RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 C17orf53Q8N3J3 647 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-207ENST00000476169 SRBD1Q8N5C6 995 aaKnown RBP4.61□□□□□ -1.67
VPS13D-207ENST00000476169 ZNF713Q8N859 430 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-207ENST00000476169 ARL10Q8N8L6 244 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 OR56A1Q8NGH5 318 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 BPIFB1Q8TDL5 484 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 HMGB4Q8WW32 186 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 TBC1D5Q92609 795 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 NSUN4Q96CB9 384 aaKnown RBP4.61□□□□□ -1.67
VPS13D-207ENST00000476169 APOPT1Q96IL0 206 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 NEU1Q99519 415 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 ADPGKQ9BRR6 497 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 VPS16Q9H269 839 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 FAM83DQ9H4H8 585 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 UNKLQ9H9P5 680 aaKnown RBP4.61□□□□□ -1.67
VPS13D-207ENST00000476169 VEZTQ9HBM0 779 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 G6PC2Q9NQR9 355 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 SEPT11Q9NVA2 429 aaKnown RBP4.61□□□□□ -1.67
VPS13D-207ENST00000476169 HSFX1Q9UBD0 423 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 DKK4Q9UBT3 224 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 ZFR2Q9UPR6 939 aaKnown RBP4.61□□□□□ -1.67
VPS13D-207ENST00000476169 HPSEQ9Y251 543 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 ZNF711Q9Y462 761 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 CDY1Q9Y6F8 540 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 LMTK3Q96Q04 1460 aa4.61□□□□□ -1.67
VPS13D-207ENST00000476169 PTGES3LE9PB15 166 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 MASP2O00187 686 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 LEFTY2O00292 366 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 PEX12O00623 359 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 TSPAN4O14817 238 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 ZSCAN9O15535 394 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-207ENST00000476169 ERN1O75460 977 aaKnown RBP4.6□□□□□ -1.67
VPS13D-207ENST00000476169 NTSR2O95665 410 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 TGFB3P10600 412 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 ITGALP20701 1170 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 LRPAP1P30533 357 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 MAPK4P31152 587 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 APOBEC3AP31941 199 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-207ENST00000476169 TNNT3P45378 269 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-207ENST00000476169 PXNP49023 591 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-207ENST00000476169 NLRP5P59047 1200 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 KRT83P78385 493 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 CREB5Q02930 508 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 GRM4Q14833 912 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 ZNF124Q15973 351 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 BAK1Q16611 211 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 TMEM266Q2M3C6 531 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 P3H1Q32P28 736 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 ZIK1Q3SY52 487 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-207ENST00000476169 TTC22Q5TAA0 569 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 C1QL3Q5VWW1 255 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 METRNLQ641Q3 311 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 FOXR2Q6PJQ5 311 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 PXKQ7Z7A4 578 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 SGMS1Q86VZ5 419 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 IQCA1Q86XH1 822 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 ANKRD44Q8N8A2 993 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 USP38Q8NB14 1042 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 POC1BQ8TC44 478 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 SSH3Q8TE77 659 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 AFAP1L1Q8TED9 768 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 CREB3L4Q8TEY5 395 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 RSC1A1Q92681 617 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 KIF1BPQ96EK5 621 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 RBM17Q96I25 401 aaKnown RBP4.6□□□□□ -1.67
VPS13D-207ENST00000476169 LRIG1Q96JA1 1093 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 MED15Q96RN5 788 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 ZSWIM1Q9BR11 485 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 SLC46A2Q9BY10 475 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 SLC25A18Q9H1K4 315 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 SMOC2Q9H3U7 446 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 PRDM13Q9H4Q3 707 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 VSX1Q9NZR4 365 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-207ENST00000476169 PPP4R1LQ9P1A2 415 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 CHORDC1Q9UHD1 332 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-207ENST00000476169 USP15Q9Y4E8 981 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-207ENST00000476169 DUSP10Q9Y6W6 482 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 AATKQ6ZMQ8 1374 aa4.6□□□□□ -1.67
VPS13D-207ENST00000476169 A0A1B0GTW7 788 aa4.59□□□□□ -1.67
VPS13D-207ENST00000476169 TRIM64A6NGJ6 449 aa4.59□□□□□ -1.67
VPS13D-207ENST00000476169 TRIM64BA6NI03 449 aa4.59□□□□□ -1.67
VPS13D-207ENST00000476169 GOLGA6L6A8MZA4 724 aa4.59□□□□□ -1.67
VPS13D-207ENST00000476169 FOXS1O43638 330 aa4.59□□□□□ -1.67
VPS13D-207ENST00000476169 DHX16O60231 1041 aaKnown RBP4.59□□□□□ -1.67
VPS13D-207ENST00000476169 SRGAP2O75044 1071 aa4.59□□□□□ -1.67
VPS13D-207ENST00000476169 TBCAO75347 108 aaKnown RBP4.59□□□□□ -1.67
VPS13D-207ENST00000476169 GJB3O75712 270 aa4.59□□□□□ -1.67
VPS13D-207ENST00000476169 MLYCDO95822 493 aa4.59□□□□□ -1.67
VPS13D-207ENST00000476169 GPANK1O95872 356 aa4.59□□□□□ -1.67
VPS13D-207ENST00000476169 TFRCP02786 760 aaKnown RBP4.59□□□□□ -1.67
VPS13D-207ENST00000476169 CSH1P0DML2 217 aa4.59□□□□□ -1.67
VPS13D-207ENST00000476169 CSH2P0DML3 217 aa4.59□□□□□ -1.67
VPS13D-207ENST00000476169 KCNA2P16389 499 aa4.59□□□□□ -1.67
VPS13D-207ENST00000476169 MUTP22033 750 aa4.59□□□□□ -1.67
VPS13D-207ENST00000476169 FGFR4P22455 802 aa4.59□□□□□ -1.67
VPS13D-207ENST00000476169 NNMTP40261 264 aa4.59□□□□□ -1.67
VPS13D-207ENST00000476169 MCM2P49736 904 aa4.59□□□□□ -1.67
VPS13D-207ENST00000476169 DGKEP52429 567 aa4.59□□□□□ -1.67
VPS13D-207ENST00000476169 RABGGTBP53611 331 aa4.59□□□□□ -1.67
VPS13D-207ENST00000476169 PRKAG1P54619 331 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms