RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 STC2O76061 302 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 RHOBTB1O94844 696 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 KLF8O95600 359 aaPredicted RBP11.34□□□□□ -0.59
SEC13-214ENST00000476597 KLKB1P03952 638 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 ZNF806P0C7X5 589 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 VDRP11473 427 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 TBXAS1P24557 533 aaPredicted RBP11.34□□□□□ -0.59
SEC13-214ENST00000476597 TKTL1P51854 596 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 COG7P83436 770 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 PDE4CQ08493 712 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 EFEMP1Q12805 493 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 GOLGA7BQ2TAP0 167 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 CCDC40Q4G0X9 1142 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 USP39Q53GS9 565 aaKnown RBP11.34□□□□□ -0.59
SEC13-214ENST00000476597 EOGTQ5NDL2 527 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 PLA2G2CQ5R387 149 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 ANO7Q6IWH7 933 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 KLHL10Q6JEL2 608 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 NUDT18Q6ZVK8 323 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 ARHGAP18Q8N392 663 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 TERB1Q8NA31 727 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 EHBP1Q8NDI1 1231 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 OLIG1Q8TAK6 271 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 LMO3Q8TAP4 145 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 NETO1Q8TDF5 533 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 CNOT6LQ96LI5 555 aaKnown RBP11.34□□□□□ -0.59
SEC13-214ENST00000476597 XPO6Q96QU8 1125 aaKnown RBP11.34□□□□□ -0.59
SEC13-214ENST00000476597 FBXO10Q9UK96 956 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 TSPAN16Q9UKR8 245 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 HCN2Q9UL51 889 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 ZNF510Q9Y2H8 683 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 LAMA1P25391 3075 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.33□□□□□ -0.6
SEC13-214ENST00000476597 MED19A0JLT2 244 aaPredicted RBP11.33□□□□□ -0.6
SEC13-214ENST00000476597 BICDL2A1A5D9 508 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 NEDD8-MDP1E9PL57 170 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 RNF225M0QZC1 329 aaPredicted RBP11.33□□□□□ -0.6
SEC13-214ENST00000476597 O00370 1275 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 BIN1O00499 593 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 SLC30A4O14863 429 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 CACNG3O60359 315 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 GDF9O60383 454 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 ALDH1A2O94788 518 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 GNA14O95837 355 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 ZBED1O96006 694 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 CISD3P0C7P0 127 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 TYRP14679 529 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 CD19P15391 556 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 BCAT1P54687 386 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 MARSP56192 900 aaKnown RBP11.33□□□□□ -0.6
SEC13-214ENST00000476597 STX17P56962 302 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 YWHAGP61981 247 aaKnown RBP eCLIP11.33□□□□□ -0.6
SEC13-214ENST00000476597 BST2Q10589 180 aaKnown RBP11.33□□□□□ -0.6
SEC13-214ENST00000476597 CETN1Q12798 172 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 PKDCCQ504Y2 493 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 GRAMD4Q6IC98 578 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 LCLAT1Q6UWP7 414 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 TPGS1Q6ZTW0 290 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 BHLHA9Q7RTU4 235 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 C11orf74Q86VG3 221 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 MIB1Q86YT6 1006 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 TRIM59Q8IWR1 403 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 MDGA1Q8NFP4 955 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 UBA3Q8TBC4 463 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 KCTD13Q8WZ19 329 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 NDRG1Q92597 394 aaKnown RBP11.33□□□□□ -0.6
SEC13-214ENST00000476597 P2RY11Q96G91 374 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 NT5C1BQ96P26 610 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 BBS2Q9BXC9 721 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 SRRTQ9BXP5 876 aaKnown RBP11.33□□□□□ -0.6
SEC13-214ENST00000476597 TPSD1Q9BZJ3 242 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 ULBP1Q9BZM6 244 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 DCLK3Q9C098 648 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 POLMQ9NP87 494 aaPredicted RBP11.33□□□□□ -0.6
SEC13-214ENST00000476597 ZDHHC4Q9NPG8 344 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 HESX1Q9UBX0 185 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 CDV3Q9UKY7 258 aaKnown RBP11.33□□□□□ -0.6
SEC13-214ENST00000476597 INVSQ9Y283 1065 aa11.33□□□□□ -0.6
SEC13-214ENST00000476597 PRRT4C9JH25 899 aa11.32□□□□□ -0.6
SEC13-214ENST00000476597 PAEPP09466 180 aa11.32□□□□□ -0.6
SEC13-214ENST00000476597 CHKAP35790 457 aa11.32□□□□□ -0.6
SEC13-214ENST00000476597 KCNH2Q12809 1159 aa11.32□□□□□ -0.6
SEC13-214ENST00000476597 ELF2Q15723 593 aa11.32□□□□□ -0.6
SEC13-214ENST00000476597 CCDC6Q16204 474 aa11.32□□□□□ -0.6
SEC13-214ENST00000476597 CNGA2Q16280 664 aa11.32□□□□□ -0.6
SEC13-214ENST00000476597 C10orf76Q5T2E6 689 aa11.32□□□□□ -0.6
SEC13-214ENST00000476597 TMEM270Q6UE05 265 aa11.32□□□□□ -0.6
SEC13-214ENST00000476597 TRMT11Q7Z4G4 463 aaKnown RBP11.32□□□□□ -0.6
SEC13-214ENST00000476597 SCML4Q8N228 414 aa11.32□□□□□ -0.6
SEC13-214ENST00000476597 ZNF513Q8N8E2 541 aaPredicted RBP11.32□□□□□ -0.6
SEC13-214ENST00000476597 TFAP2BQ92481 460 aa11.32□□□□□ -0.6
SEC13-214ENST00000476597 KAT5Q92993 513 aa11.32□□□□□ -0.6
SEC13-214ENST00000476597 ZSWIM1Q9BR11 485 aa11.32□□□□□ -0.6
SEC13-214ENST00000476597 LRRC4Q9HBW1 653 aa11.32□□□□□ -0.6
SEC13-214ENST00000476597 VPS45Q9NRW7 570 aa11.32□□□□□ -0.6
SEC13-214ENST00000476597 DNAJC17Q9NVM6 304 aaKnown RBP11.32□□□□□ -0.6
SEC13-214ENST00000476597 KIAA1468Q9P260 1216 aa11.32□□□□□ -0.6
SEC13-214ENST00000476597 RASAL2Q9UJF2 1139 aa11.32□□□□□ -0.6
SEC13-214ENST00000476597 AGO1Q9UL18 857 aaKnown RBP11.32□□□□□ -0.6
SEC13-214ENST00000476597 CTNND2Q9UQB3 1225 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms