RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-208ENST00000474319 ZNF333Q96JL9 665 aa11.14□□□□□ -0.63
LSS-208ENST00000474319 MINDY3Q9H8M7 445 aa11.14□□□□□ -0.63
LSS-208ENST00000474319 FIS1Q9Y3D6 152 aa11.14□□□□□ -0.63
LSS-208ENST00000474319 ZNFX1Q9P2E3 1918 aaKnown RBP11.14□□□□□ -0.63
LSS-208ENST00000474319 LAMA3Q16787 3333 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 SMAPO00193 183 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 PPP1R12AO14974 1030 aaPredicted RBP11.13□□□□□ -0.63
LSS-208ENST00000474319 ITM2AO43736 263 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 UBA1P22314 1058 aaKnown RBP11.13□□□□□ -0.63
LSS-208ENST00000474319 GBE1Q04446 702 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 SLC34A1Q06495 639 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 CCDC15Q0P6D6 951 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 LAMTOR4Q0VGL1 99 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 HSDL1Q3SXM5 330 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 NKD2Q969F2 451 aaPredicted RBP11.13□□□□□ -0.63
LSS-208ENST00000474319 MTBPQ96DY7 904 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 APOL2Q9BQE5 337 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 CFLARO15519 480 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 PDE1BQ01064 536 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 NIPA1Q7RTP0 329 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 CCNYQ8ND76 341 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 CLEC4CQ8WTT0 213 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 ANKRD36BP1Q96IX9 119 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 TIPINQ9BVW5 301 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 TRIM4Q9C037 500 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 ELOVL4Q9GZR5 314 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 RNPEPQ9H4A4 650 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 DDX56Q9NY93 547 aaKnown RBP11.13□□□□□ -0.63
LSS-208ENST00000474319 DNAJC16Q9Y2G8 782 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 DOCK5Q9H7D0 1870 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 C3orf70A6NLC5 250 aaPredicted RBP11.13□□□□□ -0.63
LSS-208ENST00000474319 SPECC1L-ADORA2AF8WAN1 911 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 MAGEB2O15479 319 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 CD1EP15812 388 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 NAMPTP43490 491 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 SNRPFP62306 86 aaKnown RBP11.13□□□□□ -0.63
LSS-208ENST00000474319 YWHAZP63104 245 aaKnown RBP11.13□□□□□ -0.63
LSS-208ENST00000474319 GRAMD1BQ3KR37 738 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 AP1ARQ63HQ0 302 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 CDCA2Q69YH5 1023 aaPredicted RBP11.13□□□□□ -0.63
LSS-208ENST00000474319 ACOT1Q86TX2 421 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 CRLF3Q8IUI8 442 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 SCUBE1Q8IWY4 988 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 AZIN2Q96A70 460 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 GPRASP2Q96D09 838 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 SPATA33Q96N06 139 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 MRPL4Q9BYD3 311 aaKnown RBP11.13□□□□□ -0.63
LSS-208ENST00000474319 PNPOQ9NVS9 261 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 CPSF2Q9P2I0 782 aaKnown RBP11.13□□□□□ -0.63
LSS-208ENST00000474319 RBPJLQ9UBG7 517 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 ZNF112Q9UJU3 913 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 LRRC42Q9Y546 428 aa11.13□□□□□ -0.63
LSS-208ENST00000474319 WDR27A2RRH5 827 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 BTBD19C9JJ37 291 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 ADCY3O60266 1144 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 KRT37O76014 449 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 METTL18O95568 372 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 LCP1P13796 627 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 TCN1P20061 433 aaPredicted RBP11.12□□□□□ -0.63
LSS-208ENST00000474319 ASPAP45381 313 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 MCL1Q07820 350 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 WASHC2DQ5SRD0 308 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 FAM219BQ5XKK7 198 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 LBX2Q6XYB7 198 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 BBS12Q6ZW61 710 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 XYLT1Q86Y38 959 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 BRSK2Q8IWQ3 736 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 PYROXD2Q8N2H3 581 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 TTC16Q8NEE8 873 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 PTCD3Q96EY7 689 aaKnown RBP11.12□□□□□ -0.63
LSS-208ENST00000474319 FAM49AQ9H0Q0 323 aaPredicted RBP11.12□□□□□ -0.63
LSS-208ENST00000474319 CXCL16Q9H2A7 254 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 IFT122Q9HBG6 1241 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 INPP5FQ9Y2H2 1132 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 MYOCOSA0A1B0GUC4 107 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 E9PBE3 544 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 PMM2O15305 246 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 KLHL41O60662 606 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 VTNP04004 478 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 ADORA2BP29275 332 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 YWHAEP62258 255 aaKnown RBP11.12□□□□□ -0.63
LSS-208ENST00000474319 MAP3K10Q02779 954 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 USP4Q13107 963 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 CCDC142Q17RM4 750 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 C6orf163Q5TEZ5 329 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 JADE1Q6IE81 842 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 TRNP1Q6NT89 227 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 CEP128Q6ZU80 1094 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 RAPH1Q70E73 1250 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 CMC1Q7Z7K0 106 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 ZNF276Q8N554 614 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 FAM172AQ8WUF8 416 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 FAM149B1Q96BN6 582 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 MARK4Q96L34 752 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 FGD4Q96M96 766 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 VCXQ9H320 206 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 DRG1Q9Y295 367 aaKnown RBP11.12□□□□□ -0.63
LSS-208ENST00000474319 MTO1Q9Y2Z2 717 aaKnown RBP11.12□□□□□ -0.63
LSS-208ENST00000474319 HES2Q9Y543 173 aa11.12□□□□□ -0.63
LSS-208ENST00000474319 LDHAP00338 332 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms