RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 ZNF252P-AS1Q0IIN9 211 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 EIF4EBP2Q13542 120 aaPredicted RBP10.47□□□□□ -0.73
COL8A1-206ENST00000474648 SLC5A9Q2M3M2 681 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 PABPC1LQ4VXU2 614 aaKnown RBP10.47□□□□□ -0.73
COL8A1-206ENST00000474648 OTUD1Q5VV17 481 aaPredicted RBP10.47□□□□□ -0.73
COL8A1-206ENST00000474648 BTBD8Q5XKL5 378 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 DCUN1D2Q6PH85 259 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 BNIPLQ7Z465 357 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 RHOT2Q8IXI1 618 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 MICALL1Q8N3F8 863 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 RNF10Q8N5U6 811 aaKnown RBP10.47□□□□□ -0.73
COL8A1-206ENST00000474648 ARFGAP1Q8N6T3 406 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 PDZD8Q8NEN9 1154 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 ZNF564Q8TBZ8 553 aaPredicted RBP10.47□□□□□ -0.73
COL8A1-206ENST00000474648 CENPIQ92674 756 aaPredicted RBP10.47□□□□□ -0.73
COL8A1-206ENST00000474648 FAM149B1Q96BN6 582 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 TRIM44Q96DX7 344 aaPredicted RBP10.47□□□□□ -0.73
COL8A1-206ENST00000474648 MCEEQ96PE7 176 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 SLITRK1Q96PX8 696 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 NPY6RQ99463 290 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 ADAM7Q9H2U9 754 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 CCSER2Q9H7U1 834 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 ASAH2Q9NR71 780 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 ABCC13Q9NSE7 274 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.47□□□□□ -0.73
COL8A1-206ENST00000474648 CALCOCO1Q9P1Z2 691 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 CDH22Q9UJ99 828 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 NUDT5Q9UKK9 219 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 ZKSCAN5Q9Y2L8 839 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 A0A1W2PRU2 124 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 C2orf78A6NCI8 922 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 DPYSL4O14531 572 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 BUB1O43683 1085 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 ENDOD1O94919 500 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 FGF19O95750 216 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 OAS1P00973 400 aaKnown RBP10.46□□□□□ -0.73
COL8A1-206ENST00000474648 IGLV3-25P01717 112 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 SRGAP2BP0DMP2 458 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 NCAM1P13591 858 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 FOSL2P15408 326 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 GJA1P17302 382 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 TFE3P19532 575 aaPredicted RBP10.46□□□□□ -0.73
COL8A1-206ENST00000474648 GPD1P21695 349 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 NOP2P46087 812 aaKnown RBP10.46□□□□□ -0.73
COL8A1-206ENST00000474648 CYP4F8P98187 520 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 CCDC85BQ15834 202 aaPredicted RBP10.46□□□□□ -0.73
COL8A1-206ENST00000474648 RAB6CQ53S08 254 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 DCAF6Q58WW2 860 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 SH3PXD2AQ5TCZ1 1133 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 TXNDC8Q6A555 127 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 MSANTD2Q6P1R3 559 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 PDZD4Q76G19 769 aaPredicted RBP10.46□□□□□ -0.73
COL8A1-206ENST00000474648 CPNE8Q86YQ8 564 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 TXLNBQ8N3L3 684 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 LEMD2Q8NC56 503 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 TPCN2Q8NHX9 752 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 ITFG1Q8TB96 612 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 DQX1Q8TE96 717 aaKnown RBP10.46□□□□□ -0.73
COL8A1-206ENST00000474648 FNIP1Q8TF40 1166 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 CFAP57Q96MR6 1250 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 CYP2S1Q96SQ9 504 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 SLC46A2Q9BY10 475 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 TSGA10Q9BZW7 698 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 RNF38Q9H0F5 515 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 RAB6CQ9H0N0 254 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 ATXN3LQ9H3M9 355 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 PIDD1Q9HB75 910 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 LZTFL1Q9NQ48 299 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 ANAPC7Q9UJX3 599 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 GUCA1BQ9UMX6 200 aa10.46□□□□□ -0.73
COL8A1-206ENST00000474648 MACROD2A1Z1Q3 448 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 MYO1FO00160 1098 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 ZNF197O14709 1029 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 CAPN9O14815 690 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 MDM4O15151 490 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 COCHO43405 550 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 KRT86O43790 486 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 BUB1BO60566 1050 aaPredicted RBP10.45□□□□□ -0.74
COL8A1-206ENST00000474648 TLR5O60602 858 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 PROSCO94903 275 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 MOCS3O95396 460 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 OLFM2O95897 454 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 RALAP11233 206 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 CDC25CP30307 473 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 PTPN9P43378 593 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 TUBP50607 506 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 ITIH3Q06033 890 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 TEAD2Q15562 447 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 C15orf59Q2T9L4 293 aaPredicted RBP10.45□□□□□ -0.74
COL8A1-206ENST00000474648 SLC25A52Q3SY17 297 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 ATAT1Q5SQI0 421 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 HECTD3Q5T447 861 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 STXBP5Q5T5C0 1151 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 KLHDC10Q6PID8 442 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 SLFN11Q7Z7L1 901 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 NIPA2Q8N8Q9 360 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 LRRC57Q8N9N7 239 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 GOLGA1Q92805 767 aa10.45□□□□□ -0.74
COL8A1-206ENST00000474648 PGAP3Q96FM1 320 aaPredicted RBP10.45□□□□□ -0.74
COL8A1-206ENST00000474648 CALR3Q96L12 384 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms