RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 ADAM9Q13443 819 aa12.29□□□□□ -0.44
VARS2-208ENST00000477052 SH3PXD2AQ5TCZ1 1133 aa12.29□□□□□ -0.44
VARS2-208ENST00000477052 KRBA2Q6ZNG9 492 aa12.29□□□□□ -0.44
VARS2-208ENST00000477052 LPCAT2Q7L5N7 544 aa12.29□□□□□ -0.44
VARS2-208ENST00000477052 KIAA1958Q8N8K9 716 aa12.29□□□□□ -0.44
VARS2-208ENST00000477052 OR2I1PQ8NGU4 316 aa12.29□□□□□ -0.44
VARS2-208ENST00000477052 TMEM174Q8WUU8 243 aa12.29□□□□□ -0.44
VARS2-208ENST00000477052 NDRG1Q92597 394 aaKnown RBP12.29□□□□□ -0.44
VARS2-208ENST00000477052 ERCC4Q92889 916 aaPredicted RBP12.29□□□□□ -0.44
VARS2-208ENST00000477052 TATDN2Q93075 761 aa12.29□□□□□ -0.44
VARS2-208ENST00000477052 HEXIM2Q96MH2 286 aaKnown RBP12.29□□□□□ -0.44
VARS2-208ENST00000477052 NIF3L1Q9GZT8 377 aa12.29□□□□□ -0.44
VARS2-208ENST00000477052 CYLDQ9NQC7 956 aa12.29□□□□□ -0.44
VARS2-208ENST00000477052 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.29□□□□□ -0.44
VARS2-208ENST00000477052 CACNA2D2Q9NY47 1150 aa12.29□□□□□ -0.44
VARS2-208ENST00000477052 CALCOCO1Q9P1Z2 691 aa12.29□□□□□ -0.44
VARS2-208ENST00000477052 ZNF202O95125 648 aa12.28□□□□□ -0.44
VARS2-208ENST00000477052 KLKB1P03952 638 aa12.28□□□□□ -0.44
VARS2-208ENST00000477052 NTSR1P30989 418 aa12.28□□□□□ -0.44
VARS2-208ENST00000477052 PSMC2P35998 433 aaKnown RBP12.28□□□□□ -0.44
VARS2-208ENST00000477052 KIF11P52732 1056 aa12.28□□□□□ -0.44
VARS2-208ENST00000477052 PNOCQ13519 176 aa12.28□□□□□ -0.44
VARS2-208ENST00000477052 ZCWPW2Q504Y3 356 aa12.28□□□□□ -0.44
VARS2-208ENST00000477052 TRIM61Q5EBN2 209 aa12.28□□□□□ -0.44
VARS2-208ENST00000477052 INTS8Q75QN2 995 aaKnown RBP12.28□□□□□ -0.44
VARS2-208ENST00000477052 CHPFQ8IZ52 775 aa12.28□□□□□ -0.44
VARS2-208ENST00000477052 SPACA7Q96KW9 195 aa12.28□□□□□ -0.44
VARS2-208ENST00000477052 IMPG2Q9BZV3 1241 aa12.28□□□□□ -0.44
VARS2-208ENST00000477052 CYP3A43Q9HB55 503 aa12.28□□□□□ -0.44
VARS2-208ENST00000477052 TMEM9BQ9NQ34 198 aa12.28□□□□□ -0.44
VARS2-208ENST00000477052 RASAL2Q9UJF2 1139 aa12.28□□□□□ -0.44
VARS2-208ENST00000477052 RALYQ9UKM9 306 aaKnown RBP12.28□□□□□ -0.44
VARS2-208ENST00000477052 CYP8B1Q9UNU6 501 aa12.28□□□□□ -0.44
VARS2-208ENST00000477052 FRYQ5TBA9 3013 aa12.28□□□□□ -0.44
VARS2-208ENST00000477052 USP24Q9UPU5 2620 aa12.27□□□□□ -0.44
VARS2-208ENST00000477052 ADAMTS9Q9P2N4 1935 aa12.27□□□□□ -0.44
VARS2-208ENST00000477052 FAM237AA0A1B0GTK4 181 aa12.27□□□□□ -0.45
VARS2-208ENST00000477052 TULP2O00295 520 aa12.27□□□□□ -0.45
VARS2-208ENST00000477052 CACNG3O60359 315 aa12.27□□□□□ -0.45
VARS2-208ENST00000477052 STC2O76061 302 aa12.27□□□□□ -0.45
VARS2-208ENST00000477052 CFIP05156 583 aa12.27□□□□□ -0.45
VARS2-208ENST00000477052 MYL1P05976 194 aa12.27□□□□□ -0.45
VARS2-208ENST00000477052 CISD3P0C7P0 127 aa12.27□□□□□ -0.45
VARS2-208ENST00000477052 NDUFV2P19404 249 aa12.27□□□□□ -0.45
VARS2-208ENST00000477052 RAD23BP54727 409 aa12.27□□□□□ -0.45
VARS2-208ENST00000477052 RPL6Q02878 288 aaKnown RBP12.27□□□□□ -0.45
VARS2-208ENST00000477052 ZNF252P-AS1Q0IIN9 211 aa12.27□□□□□ -0.45
VARS2-208ENST00000477052 EFEMP1Q12805 493 aa12.27□□□□□ -0.45
VARS2-208ENST00000477052 FOXC1Q12948 553 aa12.27□□□□□ -0.45
VARS2-208ENST00000477052 HSF5Q4G112 596 aaPredicted RBP12.27□□□□□ -0.45
VARS2-208ENST00000477052 DAB2IPQ5VWQ8 1189 aa12.27□□□□□ -0.45
VARS2-208ENST00000477052 LYSMD4Q5XG99 296 aa12.27□□□□□ -0.45
VARS2-208ENST00000477052 Q6ZNB5 142 aa12.27□□□□□ -0.45
VARS2-208ENST00000477052 C11orf74Q86VG3 221 aa12.27□□□□□ -0.45
VARS2-208ENST00000477052 GUF1Q8N442 669 aaKnown RBP12.27□□□□□ -0.45
VARS2-208ENST00000477052 SLC4A11Q8NBS3 891 aa12.27□□□□□ -0.45
VARS2-208ENST00000477052 DEFB124Q8NES8 71 aa12.27□□□□□ -0.45
VARS2-208ENST00000477052 CCDC47Q96A33 483 aaKnown RBP12.27□□□□□ -0.45
VARS2-208ENST00000477052 DUSP16Q9BY84 665 aa12.27□□□□□ -0.45
VARS2-208ENST00000477052 TMEM8AQ9HCN3 771 aa12.27□□□□□ -0.45
VARS2-208ENST00000477052 CD248Q9HCU0 757 aa12.27□□□□□ -0.45
VARS2-208ENST00000477052 CISHQ9NSE2 258 aa12.27□□□□□ -0.45
VARS2-208ENST00000477052 DNMT3LQ9UJW3 386 aa12.27□□□□□ -0.45
VARS2-208ENST00000477052 LSM7Q9UK45 103 aaKnown RBP12.27□□□□□ -0.45
VARS2-208ENST00000477052 TNRC6BQ9UPQ9 1833 aaKnown RBP12.27□□□□□ -0.45
VARS2-208ENST00000477052 IGHV1OR15-9A0A0B4J2B8 117 aa12.26□□□□□ -0.45
VARS2-208ENST00000477052 MAPK13O15264 365 aa12.26□□□□□ -0.45
VARS2-208ENST00000477052 ENGP17813 658 aa12.26□□□□□ -0.45
VARS2-208ENST00000477052 PLA2G4AP47712 749 aa12.26□□□□□ -0.45
VARS2-208ENST00000477052 DGKGP49619 791 aa12.26□□□□□ -0.45
VARS2-208ENST00000477052 PMS1P54277 932 aaKnown RBP12.26□□□□□ -0.45
VARS2-208ENST00000477052 LRMPQ12912 555 aa12.26□□□□□ -0.45
VARS2-208ENST00000477052 NFIL3Q16649 462 aa12.26□□□□□ -0.45
VARS2-208ENST00000477052 CBWD6Q4V339 395 aa12.26□□□□□ -0.45
VARS2-208ENST00000477052 CBWD3Q5JTY5 395 aa12.26□□□□□ -0.45
VARS2-208ENST00000477052 CBWD5Q5RIA9 395 aa12.26□□□□□ -0.45
VARS2-208ENST00000477052 KRT39Q6A163 491 aa12.26□□□□□ -0.45
VARS2-208ENST00000477052 SYT12Q8IV01 421 aa12.26□□□□□ -0.45
VARS2-208ENST00000477052 SLC41A1Q8IVJ1 513 aa12.26□□□□□ -0.45
VARS2-208ENST00000477052 IPO4Q8TEX9 1081 aaKnown RBP12.26□□□□□ -0.45
VARS2-208ENST00000477052 XPO6Q96QU8 1125 aaKnown RBP12.26□□□□□ -0.45
VARS2-208ENST00000477052 GTPBP2Q9BX10 602 aaKnown RBP12.26□□□□□ -0.45
VARS2-208ENST00000477052 WDR35Q9P2L0 1181 aa12.26□□□□□ -0.45
VARS2-208ENST00000477052 CLEC4EQ9ULY5 219 aa12.26□□□□□ -0.45
VARS2-208ENST00000477052 PCDHA5Q9Y5H7 936 aa12.26□□□□□ -0.45
VARS2-208ENST00000477052 CEP295Q9C0D2 2601 aa12.26□□□□□ -0.45
VARS2-208ENST00000477052 ASCC3Q8N3C0 2202 aaKnown RBP12.25□□□□□ -0.45
VARS2-208ENST00000477052 C1QTNF9BB2RNN3 333 aa12.25□□□□□ -0.45
VARS2-208ENST00000477052 CALCAP01258 141 aa12.25□□□□□ -0.45
VARS2-208ENST00000477052 C1QTNF9P0C862 333 aa12.25□□□□□ -0.45
VARS2-208ENST00000477052 RPL13P26373 211 aaKnown RBP12.25□□□□□ -0.45
VARS2-208ENST00000477052 MAOBP27338 520 aa12.25□□□□□ -0.45
VARS2-208ENST00000477052 CORO1AP31146 461 aaKnown RBP12.25□□□□□ -0.45
VARS2-208ENST00000477052 PRCPP42785 496 aa12.25□□□□□ -0.45
VARS2-208ENST00000477052 MXI1P50539 228 aa12.25□□□□□ -0.45
VARS2-208ENST00000477052 GOLGA8FQ08AF8 430 aa12.25□□□□□ -0.45
VARS2-208ENST00000477052 GOLGA8DPQ0D2H9 430 aa12.25□□□□□ -0.45
VARS2-208ENST00000477052 GEN1Q17RS7 908 aa12.25□□□□□ -0.45
VARS2-208ENST00000477052 GOLGA7BQ2TAP0 167 aa12.25□□□□□ -0.45
VARS2-208ENST00000477052 DCAF17Q5H9S7 520 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms