RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 PARP9Q8IXQ6 854 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 FAM174AQ8TBP5 190 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 IRF7Q92985 503 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 NXPE3Q969Y0 559 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 NRBF2Q96F24 287 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 HES6Q96HZ4 224 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 FGD4Q96M96 766 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 YIPF2Q9BWQ6 316 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 TRIM55Q9BYV6 548 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 UNC93B1Q9H1C4 597 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 IL23AQ9NPF7 189 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 LATS2Q9NRM7 1088 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 SNTG2Q9NY99 539 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 PSME2Q9UL46 239 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 KLHL33A6NCF5 533 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 CCDC22O60826 627 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 CLDN11O75508 207 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 LMNAP02545 664 aaKnown RBP4.77□□□□□ -1.65
CCNL1-215ENST00000474539 VTNP04004 478 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 CYP11B1P15538 503 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 HDCP19113 662 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 TLX1P31314 330 aaPredicted RBP4.77□□□□□ -1.65
CCNL1-215ENST00000474539 SUOXP51687 545 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 TKTL1P51854 596 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 ERVK-21P61565 698 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 IRX5P78411 483 aaPredicted RBP4.77□□□□□ -1.65
CCNL1-215ENST00000474539 DAB2P98082 770 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 TMEM62Q0P6H9 643 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 EFEMP1Q12805 493 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 LY6KQ17RY6 165 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 XKR4Q5GH76 650 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 MDH1BQ5I0G3 518 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 SCARA3Q6AZY7 606 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 OTOP1Q7RTM1 612 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 ADCK2Q7Z695 626 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 LRRC8AQ8IWT6 810 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 OXR1Q8N573 874 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 TMEM159Q96B96 161 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 PRICKLE1Q96MT3 831 aaPredicted RBP4.77□□□□□ -1.65
CCNL1-215ENST00000474539 RAD9AQ99638 391 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 SH3GL1Q99961 368 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 RAB11FIP5Q9BXF6 653 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 SLC32A1Q9H598 525 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 RMND5AQ9H871 391 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 NMRK2Q9NPI5 230 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 SMYD2Q9NRG4 433 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 GTSE1Q9NYZ3 720 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 NCKIPSDQ9NZQ3 722 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 ENOPH1Q9UHY7 261 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 ST3GAL5Q9UNP4 418 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.77□□□□□ -1.65
CCNL1-215ENST00000474539 LTBP4Q8N2S1 1624 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 NWD2Q9ULI1 1742 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 MAP2P11137 1827 aaKnown RBP4.77□□□□□ -1.65
CCNL1-215ENST00000474539 OPHN1O60890 802 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 RHOBTB1O94844 696 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 CATP04040 527 aaKnown RBP4.77□□□□□ -1.65
CCNL1-215ENST00000474539 OXTRP30559 389 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 AKT2P31751 481 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 MRPS22P82650 360 aaKnown RBP4.77□□□□□ -1.65
CCNL1-215ENST00000474539 MLLT1Q03111 559 aaPredicted RBP4.77□□□□□ -1.65
CCNL1-215ENST00000474539 NSUN2Q08J23 767 aaKnown RBP eCLIP4.77□□□□□ -1.65
CCNL1-215ENST00000474539 PDCLQ13371 301 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 GRB14Q14449 540 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 MORF4L2Q15014 288 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 MEA1Q16626 185 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 INSCQ1MX18 579 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 AASDHQ4L235 1098 aaPredicted RBP4.77□□□□□ -1.65
CCNL1-215ENST00000474539 SLC22A9Q8IVM8 553 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 CMTM5Q96DZ9 223 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 TRABDQ9H4I3 376 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 ATP13A1Q9HD20 1204 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 ABHD10Q9NUJ1 306 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 MARCH2Q9P0N8 246 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 RCOR3Q9P2K3 495 aaPredicted RBP4.77□□□□□ -1.65
CCNL1-215ENST00000474539 ADAMTS1Q9UHI8 967 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 MFHAS1Q9Y4C4 1052 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 LRRC53A6NM62 1247 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 UBXN8O00124 270 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 SNAP23O00161 211 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 VPS4BO75351 444 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 LTFP02788 710 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 CD63P08962 238 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 ARP10275 920 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 UCHL3P15374 230 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 CRHR2Q13324 411 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 NNTQ13423 1086 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 E2F4Q16254 413 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 TMEM119Q4V9L6 283 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 INTS6LQ5JSJ4 861 aaKnown RBP4.77□□□□□ -1.65
CCNL1-215ENST00000474539 FAM173BQ6P4H8 233 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 GALNT18Q6P9A2 607 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 PTF1AQ7RTS3 328 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 EID3Q8N140 333 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 CCDC185Q8N715 623 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 C3orf20Q8ND61 904 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 ARHGEF2Q92974 986 aaKnown RBP4.77□□□□□ -1.65
CCNL1-215ENST00000474539 DNAJC1Q96KC8 554 aaKnown RBP4.77□□□□□ -1.65
CCNL1-215ENST00000474539 CCDC138Q96M89 665 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 SERPINB12Q96P63 405 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms