RNA–Protein interactions for RNA: ENST00000476581.6

XPC-205, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 1 (best)

Gene XPC, Length 2,944 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-205ENST00000476581 LRRTM3Q86VH5 581 aa12.58□□□□□ -0.4
XPC-205ENST00000476581 STKLD1Q8NE28 680 aa12.58□□□□□ -0.4
XPC-205ENST00000476581 ZNF564Q8TBZ8 553 aaPredicted RBP12.58□□□□□ -0.4
XPC-205ENST00000476581 CLEC4CQ8WTT0 213 aa12.58□□□□□ -0.4
XPC-205ENST00000476581 RSPH1Q8WYR4 309 aa12.58□□□□□ -0.4
XPC-205ENST00000476581 GPR62Q9BZJ7 368 aa12.58□□□□□ -0.4
XPC-205ENST00000476581 ZCWPW1Q9H0M4 648 aa12.58□□□□□ -0.4
XPC-205ENST00000476581 VCXQ9H320 206 aa12.58□□□□□ -0.4
XPC-205ENST00000476581 NKX1-2Q9UD57 310 aaPredicted RBP12.58□□□□□ -0.4
XPC-205ENST00000476581 INTUQ9ULD6 942 aa12.58□□□□□ -0.4
XPC-205ENST00000476581 TCRBV5S1A1TA0A578 114 aa12.57□□□□□ -0.4
XPC-205ENST00000476581 ZSCAN9O15535 394 aaPredicted RBP12.57□□□□□ -0.4
XPC-205ENST00000476581 FAM163BP0C2L3 166 aa12.57□□□□□ -0.4
XPC-205ENST00000476581 VDRP11473 427 aa12.57□□□□□ -0.4
XPC-205ENST00000476581 SKIP12755 728 aa12.57□□□□□ -0.4
XPC-205ENST00000476581 SLC11A1P49279 550 aa12.57□□□□□ -0.4
XPC-205ENST00000476581 PEX5P50542 639 aa12.57□□□□□ -0.4
XPC-205ENST00000476581 ZNF252P-AS1Q0IIN9 211 aa12.57□□□□□ -0.4
XPC-205ENST00000476581 MESDQ14696 234 aa12.57□□□□□ -0.4
XPC-205ENST00000476581 MDH1BQ5I0G3 518 aa12.57□□□□□ -0.4
XPC-205ENST00000476581 B3GALNT2Q8NCR0 500 aa12.57□□□□□ -0.4
XPC-205ENST00000476581 SNX25Q9H3E2 840 aa12.57□□□□□ -0.4
XPC-205ENST00000476581 RXFP1Q9HBX9 757 aa12.57□□□□□ -0.4
XPC-205ENST00000476581 MARCH5Q9NX47 278 aa12.57□□□□□ -0.4
XPC-205ENST00000476581 GGT7Q9UJ14 662 aa12.57□□□□□ -0.4
XPC-205ENST00000476581 GTF3C4Q9UKN8 822 aa12.57□□□□□ -0.4
XPC-205ENST00000476581 NLRC5Q86WI3 1866 aa12.57□□□□□ -0.4
XPC-205ENST00000476581 PGRMC1O00264 195 aaKnown RBP12.57□□□□□ -0.4
XPC-205ENST00000476581 NRP1O14786 923 aa12.57□□□□□ -0.4
XPC-205ENST00000476581 PDHA1P08559 390 aa12.57□□□□□ -0.4
XPC-205ENST00000476581 WARSP23381 471 aaKnown RBP12.57□□□□□ -0.4
XPC-205ENST00000476581 CDH5P33151 784 aaPredicted RBP12.57□□□□□ -0.4
XPC-205ENST00000476581 LLGL1Q15334 1064 aa12.57□□□□□ -0.4
XPC-205ENST00000476581 CNGA2Q16280 664 aa12.57□□□□□ -0.4
XPC-205ENST00000476581 OR52E8Q6IFG1 317 aa12.57□□□□□ -0.4
XPC-205ENST00000476581 PHF13Q86YI8 300 aaPredicted RBP12.57□□□□□ -0.4
XPC-205ENST00000476581 TOP6BLQ8N6T0 577 aa12.57□□□□□ -0.4
XPC-205ENST00000476581 KRT35Q92764 455 aa12.57□□□□□ -0.4
XPC-205ENST00000476581 PLEKHG4BQ96PX9 1271 aa12.57□□□□□ -0.4
XPC-205ENST00000476581 DDX47Q9H0S4 455 aaKnown RBP12.57□□□□□ -0.4
XPC-205ENST00000476581 UBN1Q9NPG3 1134 aa12.57□□□□□ -0.4
XPC-205ENST00000476581 E5RJQ4 531 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 GOLGA8SH3BPF8 625 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 GRAP2O75791 330 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 AGTP01019 485 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 RAG1P15918 1043 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 RPL9P32969 192 aaKnown RBP12.56□□□□□ -0.4
XPC-205ENST00000476581 YWHAEP62258 255 aaKnown RBP12.56□□□□□ -0.4
XPC-205ENST00000476581 USP4Q13107 963 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 DCAF12L1Q5VU92 463 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 TRNP1Q6NT89 227 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 LCLAT1Q6UWP7 414 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 NT5DC3Q86UY8 548 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 JOSD2Q8TAC2 188 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 STK32AQ8WU08 396 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 KCNK16Q96T55 309 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.56□□□□□ -0.42e-6■■■□□ 17.2
XPC-205ENST00000476581 EPB41L4BQ9H329 900 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 CXXC1Q9P0U4 656 aaPredicted RBP12.56□□□□□ -0.4
XPC-205ENST00000476581 LRFN2Q9ULH4 789 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 ZMYND8Q9ULU4 1186 aaPredicted RBP12.56□□□□□ -0.4
XPC-205ENST00000476581 ATP8A1Q9Y2Q0 1164 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 A0A0A6YYK5 440 aaPredicted RBP12.56□□□□□ -0.4
XPC-205ENST00000476581 CEP104O60308 925 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 PARP6Q2NL67 630 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 C1QTNF12Q5T7M4 302 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 RNF220Q5VTB9 566 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 SLFN11Q7Z7L1 901 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 CROCCP2Q86T23 111 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 CRYBG2Q8N1P7 616 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 EMC1Q8N766 993 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 APBB2Q92870 758 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 BADQ92934 168 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 TSPAN18Q96SJ8 248 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 AP1M1Q9BXS5 423 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 AMACRQ9UHK6 382 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 ANAPC7Q9UJX3 599 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 ARL2BPQ9Y2Y0 163 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 ALG6Q9Y672 507 aa12.56□□□□□ -0.4
XPC-205ENST00000476581 KIAA0355O15063 1070 aa12.55□□□□□ -0.4
XPC-205ENST00000476581 PEX11AO75192 247 aa12.55□□□□□ -0.4
XPC-205ENST00000476581 GSTA2P09210 222 aa12.55□□□□□ -0.4
XPC-205ENST00000476581 TPBGLP0DKB5 382 aa12.55□□□□□ -0.4
XPC-205ENST00000476581 PTPN1P18031 435 aaKnown RBP12.55□□□□□ -0.4
XPC-205ENST00000476581 POLE2P56282 527 aa12.55□□□□□ -0.4
XPC-205ENST00000476581 MTA1Q13330 715 aa12.55□□□□□ -0.4
XPC-205ENST00000476581 TSNAXIP1Q2TAA8 658 aa12.55□□□□□ -0.4
XPC-205ENST00000476581 IRGCQ6NXR0 463 aa12.55□□□□□ -0.4
XPC-205ENST00000476581 RSPO2Q6UXX9 243 aaPredicted RBP12.55□□□□□ -0.4
XPC-205ENST00000476581 SCUBE3Q8IX30 993 aa12.55□□□□□ -0.4
XPC-205ENST00000476581 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.55□□□□□ -0.4
XPC-205ENST00000476581 ABI1Q8IZP0 508 aa12.55□□□□□ -0.4
XPC-205ENST00000476581 FITM2Q8N6M3 262 aa12.55□□□□□ -0.4
XPC-205ENST00000476581 ENDOVQ8N8Q3 282 aaKnown RBP12.55□□□□□ -0.4
XPC-205ENST00000476581 MAIP1Q8WWC4 291 aa12.55□□□□□ -0.4
XPC-205ENST00000476581 PCED1BQ96HM7 432 aa12.55□□□□□ -0.4
XPC-205ENST00000476581 MCEEQ96PE7 176 aa12.55□□□□□ -0.4
XPC-205ENST00000476581 FMO2Q99518 471 aa12.55□□□□□ -0.4
XPC-205ENST00000476581 VN1R3Q9BXE9 311 aa12.55□□□□□ -0.4
XPC-205ENST00000476581 ZNF518BQ9C0D4 1074 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms