RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.93□□□□□ -0.66
ABCF1-205ENST00000475993 CPT1BQ92523 772 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 TMIGD2Q96BF3 282 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 SIAEQ9HAT2 523 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 IGSF9Q9P2J2 1179 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 PPP1R1BQ9UD71 204 aaPredicted RBP10.93□□□□□ -0.66
ABCF1-205ENST00000475993 SQORQ9Y6N5 450 aa10.93□□□□□ -0.66
ABCF1-205ENST00000475993 FAM86B1E9PN63 330 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 FAM189A1O60320 539 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 CNOT3O75175 753 aaKnown RBP10.92□□□□□ -0.66
ABCF1-205ENST00000475993 CAPNS1P04632 268 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 ENO2P09104 434 aaPredicted RBP10.92□□□□□ -0.66
ABCF1-205ENST00000475993 FAM86B2P0C5J1 330 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 MSL3P1P0C860 447 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 ZNF12P17014 697 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 CDH3P22223 829 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 ACAT1P24752 427 aaKnown RBP10.92□□□□□ -0.66
ABCF1-205ENST00000475993 PRDX6P30041 224 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 PPARGP37231 505 aaPredicted RBP10.92□□□□□ -0.66
ABCF1-205ENST00000475993 CDKL1Q00532 357 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 ALCAMQ13740 583 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 ADGRE1Q14246 886 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 PSMD6Q15008 389 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 SF3B4Q15427 424 aaKnown RBP eCLIP10.92□□□□□ -0.663e-7■■□□□ 14
ABCF1-205ENST00000475993 SLC27A3Q5K4L6 730 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 ODR4Q5SWX8 454 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 C6orf52Q5T4I8 152 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 DCDC5Q6ZRR9 648 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 RCOR2Q8IZ40 523 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 DEFB107AQ8IZN7 70 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 TSPAN14Q8NG11 270 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 TRPC4APQ8TEL6 797 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 JDP2Q8WYK2 163 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 SEMA4DQ92854 862 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 CELF1Q92879 486 aaKnown RBP10.92□□□□□ -0.66
ABCF1-205ENST00000475993 SLITRK1Q96PX8 696 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 P2RX7Q99572 595 aaKnown RBP10.92□□□□□ -0.66
ABCF1-205ENST00000475993 HSD17B14Q9BPX1 270 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 TMEM121Q9BTD3 319 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 INO80BQ9C086 356 aaPredicted RBP10.92□□□□□ -0.66
ABCF1-205ENST00000475993 SLC38A7Q9NVC3 462 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 ZMAT5Q9UDW3 170 aaKnown RBP10.92□□□□□ -0.66
ABCF1-205ENST00000475993 RIMS3Q9UJD0 308 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 A0A1B0GTW7 788 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 SOBPA7XYQ1 873 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 DDHD2O94830 711 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 GSSP48637 474 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 GPC3P51654 580 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 GSTO1P78417 241 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 MRPS5P82675 430 aaKnown RBP10.92□□□□□ -0.66
ABCF1-205ENST00000475993 AP3B2Q13367 1082 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 CSRNP1Q96S65 589 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 PCIF1Q9H4Z3 704 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 STN1Q9H668 368 aaKnown RBP10.92□□□□□ -0.66
ABCF1-205ENST00000475993 CYP4F11Q9HBI6 524 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 CNGB3Q9NQW8 809 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 TBC1D23Q9NUY8 699 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 HOXC10Q9NYD6 342 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 IKBKGQ9Y6K9 419 aa10.92□□□□□ -0.66
ABCF1-205ENST00000475993 CCDC195A0A1B0GUA6 201 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 MEIS2O14770 477 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 MSH4O15457 936 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 CSPG5O95196 566 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 INHBAP08476 426 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 HSPA1AP0DMV8 641 aaKnown RBP10.91□□□□□ -0.66
ABCF1-205ENST00000475993 HSPA1BP0DMV9 641 aaKnown RBP10.91□□□□□ -0.66
ABCF1-205ENST00000475993 CIITAP33076 1130 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 GJC1P36383 396 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 HSD17B4P51659 736 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 RWDD4Q6NW29 188 aaKnown RBP10.91□□□□□ -0.66
ABCF1-205ENST00000475993 DCLRE1AQ6PJP8 1040 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 TXNRD3Q86VQ6 643 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 NUDCD3Q8IVD9 361 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 CACTIN-AS1Q8N1I8 211 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 CPA5Q8WXQ8 436 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 GID8Q9NWU2 228 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 RBBP6Q7Z6E9 1792 aaKnown RBP10.91□□□□□ -0.66
ABCF1-205ENST00000475993 TCRBV9S1A1TA0A576 114 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 PI4K2BG5E9Z4 385 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 SGK1O00141 431 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 CYB561D2O14569 222 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 ZBTB39O15060 712 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 SIN3BO75182 1162 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 IFNB1P01574 187 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 MCCD1P59942 119 aaPredicted RBP10.91□□□□□ -0.66
ABCF1-205ENST00000475993 RALGDSQ12967 914 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 ATP1A4Q13733 1029 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 KCNJ8Q15842 424 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 ATP13A4Q4VNC1 1196 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 SPOPLQ6IQ16 392 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 POTEAQ6S8J7 498 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 MFSD7Q6UXD7 560 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 MON1BQ7L1V2 547 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 C12orf56Q8IXR9 622 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 LRGUKQ96M69 825 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 RTFDC1Q9BY42 306 aaPredicted RBP10.91□□□□□ -0.66
ABCF1-205ENST00000475993 TUFT1Q9NNX1 390 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 KLHL11Q9NVR0 708 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.91□□□□□ -0.66
ABCF1-205ENST00000475993 HERC5Q9UII4 1024 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms