14197 206 aaKnown RBP12.18□□□□□ -0.46
LSM2-212ENST00000477182 CCDC142Q17RM4 750 aa12.18□□□□□ -0.46
LSM2-212ENST00000477182 ARHGAP15Q53QZ3 475 aa12.18□□□□□ -0.46
LSM2-212ENST00000477182 TRIM61Q5EBN2 209 aa12.18□□□□□ -0.46
LSM2-212ENST00000477182 ZNF280DQ6N043 979 aa12.18□□□□□ -0.46
LSM2-212ENST00000477182 IRF2BP2Q7Z5L9 587 aa12.18□□□□□ -0.46
LSM2-212ENST00000477182 SLC47A2Q86VL8 602 aa12.18□□□□□ -0.46
LSM2-212ENST00000477182 HDDC3Q8N4P3 179 aa12.18□□□□□ -0.46
LSM2-212ENST00000477182 OR10T2Q8NGX3 314 aa12.18□□□□□ -0.46
LSM2-212ENST00000477182 PIGKQ92643 395 aa12.18□□□□□ -0.46
LSM2-212ENST00000477182 SYN2Q92777 582 aaPredicted RBP12.18□□□□□ -0.46
LSM2-212ENST00000477182 HEXIM2Q96MH2 286 aaKnown RBP12.18□□□□□ -0.46
LSM2-212ENST00000477182 LRRC3BQ96PB8 259 aa12.18□□□□□ -0.46
LSM2-212ENST00000477182 CDH9Q9ULB4 789 aa12.18□□□□□ -0.46
LSM2-212ENST00000477182 PAEPP09466 180 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 CCDC172P0C7W6 258 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 CPB1P15086 417 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 PTPN1P18031 435 aaKnown RBP12.17□□□□□ -0.46
LSM2-212ENST00000477182 BRD2P25440 801 aaKnown RBP12.17□□□□□ -0.46
LSM2-212ENST00000477182 GNA15P30679 374 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 MAPK8P45983 427 aa12.17□□□□□ -0.46
LSM2-212ENST00000477182 DHPSP49366 369 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms