RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 GOLGA6L19H0YKK7 550 aa16.99■□□□□ 0.31
SRM-204ENST00000475189 PAPSS1O43252 624 aaPredicted RBP16.99■□□□□ 0.31
SRM-204ENST00000475189 NFATC1O95644 943 aa16.99■□□□□ 0.31
SRM-204ENST00000475189 LTFP02788 710 aa16.99■□□□□ 0.31
SRM-204ENST00000475189 DCNP07585 359 aaKnown RBP16.99■□□□□ 0.31
SRM-204ENST00000475189 STAT1P42224 750 aa16.99■□□□□ 0.31
SRM-204ENST00000475189 FZD5Q13467 585 aa16.99■□□□□ 0.31
SRM-204ENST00000475189 TAF3Q5VWG9 929 aa16.99■□□□□ 0.31
SRM-204ENST00000475189 C1orf228Q6PIY5 440 aa16.99■□□□□ 0.31
SRM-204ENST00000475189 C1orf131Q8NDD1 294 aaKnown RBP16.99■□□□□ 0.31
SRM-204ENST00000475189 EPS8L1Q8TE68 723 aa16.99■□□□□ 0.31
SRM-204ENST00000475189 CPXM1Q96SM3 734 aa16.99■□□□□ 0.31
SRM-204ENST00000475189 TSPY26PQ9H489 355 aa16.99■□□□□ 0.31
SRM-204ENST00000475189 OLA1Q9NTK5 396 aaKnown RBP16.99■□□□□ 0.31
SRM-204ENST00000475189 MARCH2Q9P0N8 246 aa16.99■□□□□ 0.31
SRM-204ENST00000475189 TBC1D14Q9P2M4 693 aa16.99■□□□□ 0.31
SRM-204ENST00000475189 NDRG2Q9UN36 371 aaKnown RBP16.99■□□□□ 0.31
SRM-204ENST00000475189 ATG2BQ96BY7 2078 aa16.99■□□□□ 0.31
SRM-204ENST00000475189 CACNA1IQ9P0X4 2223 aa16.98■□□□□ 0.31
SRM-204ENST00000475189 A0A1W2PQC6 194 aa16.98■□□□□ 0.31
SRM-204ENST00000475189 STC2O76061 302 aa16.98■□□□□ 0.31
SRM-204ENST00000475189 CYP17A1P05093 508 aa16.98■□□□□ 0.31
SRM-204ENST00000475189 CDH5P33151 784 aaPredicted RBP16.98■□□□□ 0.31
SRM-204ENST00000475189 GJA4P35212 333 aa16.98■□□□□ 0.31
SRM-204ENST00000475189 COG7P83436 770 aa16.98■□□□□ 0.31
SRM-204ENST00000475189 GOLGA8FQ08AF8 430 aa16.98■□□□□ 0.31
SRM-204ENST00000475189 GOLGA8DPQ0D2H9 430 aa16.98■□□□□ 0.31
SRM-204ENST00000475189 NR1H3Q13133 447 aa16.98■□□□□ 0.31
SRM-204ENST00000475189 PON2Q15165 354 aa16.98■□□□□ 0.31
SRM-204ENST00000475189 BBS7Q8IWZ6 715 aa16.98■□□□□ 0.31
SRM-204ENST00000475189 RNF139Q8WU17 664 aa16.98■□□□□ 0.31
SRM-204ENST00000475189 SLC20A1Q8WUM9 679 aa16.98■□□□□ 0.31
SRM-204ENST00000475189 CLDN23Q96B33 292 aa16.98■□□□□ 0.31
SRM-204ENST00000475189 OTUB2Q96DC9 234 aa16.98■□□□□ 0.31
SRM-204ENST00000475189 FAM122AQ96E09 287 aa16.98■□□□□ 0.31
SRM-204ENST00000475189 PPP1R13BQ96KQ4 1090 aa16.98■□□□□ 0.31
SRM-204ENST00000475189 PDCL3Q9H2J4 239 aa16.98■□□□□ 0.31
SRM-204ENST00000475189 SFMBT1Q9UHJ3 866 aa16.98■□□□□ 0.31
SRM-204ENST00000475189 NOCTQ9UK39 431 aaKnown RBP16.98■□□□□ 0.31
SRM-204ENST00000475189 STRIP2Q9ULQ0 834 aa16.98■□□□□ 0.31
SRM-204ENST00000475189 SLC12A8A0AV02 714 aa16.97■□□□□ 0.31
SRM-204ENST00000475189 SART1O43290 800 aaKnown RBP16.97■□□□□ 0.31
SRM-204ENST00000475189 FYNP06241 537 aa16.97■□□□□ 0.31
SRM-204ENST00000475189 HMBSP08397 361 aa16.97■□□□□ 0.31
SRM-204ENST00000475189 MMEP08473 750 aa16.97■□□□□ 0.31
SRM-204ENST00000475189 DHCR24Q15392 516 aa16.97■□□□□ 0.31
SRM-204ENST00000475189 GAB4Q2WGN9 574 aa16.97■□□□□ 0.31
SRM-204ENST00000475189 PTPN20Q4JDL3 420 aa16.97■□□□□ 0.31
SRM-204ENST00000475189 MSANTD2Q6P1R3 559 aa16.97■□□□□ 0.31
SRM-204ENST00000475189 RHBDF2Q6PJF5 856 aa16.97■□□□□ 0.31
SRM-204ENST00000475189 Q6ZNB5 142 aa16.97■□□□□ 0.31
SRM-204ENST00000475189 ZNF677Q86XU0 584 aa16.97■□□□□ 0.31
SRM-204ENST00000475189 FMNL3Q8IVF7 1028 aa16.97■□□□□ 0.31
SRM-204ENST00000475189 TMEM35BQ8NCS4 154 aa16.97■□□□□ 0.31
SRM-204ENST00000475189 GOLGA1Q92805 767 aa16.97■□□□□ 0.31
SRM-204ENST00000475189 NOX5Q96PH1 765 aa16.97■□□□□ 0.31
SRM-204ENST00000475189 LSM7Q9UK45 103 aaKnown RBP16.97■□□□□ 0.31
SRM-204ENST00000475189 ARIH1Q9Y4X5 557 aaPredicted RBP16.97■□□□□ 0.31
SRM-204ENST00000475189 CEP83Q9Y592 693 aa16.97■□□□□ 0.31
SRM-204ENST00000475189 MUC6Q6W4X9 2439 aa16.96■□□□□ 0.31
SRM-204ENST00000475189 TRDMT1O14717 391 aaKnown RBP16.96■□□□□ 0.31
SRM-204ENST00000475189 NCAM2O15394 837 aa16.96■□□□□ 0.31
SRM-204ENST00000475189 KLKB1P03952 638 aa16.96■□□□□ 0.31
SRM-204ENST00000475189 CHRNB1P11230 501 aa16.96■□□□□ 0.31
SRM-204ENST00000475189 CHRNB2P17787 502 aa16.96■□□□□ 0.31
SRM-204ENST00000475189 NUBP1P53384 320 aa16.96■□□□□ 0.31
SRM-204ENST00000475189 UBASH3AP57075 661 aa16.96■□□□□ 0.31
SRM-204ENST00000475189 AMPD2Q01433 879 aa16.96■□□□□ 0.31
SRM-204ENST00000475189 FMO1Q01740 532 aa16.96■□□□□ 0.31
SRM-204ENST00000475189 NAIF1Q69YI7 327 aaPredicted RBP16.96■□□□□ 0.31
SRM-204ENST00000475189 CACNA2D4Q7Z3S7 1137 aa16.96■□□□□ 0.31
SRM-204ENST00000475189 DTWD2Q8NBA8 298 aa16.96■□□□□ 0.31
SRM-204ENST00000475189 BAP1Q92560 729 aa16.96■□□□□ 0.31
SRM-204ENST00000475189 FAM149B1Q96BN6 582 aa16.96■□□□□ 0.31
SRM-204ENST00000475189 PIWIL1Q96J94 861 aaKnown RBP16.96■□□□□ 0.31
SRM-204ENST00000475189 LMAN1LQ9HAT1 526 aa16.96■□□□□ 0.31
SRM-204ENST00000475189 HCN4Q9Y3Q4 1203 aa16.96■□□□□ 0.31
SRM-204ENST00000475189 GALR2O43603 387 aaPredicted RBP16.95■□□□□ 0.3
SRM-204ENST00000475189 LSM8O95777 96 aaKnown RBP16.95■□□□□ 0.3
SRM-204ENST00000475189 ERBB2P04626 1255 aa16.95■□□□□ 0.3
SRM-204ENST00000475189 NCAM1P13591 858 aa16.95■□□□□ 0.3
SRM-204ENST00000475189 PBX1P40424 430 aa16.95■□□□□ 0.3
SRM-204ENST00000475189 RPS9P46781 194 aaKnown RBP16.95■□□□□ 0.3
SRM-204ENST00000475189 GALK1P51570 392 aa16.95■□□□□ 0.3
SRM-204ENST00000475189 CDR2Q01850 454 aa16.95■□□□□ 0.3
SRM-204ENST00000475189 TAF5Q15542 800 aa16.95■□□□□ 0.3
SRM-204ENST00000475189 TRIP4Q15650 581 aaPredicted RBP16.95■□□□□ 0.3
SRM-204ENST00000475189 LY6G5CQ5SRR4 150 aa16.95■□□□□ 0.3
SRM-204ENST00000475189 OR6B2Q6IFH4 312 aa16.95■□□□□ 0.3
SRM-204ENST00000475189 FAM183BPQ6ZVS7 135 aa16.95■□□□□ 0.3
SRM-204ENST00000475189 BEND5Q7L4P6 421 aa16.95■□□□□ 0.3
SRM-204ENST00000475189 PRSS33Q8NF86 280 aa16.95■□□□□ 0.3
SRM-204ENST00000475189 PLD4Q96BZ4 506 aa16.95■□□□□ 0.3
SRM-204ENST00000475189 DCLK3Q9C098 648 aa16.95■□□□□ 0.3
SRM-204ENST00000475189 KCNH6Q9H252 994 aa16.95■□□□□ 0.3
SRM-204ENST00000475189 FBRSL1Q9HCM7 1045 aaKnown RBP16.95■□□□□ 0.3
SRM-204ENST00000475189 SPHK2Q9NRA0 654 aa16.95■□□□□ 0.3
SRM-204ENST00000475189 NAALADL1Q9UQQ1 740 aa16.95■□□□□ 0.3
SRM-204ENST00000475189 HBS1LQ9Y450 684 aaKnown RBP16.95■□□□□ 0.3
SRM-204ENST00000475189 KIAA1549LQ6ZVL6 1849 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms