RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 EPHA3P29320 983 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 PPARGP37231 505 aaPredicted RBP4.26□□□□□ -1.73
USP16-205ENST00000474835 POLE2P56282 527 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 PPARDQ03181 441 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 TNIP1Q15025 636 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 GRIK5Q16478 980 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 DUSP7Q16829 419 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 GTDC1Q4AE62 458 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 FAM26FQ5R3K3 315 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 GJC2Q5T442 439 aaPredicted RBP4.26□□□□□ -1.73
USP16-205ENST00000474835 METTL21CQ5VZV1 264 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 LPCAT4Q643R3 524 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 SLFN13Q68D06 897 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 TTC23LQ6PF05 361 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 OTUD6AQ7L8S5 288 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 BORCS5Q969J3 196 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 ISG20Q96AZ6 181 aaKnown RBP4.26□□□□□ -1.73
USP16-205ENST00000474835 CLIP3Q96DZ5 547 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 PDLIM5Q96HC4 596 aaKnown RBP4.26□□□□□ -1.73
USP16-205ENST00000474835 CLPTM1LQ96KA5 538 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 FAM84BQ96KN1 310 aaPredicted RBP4.26□□□□□ -1.73
USP16-205ENST00000474835 SLITRK1Q96PX8 696 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 RUSC1Q9BVN2 902 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 C1QTNF1Q9BXJ1 281 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 EIF2AQ9BY44 585 aaKnown RBP4.26□□□□□ -1.73
USP16-205ENST00000474835 MANSC1Q9H8J5 431 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 PCDH9Q9HC56 1237 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 WRAP73Q9P2S5 460 aaPredicted RBP4.26□□□□□ -1.73
USP16-205ENST00000474835 EBF1Q9UH73 591 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 DNAJC12Q9UKB3 198 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 COQ6Q9Y2Z9 468 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 TTC34A8MYJ7 566 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 K7EPI3 171 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 FOXN3O00409 490 aaPredicted RBP4.26□□□□□ -1.73
USP16-205ENST00000474835 BET1O15155 118 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 TADA2AO75478 443 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 ABCB1P08183 1280 aaPredicted RBP4.26□□□□□ -1.73
USP16-205ENST00000474835 HOXB1P14653 301 aaPredicted RBP4.26□□□□□ -1.73
USP16-205ENST00000474835 CTRB1P17538 263 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 CDKN2BP42772 138 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 HSPA13P48723 471 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 BMXP51813 675 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 NCKAP1LP55160 1127 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 AP2B1P63010 937 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 MS4A2Q01362 244 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 PCLAFQ15004 111 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 KCNJ8Q15842 424 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 MUM1Q2TAK8 710 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 SPATS1Q496A3 300 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 EFHC1Q5JVL4 640 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 IFIT1BQ5T764 474 aaKnown RBP4.26□□□□□ -1.73
USP16-205ENST00000474835 CTRB2Q6GPI1 263 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 ACAD10Q6JQN1 1059 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 TRIM72Q6ZMU5 477 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 ZNF720Q7Z2F6 126 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 CATIPQ7Z7H3 387 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 PATL1Q86TB9 770 aaKnown RBP4.26□□□□□ -1.73
USP16-205ENST00000474835 ZNF598Q86UK7 904 aaKnown RBP4.26□□□□□ -1.73
USP16-205ENST00000474835 SIAH1Q8IUQ4 282 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 GLYCTKQ8IVS8 523 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 BBOF1Q8ND07 529 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 PJA1Q8NG27 643 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 CXorf38Q8TB03 319 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 RASGRP4Q8TDF6 673 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 TCP10LQ8TDR4 215 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 INTS2Q9H0H0 1204 aaKnown RBP4.26□□□□□ -1.73
USP16-205ENST00000474835 NAPBQ9H115 298 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 TOPORSQ9NS56 1045 aaPredicted RBP4.26□□□□□ -1.73
USP16-205ENST00000474835 PCDHA12Q9UN75 941 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 SOX13Q9UN79 622 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 MYO16Q9Y6X6 1858 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 DOCK4Q8N1I0 1966 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 VCANP13611 3396 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 ENPP3O14638 875 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 MGEA5O60502 916 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 TMEM63AO94886 807 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 HAUS5O94927 633 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 NR3C1P04150 777 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 BPGMP07738 259 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 HOXB9P17482 250 aaPredicted RBP4.25□□□□□ -1.73
USP16-205ENST00000474835 XBP1P17861 261 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 HSPA1LP34931 641 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 STAT1P42224 750 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 RPL34P49207 117 aaKnown RBP4.25□□□□□ -1.73
USP16-205ENST00000474835 HK2P52789 917 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 GAD2Q05329 585 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 KCNA1Q09470 495 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 AQP6Q13520 282 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 PRPF4BQ13523 1007 aaKnown RBP4.25□□□□□ -1.73
USP16-205ENST00000474835 ITGA7Q13683 1181 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 IKBKEQ14164 716 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 DRAP1Q14919 205 aaPredicted RBP4.25□□□□□ -1.73
USP16-205ENST00000474835 LRIT3Q3SXY7 679 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 TREML2Q5T2D2 321 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 ZFP1Q6P2D0 407 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 FASTKD5Q7L8L6 764 aaKnown RBP4.25□□□□□ -1.73
USP16-205ENST00000474835 POLNQ7Z5Q5 900 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 ZC3H18Q86VM9 953 aaKnown RBP4.25□□□□□ -1.73
USP16-205ENST00000474835 CATSPER3Q86XQ3 398 aa4.25□□□□□ -1.73
USP16-205ENST00000474835 GSTCDQ8NEC7 633 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms