RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.51□□□□□ -1.21
SMC5-203ENST00000475540 SLC18B1Q6NT16 456 aa7.51□□□□□ -1.21
SMC5-203ENST00000475540 DCDC5Q6ZRR9 648 aa7.51□□□□□ -1.21
SMC5-203ENST00000475540 YTHDF3Q7Z739 585 aaKnown RBP7.51□□□□□ -1.21
SMC5-203ENST00000475540 CCDC28AQ8IWP9 274 aa7.51□□□□□ -1.21
SMC5-203ENST00000475540 MYD88Q99836 296 aa7.51□□□□□ -1.21
SMC5-203ENST00000475540 SH2D3AQ9BRG2 576 aa7.51□□□□□ -1.21
SMC5-203ENST00000475540 QTRT1Q9BXR0 403 aaKnown RBP7.51□□□□□ -1.21
SMC5-203ENST00000475540 PCDHAC1Q9H158 963 aa7.51□□□□□ -1.21
SMC5-203ENST00000475540 WDR17Q8IZU2 1322 aa7.51□□□□□ -1.21
SMC5-203ENST00000475540 DNAJC9-AS1A6NH13 148 aa7.5□□□□□ -1.21
SMC5-203ENST00000475540 CLIC1O00299 241 aa7.5□□□□□ -1.21
SMC5-203ENST00000475540 ZSCAN9O15535 394 aaPredicted RBP7.5□□□□□ -1.21
SMC5-203ENST00000475540 CA12O43570 354 aa7.5□□□□□ -1.21
SMC5-203ENST00000475540 NDST3O95803 873 aa7.5□□□□□ -1.21
SMC5-203ENST00000475540 CCDC15Q0P6D6 951 aa7.5□□□□□ -1.21
SMC5-203ENST00000475540 PMS2P11Q13670 270 aa7.5□□□□□ -1.21
SMC5-203ENST00000475540 KCNB1Q14721 858 aa7.5□□□□□ -1.21
SMC5-203ENST00000475540 MFSD13AQ14CX5 517 aa7.5□□□□□ -1.21
SMC5-203ENST00000475540 MTX3Q5HYI7 312 aa7.5□□□□□ -1.21
SMC5-203ENST00000475540 IZUMO3Q5VZ72 239 aa7.5□□□□□ -1.21
SMC5-203ENST00000475540 ABLIM2Q6H8Q1 611 aa7.5□□□□□ -1.21
SMC5-203ENST00000475540 NEK8Q86SG6 692 aa7.5□□□□□ -1.21
SMC5-203ENST00000475540 C16orf71Q8IYS4 520 aaPredicted RBP7.5□□□□□ -1.21
SMC5-203ENST00000475540 GALNT16Q8N428 558 aa7.5□□□□□ -1.21
SMC5-203ENST00000475540 OR2C3Q8N628 320 aa7.5□□□□□ -1.21
SMC5-203ENST00000475540 ZNF566Q969W8 418 aa7.5□□□□□ -1.21
SMC5-203ENST00000475540 EDC3Q96F86 508 aaKnown RBP7.5□□□□□ -1.21
SMC5-203ENST00000475540 SLC29A3Q9BZD2 475 aa7.5□□□□□ -1.21
SMC5-203ENST00000475540 MAFFQ9ULX9 164 aa7.5□□□□□ -1.21
SMC5-203ENST00000475540 ARP10275 920 aa7.49□□□□□ -1.21
SMC5-203ENST00000475540 GABRB3P28472 473 aa7.49□□□□□ -1.21
SMC5-203ENST00000475540 SLC5A2P31639 672 aa7.49□□□□□ -1.21
SMC5-203ENST00000475540 MTAPQ13126 283 aa7.49□□□□□ -1.21
SMC5-203ENST00000475540 RAP1GAP2Q684P5 730 aa7.49□□□□□ -1.21
SMC5-203ENST00000475540 GRHL2Q6ISB3 625 aa7.49□□□□□ -1.21
SMC5-203ENST00000475540 RANBP10Q6VN20 620 aa7.49□□□□□ -1.21
SMC5-203ENST00000475540 ZNF813Q6ZN06 617 aa7.49□□□□□ -1.21
SMC5-203ENST00000475540 GRAMD1AQ96CP6 724 aa7.49□□□□□ -1.21
SMC5-203ENST00000475540 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.49□□□□□ -1.21
SMC5-203ENST00000475540 ZNF804BA4D1E1 1349 aa7.49□□□□□ -1.21
SMC5-203ENST00000475540 SETD1BQ9UPS6 1966 aaKnown RBP7.48□□□□□ -1.21
SMC5-203ENST00000475540 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.48□□□□□ -1.21
SMC5-203ENST00000475540 RNF8O76064 485 aa7.48□□□□□ -1.21
SMC5-203ENST00000475540 PBX1P40424 430 aa7.48□□□□□ -1.21
SMC5-203ENST00000475540 GPC5P78333 572 aa7.48□□□□□ -1.21
SMC5-203ENST00000475540 DNASE1L3Q13609 305 aa7.48□□□□□ -1.21
SMC5-203ENST00000475540 FBXO38Q6PIJ6 1188 aa7.48□□□□□ -1.21
SMC5-203ENST00000475540 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.48□□□□□ -1.21
SMC5-203ENST00000475540 GLIS1Q8NBF1 620 aa7.48□□□□□ -1.21
SMC5-203ENST00000475540 EFHD1Q9BUP0 239 aa7.48□□□□□ -1.21
SMC5-203ENST00000475540 CERS4Q9HA82 394 aa7.48□□□□□ -1.21
SMC5-203ENST00000475540 PDGFCQ9NRA1 345 aa7.48□□□□□ -1.21
SMC5-203ENST00000475540 RGL1Q9NZL6 768 aa7.48□□□□□ -1.21
SMC5-203ENST00000475540 FZD4Q9ULV1 537 aa7.48□□□□□ -1.21
SMC5-203ENST00000475540 SMIM35A0A1B0GVV1 85 aa7.47□□□□□ -1.21
SMC5-203ENST00000475540 WDR91A4D1P6 747 aa7.47□□□□□ -1.21
SMC5-203ENST00000475540 DSCR3O14972 297 aa7.47□□□□□ -1.21
SMC5-203ENST00000475540 HNRNPDLO14979 420 aaKnown RBP7.47□□□□□ -1.21
SMC5-203ENST00000475540 FYB1O15117 783 aa7.47□□□□□ -1.21
SMC5-203ENST00000475540 PLIN1O60240 522 aa7.47□□□□□ -1.21
SMC5-203ENST00000475540 TMIGD3P0DMS9 266 aaPredicted RBP7.47□□□□□ -1.21
SMC5-203ENST00000475540 ATF7P17544 494 aaPredicted RBP7.47□□□□□ -1.21
SMC5-203ENST00000475540 EGR1P18146 543 aa7.47□□□□□ -1.21
SMC5-203ENST00000475540 EEF1GP26641 437 aaKnown RBP7.47□□□□□ -1.21
SMC5-203ENST00000475540 MST1P26927 711 aa7.47□□□□□ -1.21
SMC5-203ENST00000475540 KCNJ12Q14500 433 aa7.47□□□□□ -1.21
SMC5-203ENST00000475540 SLC5A9Q2M3M2 681 aa7.47□□□□□ -1.21
SMC5-203ENST00000475540 SLC35G1Q2M3R5 365 aa7.47□□□□□ -1.21
SMC5-203ENST00000475540 AASDHQ4L235 1098 aaPredicted RBP7.47□□□□□ -1.21
SMC5-203ENST00000475540 CC2D1BQ5T0F9 858 aaKnown RBP7.47□□□□□ -1.21
SMC5-203ENST00000475540 TLDC1Q6P9B6 456 aa7.47□□□□□ -1.21
SMC5-203ENST00000475540 SRLQ86TD4 932 aa7.47□□□□□ -1.21
SMC5-203ENST00000475540 CNGA4Q8IV77 575 aa7.47□□□□□ -1.21
SMC5-203ENST00000475540 WDR24Q96S15 920 aa7.47□□□□□ -1.21
SMC5-203ENST00000475540 GDF15Q99988 308 aa7.47□□□□□ -1.21
SMC5-203ENST00000475540 FAM118BQ9BPY3 351 aa7.47□□□□□ -1.21
SMC5-203ENST00000475540 ADGRE3Q9BY15 652 aa7.47□□□□□ -1.21
SMC5-203ENST00000475540 VPS45Q9NRW7 570 aa7.47□□□□□ -1.21
SMC5-203ENST00000475540 FAM234BA2RU67 622 aa7.46□□□□□ -1.22
SMC5-203ENST00000475540 PRAMEF2O60811 474 aa7.46□□□□□ -1.22
SMC5-203ENST00000475540 ATP1A4Q13733 1029 aa7.46□□□□□ -1.22
SMC5-203ENST00000475540 ZNF268Q14587 947 aaPredicted RBP7.46□□□□□ -1.22
SMC5-203ENST00000475540 MAPKAPK3Q16644 382 aa7.46□□□□□ -1.22
SMC5-203ENST00000475540 SUPT20HL1Q3ZLR7 823 aa7.46□□□□□ -1.22
SMC5-203ENST00000475540 MAP9Q49MG5 647 aa7.46□□□□□ -1.22
SMC5-203ENST00000475540 AWAT1Q58HT5 328 aa7.46□□□□□ -1.22
SMC5-203ENST00000475540 ZNF626Q68DY1 528 aa7.46□□□□□ -1.22
SMC5-203ENST00000475540 FAM186BQ8IYM0 893 aa7.46□□□□□ -1.22
SMC5-203ENST00000475540 ACRBPQ8NEB7 543 aa7.46□□□□□ -1.22
SMC5-203ENST00000475540 PRR11Q96HE9 360 aaPredicted RBP7.46□□□□□ -1.22
SMC5-203ENST00000475540 HIC2Q96JB3 615 aa7.46□□□□□ -1.22
SMC5-203ENST00000475540 SAP30LQ9HAJ7 183 aa7.46□□□□□ -1.22
SMC5-203ENST00000475540 COL3A1P02461 1466 aaPredicted RBP7.45□□□□□ -1.22
SMC5-203ENST00000475540 CYP2D7A0A087X1C5 515 aa7.45□□□□□ -1.22
SMC5-203ENST00000475540 VIPP01282 170 aa7.45□□□□□ -1.22
SMC5-203ENST00000475540 SRGAP2BP0DMP2 458 aa7.45□□□□□ -1.22
SMC5-203ENST00000475540 DRD1P21728 446 aa7.45□□□□□ -1.22
SMC5-203ENST00000475540 GALNSP34059 522 aa7.45□□□□□ -1.22
SMC5-203ENST00000475540 SSBP2P81877 361 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms