RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	TMF1	P82094	1093 aa		5.76	□□□□□ -1.49
PRKD3-208	ENST00000475912	SATB1	Q01826	763 aa		5.76	□□□□□ -1.49
PRKD3-208	ENST00000475912	TFF2	Q03403	129 aa		5.76	□□□□□ -1.49
PRKD3-208	ENST00000475912	KRT17	Q04695	432 aa		5.76	□□□□□ -1.49
PRKD3-208	ENST00000475912	ZIK1	Q3SY52	487 aa	Predicted RBP	5.76	□□□□□ -1.49
PRKD3-208	ENST00000475912	DEPDC1	Q5TB30	811 aa		5.76	□□□□□ -1.49
PRKD3-208	ENST00000475912	CXorf57	Q6NSI4	855 aa	Known RBP	5.76	□□□□□ -1.49
PRKD3-208	ENST00000475912	SWSAP1	Q6NVH7	229 aa		5.76	□□□□□ -1.49
PRKD3-208	ENST00000475912	SLC29A4	Q7RTT9	530 aa		5.76	□□□□□ -1.49
PRKD3-208	ENST00000475912	CHPF	Q8IZ52	775 aa		5.76	□□□□□ -1.49
PRKD3-208	ENST00000475912	LRRC71	Q8N4P6	559 aa		5.76	□□□□□ -1.49
PRKD3-208	ENST00000475912	FANCB	Q8NB91	859 aa		5.76	□□□□□ -1.49
PRKD3-208	ENST00000475912	OR6B3	Q8NGW1	331 aa		5.76	□□□□□ -1.49
PRKD3-208	ENST00000475912	TBC1D5	Q92609	795 aa		5.76	□□□□□ -1.49
PRKD3-208	ENST00000475912	REPS1	Q96D71	796 aa		5.76	□□□□□ -1.49
PRKD3-208	ENST00000475912	SH2B3	Q9UQQ2	575 aa		5.76	□□□□□ -1.49
PRKD3-208	ENST00000475912	SBF1	O95248	1867 aa		5.76	□□□□□ -1.49
PRKD3-208	ENST00000475912	MAP3K19	Q56UN5	1328 aa		5.75	□□□□□ -1.49
PRKD3-208	ENST00000475912	PASK	Q96RG2	1323 aa		5.75	□□□□□ -1.49
PRKD3-208	ENST00000475912	PCDH11X	Q9BZA7	1347 aa		5.75	□□□□□ -1.49
PRKD3-208	ENST00000475912	PCDH11Y	Q9BZA8	1340 aa		5.75	□□□□□ -1.49
PRKD3-208	ENST00000475912	RGPD2	P0DJD1	1756 aa		5.75	□□□□□ -1.49
PRKD3-208	ENST00000475912	TIAM2	Q8IVF5	1701 aa		5.75	□□□□□ -1.49
PRKD3-208	ENST00000475912	LINC01548	A6NM66	108 aa		5.75	□□□□□ -1.49
PRKD3-208	ENST00000475912	TMEM233	B4DJY2	109 aa		5.75	□□□□□ -1.49
PRKD3-208	ENST00000475912	ERC2	O15083	957 aa		5.75	□□□□□ -1.49
PRKD3-208	ENST00000475912	PHGDH	O43175	533 aa	Known RBP	5.75	□□□□□ -1.49
PRKD3-208	ENST00000475912	S100B	P04271	92 aa	Predicted RBP	5.75	□□□□□ -1.49
PRKD3-208	ENST00000475912	CDK4	P11802	303 aa		5.75	□□□□□ -1.49
PRKD3-208	ENST00000475912	ADORA2A	P29274	412 aa		5.75	□□□□□ -1.49
PRKD3-208	ENST00000475912	PDE6C	P51160	858 aa		5.75	□□□□□ -1.49
PRKD3-208	ENST00000475912	SLC13A2	Q13183	592 aa		5.75	□□□□□ -1.49
PRKD3-208	ENST00000475912	PPP2R5A	Q15172	486 aa		5.75	□□□□□ -1.49
PRKD3-208	ENST00000475912	NFE2	Q16621	373 aa	Predicted RBP	5.75	□□□□□ -1.49
PRKD3-208	ENST00000475912	AARS2	Q5JTZ9	985 aa	Known RBP	5.75	□□□□□ -1.49
PRKD3-208	ENST00000475912	FAM102B	Q5T8I3	360 aa		5.75	□□□□□ -1.49
PRKD3-208	ENST00000475912	ZNF782	Q6ZMW2	699 aa	Predicted RBP	5.75	□□□□□ -1.49
PRKD3-208	ENST00000475912	WDR53	Q7Z5U6	358 aa	Predicted RBP	5.75	□□□□□ -1.49
PRKD3-208	ENST00000475912	SLC15A3	Q8IY34	581 aa		5.75	□□□□□ -1.49
PRKD3-208	ENST00000475912	MPP5	Q8N3R9	675 aa		5.75	□□□□□ -1.49
PRKD3-208	ENST00000475912	IL31RA	Q8NI17	732 aa		5.75	□□□□□ -1.49
PRKD3-208	ENST00000475912	DPH1	Q9BZG8	443 aa		5.75	□□□□□ -1.49
PRKD3-208	ENST00000475912	MS4A7	Q9GZW8	240 aa	Predicted RBP	5.75	□□□□□ -1.49
PRKD3-208	ENST00000475912	DUSP22	Q9NRW4	184 aa		5.75	□□□□□ -1.49
PRKD3-208	ENST00000475912	KLHL42	Q9P2K6	505 aa		5.75	□□□□□ -1.49
PRKD3-208	ENST00000475912	ASAP1	Q9ULH1	1129 aa		5.75	□□□□□ -1.49
PRKD3-208	ENST00000475912	CGNL1	Q0VF96	1302 aa		5.74	□□□□□ -1.49
PRKD3-208	ENST00000475912	JTB	O76095	146 aa		5.74	□□□□□ -1.49
PRKD3-208	ENST00000475912	XRCC6	P12956	609 aa	Known RBP eCLIP	5.74	□□□□□ -1.49
PRKD3-208	ENST00000475912	SLC7A1	P30825	629 aa		5.74	□□□□□ -1.49
PRKD3-208	ENST00000475912	DGKE	P52429	567 aa		5.74	□□□□□ -1.49
PRKD3-208	ENST00000475912	DDR1	Q08345	913 aa		5.74	□□□□□ -1.49
PRKD3-208	ENST00000475912	MGAT5B	Q3V5L5	792 aa		5.74	□□□□□ -1.49
PRKD3-208	ENST00000475912	PCID2	Q5JVF3	399 aa		5.74	□□□□□ -1.49
PRKD3-208	ENST00000475912	MAEA	Q7L5Y9	396 aa		5.74	□□□□□ -1.49
PRKD3-208	ENST00000475912	ZNF804A	Q7Z570	1209 aa		5.74	□□□□□ -1.49
PRKD3-208	ENST00000475912	GAS2L3	Q86XJ1	694 aa		5.74	□□□□□ -1.49
PRKD3-208	ENST00000475912	SEMA6D	Q8NFY4	1073 aa		5.74	□□□□□ -1.49
PRKD3-208	ENST00000475912	XAGE5	Q8WWM1	108 aa		5.74	□□□□□ -1.49
PRKD3-208	ENST00000475912	RAPGEF4	Q8WZA2	1011 aa		5.74	□□□□□ -1.49
PRKD3-208	ENST00000475912	TMEM60	Q9H2L4	133 aa		5.74	□□□□□ -1.49
PRKD3-208	ENST00000475912	SMURF2	Q9HAU4	748 aa		5.74	□□□□□ -1.49
PRKD3-208	ENST00000475912	METTL14	Q9HCE5	456 aa	Known RBP	5.74	□□□□□ -1.49
PRKD3-208	ENST00000475912	KDR	P35968	1356 aa		5.74	□□□□□ -1.49
PRKD3-208	ENST00000475912	RAB3GAP2	Q9H2M9	1393 aa		5.74	□□□□□ -1.49
PRKD3-208	ENST00000475912	VIRMA	Q69YN4	1812 aa	Known RBP	5.74	□□□□□ -1.49
PRKD3-208	ENST00000475912	EDC4	Q6P2E9	1401 aa	Known RBP	5.74	□□□□□ -1.49
PRKD3-208	ENST00000475912	CAPN8	A6NHC0	703 aa		5.73	□□□□□ -1.49
PRKD3-208	ENST00000475912	SMIM22	K7EJ46	135 aa		5.73	□□□□□ -1.49
PRKD3-208	ENST00000475912	TBX3	O15119	743 aa		5.73	□□□□□ -1.49
PRKD3-208	ENST00000475912	TBC1D4	O60343	1298 aa		5.73	□□□□□ -1.49
PRKD3-208	ENST00000475912	NHLRC4	P0CG21	123 aa	Predicted RBP	5.73	□□□□□ -1.49
PRKD3-208	ENST00000475912	EN2	P19622	333 aa	Predicted RBP	5.73	□□□□□ -1.49
PRKD3-208	ENST00000475912	CYP4F2	P78329	520 aa		5.73	□□□□□ -1.49
PRKD3-208	ENST00000475912	SLC10A2	Q12908	348 aa	Predicted RBP	5.73	□□□□□ -1.49
PRKD3-208	ENST00000475912	LLGL1	Q15334	1064 aa		5.73	□□□□□ -1.49
PRKD3-208	ENST00000475912	MINDY4	Q4G0A6	757 aa		5.73	□□□□□ -1.49
PRKD3-208	ENST00000475912	PLA1A	Q53H76	456 aa		5.73	□□□□□ -1.49
PRKD3-208	ENST00000475912	NAPRT	Q6XQN6	538 aa		5.73	□□□□□ -1.49
PRKD3-208	ENST00000475912	KIAA0319L	Q8IZA0	1049 aa		5.73	□□□□□ -1.49
PRKD3-208	ENST00000475912	OSCP1	Q8WVF1	389 aa		5.73	□□□□□ -1.49
PRKD3-208	ENST00000475912	JDP2	Q8WYK2	163 aa		5.73	□□□□□ -1.49
PRKD3-208	ENST00000475912	MAML1	Q92585	1016 aa		5.73	□□□□□ -1.49
PRKD3-208	ENST00000475912	MACROD1	Q9BQ69	325 aa		5.73	□□□□□ -1.49
PRKD3-208	ENST00000475912	FSD1L	Q9BXM9	530 aa		5.73	□□□□□ -1.49
PRKD3-208	ENST00000475912	C22orf23	Q9BZE7	217 aa		5.73	□□□□□ -1.49
PRKD3-208	ENST00000475912	ITGB4	P16144	1822 aa		5.73	□□□□□ -1.49
PRKD3-208	ENST00000475912		A0A1W2PP64	1363 aa		5.72	□□□□□ -1.49
PRKD3-208	ENST00000475912	DNAJC9-AS1	A6NH13	148 aa		5.72	□□□□□ -1.49
PRKD3-208	ENST00000475912	FAM227A	F5H4B4	570 aa		5.72	□□□□□ -1.49
PRKD3-208	ENST00000475912	VNN1	O95497	513 aa		5.72	□□□□□ -1.49
PRKD3-208	ENST00000475912	CELA2A	P08217	269 aa		5.72	□□□□□ -1.49
PRKD3-208	ENST00000475912	NPS	P0C0P6	89 aa		5.72	□□□□□ -1.49
PRKD3-208	ENST00000475912	U2AF1L5	P0DN76	240 aa	Predicted RBP	5.72	□□□□□ -1.49
PRKD3-208	ENST00000475912	AMPH	P49418	695 aa		5.72	□□□□□ -1.49
PRKD3-208	ENST00000475912	PRKAG1	P54619	331 aa		5.72	□□□□□ -1.49
PRKD3-208	ENST00000475912	TPTE	P56180	551 aa		5.72	□□□□□ -1.49
PRKD3-208	ENST00000475912	U2AF1	Q01081	240 aa	Known RBP eCLIP	5.72	□□□□□ -1.49
PRKD3-208	ENST00000475912	GRM1	Q13255	1194 aa		5.72	□□□□□ -1.49
PRKD3-208	ENST00000475912	RAB32	Q13637	225 aa		5.72	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms