RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 MTIF2P46199 727 aaKnown RBP18.81■□□□□ 0.6
UPF3A-203ENST00000474056 RGS7P49802 495 aa18.81■□□□□ 0.6
UPF3A-203ENST00000474056 APBA1Q02410 837 aa18.81■□□□□ 0.6
UPF3A-203ENST00000474056 STILQ15468 1287 aa18.81■□□□□ 0.6
UPF3A-203ENST00000474056 C2orf27AQ580R0 203 aa18.81■□□□□ 0.6
UPF3A-203ENST00000474056 PMF1Q6P1K2 205 aa18.81■□□□□ 0.6
UPF3A-203ENST00000474056 GJB7Q6PEY0 223 aa18.81■□□□□ 0.6
UPF3A-203ENST00000474056 TRIM65Q6PJ69 517 aa18.81■□□□□ 0.6
UPF3A-203ENST00000474056 PRR23BQ6ZRT6 265 aa18.81■□□□□ 0.6
UPF3A-203ENST00000474056 TPGS1Q6ZTW0 290 aa18.81■□□□□ 0.6
UPF3A-203ENST00000474056 SYT13Q7L8C5 426 aa18.81■□□□□ 0.6
UPF3A-203ENST00000474056 SLC35F5Q8WV83 523 aa18.81■□□□□ 0.6
UPF3A-203ENST00000474056 THAP9Q9H5L6 903 aa18.81■□□□□ 0.6
UPF3A-203ENST00000474056 NCDNQ9UBB6 729 aa18.81■□□□□ 0.6
UPF3A-203ENST00000474056 CNTN6Q9UQ52 1028 aa18.81■□□□□ 0.6
UPF3A-203ENST00000474056 SPTBN4Q9H254 2564 aa18.81■□□□□ 0.6
UPF3A-203ENST00000474056 ZNF292O60281 2723 aa18.8■□□□□ 0.6
UPF3A-203ENST00000474056 YJEFN3A6XGL0 299 aa18.8■□□□□ 0.6
UPF3A-203ENST00000474056 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.8■□□□□ 0.6
UPF3A-203ENST00000474056 E7ENQ6 273 aa18.8■□□□□ 0.6
UPF3A-203ENST00000474056 NEDD8-MDP1E9PL57 170 aa18.8■□□□□ 0.6
UPF3A-203ENST00000474056 PIK3R2O00459 728 aa18.8■□□□□ 0.6
UPF3A-203ENST00000474056 TRIM24O15164 1050 aa18.8■□□□□ 0.6
UPF3A-203ENST00000474056 TULP3O75386 442 aa18.8■□□□□ 0.6
UPF3A-203ENST00000474056 GABBR2O75899 941 aa18.8■□□□□ 0.6
UPF3A-203ENST00000474056 KLKB1P03952 638 aa18.8■□□□□ 0.6
UPF3A-203ENST00000474056 CHRM1P11229 460 aaPredicted RBP18.8■□□□□ 0.6
UPF3A-203ENST00000474056 BTBD8Q5XKL5 378 aa18.8■□□□□ 0.6
UPF3A-203ENST00000474056 RSRC2Q7L4I2 434 aaKnown RBP18.8■□□□□ 0.6
UPF3A-203ENST00000474056 SIX6OS1Q8N1H7 587 aa18.8■□□□□ 0.6
UPF3A-203ENST00000474056 CCDC26Q8TAB7 109 aa18.8■□□□□ 0.6
UPF3A-203ENST00000474056 GPT2Q8TD30 523 aa18.8■□□□□ 0.6
UPF3A-203ENST00000474056 IPO9Q96P70 1041 aaKnown RBP18.8■□□□□ 0.6
UPF3A-203ENST00000474056 MARCH2Q9P0N8 246 aa18.8■□□□□ 0.6
UPF3A-203ENST00000474056 ABCA7Q8IZY2 2146 aa18.8■□□□□ 0.6
UPF3A-203ENST00000474056 A0A0A0MRY4 1105 aa18.79■□□□□ 0.6
UPF3A-203ENST00000474056 SLC12A8A0AV02 714 aa18.79■□□□□ 0.6
UPF3A-203ENST00000474056 KRT5P13647 590 aa18.79■□□□□ 0.6
UPF3A-203ENST00000474056 ERCC5P28715 1186 aaPredicted RBP18.79■□□□□ 0.6
UPF3A-203ENST00000474056 CORO1AP31146 461 aaKnown RBP18.79■□□□□ 0.6
UPF3A-203ENST00000474056 CNR2P34972 360 aa18.79■□□□□ 0.6
UPF3A-203ENST00000474056 TIE1P35590 1138 aa18.79■□□□□ 0.6
UPF3A-203ENST00000474056 GRIA2P42262 883 aa18.79■□□□□ 0.6
UPF3A-203ENST00000474056 DAOAP59103 153 aa18.79■□□□□ 0.6
UPF3A-203ENST00000474056 COG7P83436 770 aa18.79■□□□□ 0.6
UPF3A-203ENST00000474056 SIM2Q14190 667 aaPredicted RBP18.79■□□□□ 0.6
UPF3A-203ENST00000474056 EXOC3L4Q17RC7 722 aa18.79■□□□□ 0.6
UPF3A-203ENST00000474056 HSP90AA4PQ58FG1 418 aa18.79■□□□□ 0.6
UPF3A-203ENST00000474056 EMC10Q5UCC4 262 aa18.79■□□□□ 0.6
UPF3A-203ENST00000474056 GBP6Q6ZN66 633 aa18.79■□□□□ 0.6
UPF3A-203ENST00000474056 KIAA2013Q8IYS2 634 aa18.79■□□□□ 0.6
UPF3A-203ENST00000474056 SCML4Q8N228 414 aa18.79■□□□□ 0.6
UPF3A-203ENST00000474056 CCDC33Q8N5R6 958 aa18.79■□□□□ 0.6
UPF3A-203ENST00000474056 CAMKK1Q8N5S9 505 aa18.79■□□□□ 0.6
UPF3A-203ENST00000474056 CLEC4CQ8WTT0 213 aa18.79■□□□□ 0.6
UPF3A-203ENST00000474056 P2RY11Q96G91 374 aa18.79■□□□□ 0.6
UPF3A-203ENST00000474056 GBP4Q96PP9 640 aa18.79■□□□□ 0.6
UPF3A-203ENST00000474056 BBS2Q9BXC9 721 aa18.79■□□□□ 0.6
UPF3A-203ENST00000474056 ZDHHC4Q9NPG8 344 aa18.79■□□□□ 0.6
UPF3A-203ENST00000474056 CNGB3Q9NQW8 809 aa18.79■□□□□ 0.6
UPF3A-203ENST00000474056 MARK1Q9P0L2 795 aa18.79■□□□□ 0.6
UPF3A-203ENST00000474056 DACH1Q9UI36 760 aa18.79■□□□□ 0.6
UPF3A-203ENST00000474056 MMP17Q9ULZ9 603 aa18.79■□□□□ 0.6
UPF3A-203ENST00000474056 THADAQ6YHU6 1953 aa18.79■□□□□ 0.6
UPF3A-203ENST00000474056 CCDC163A0A0D9SF12 145 aa18.78■□□□□ 0.6
UPF3A-203ENST00000474056 GTPBP10A4D1E9 387 aaKnown RBP18.78■□□□□ 0.6
UPF3A-203ENST00000474056 TYRP14679 529 aa18.78■□□□□ 0.6
UPF3A-203ENST00000474056 KIR2DL1P43626 348 aaPredicted RBP18.78■□□□□ 0.6
UPF3A-203ENST00000474056 MFAP3P55082 362 aa18.78■□□□□ 0.6
UPF3A-203ENST00000474056 MRPS21P82921 87 aaKnown RBP18.78■□□□□ 0.6
UPF3A-203ENST00000474056 MAN2A1Q16706 1144 aa18.78■□□□□ 0.6
UPF3A-203ENST00000474056 ARHGAP44Q17R89 818 aa18.78■□□□□ 0.6
UPF3A-203ENST00000474056 BSPRYQ5W0U4 402 aa18.78■□□□□ 0.6
UPF3A-203ENST00000474056 TERB1Q8NA31 727 aa18.78■□□□□ 0.6
UPF3A-203ENST00000474056 EDEM1Q92611 657 aa18.78■□□□□ 0.6
UPF3A-203ENST00000474056 BHMTQ93088 406 aa18.78■□□□□ 0.6
UPF3A-203ENST00000474056 ACP6Q9NPH0 428 aa18.78■□□□□ 0.6
UPF3A-203ENST00000474056 OLA1Q9NTK5 396 aaKnown RBP18.78■□□□□ 0.6
UPF3A-203ENST00000474056 DNAJC17Q9NVM6 304 aaKnown RBP18.78■□□□□ 0.6
UPF3A-203ENST00000474056 PLK2Q9NYY3 685 aa18.78■□□□□ 0.6
UPF3A-203ENST00000474056 DEC1Q9P2X7 70 aa18.78■□□□□ 0.6
UPF3A-203ENST00000474056 APEX2Q9UBZ4 518 aa18.78■□□□□ 0.6
UPF3A-203ENST00000474056 SFMBT1Q9UHJ3 866 aa18.78■□□□□ 0.6
UPF3A-203ENST00000474056 AJAP1Q9UKB5 411 aaPredicted RBP18.78■□□□□ 0.6
UPF3A-203ENST00000474056 GMEB2Q9UKD1 530 aa18.78■□□□□ 0.6
UPF3A-203ENST00000474056 RAB23Q9ULC3 237 aa18.78■□□□□ 0.6
UPF3A-203ENST00000474056 STRIP2Q9ULQ0 834 aa18.78■□□□□ 0.6
UPF3A-203ENST00000474056 ZNF510Q9Y2H8 683 aa18.78■□□□□ 0.6
UPF3A-203ENST00000474056 FRYLO94915 3013 aa18.78■□□□□ 0.6
UPF3A-203ENST00000474056 NUP205Q92621 2012 aa18.78■□□□□ 0.6
UPF3A-203ENST00000474056 WDR87Q6ZQQ6 2873 aa18.77■□□□□ 0.6
UPF3A-203ENST00000474056 BECN2A8MW95 431 aa18.77■□□□□ 0.6
UPF3A-203ENST00000474056 CACNG3O60359 315 aa18.77■□□□□ 0.6
UPF3A-203ENST00000474056 KLF8O95600 359 aaPredicted RBP18.77■□□□□ 0.6
UPF3A-203ENST00000474056 HNRNPLP14866 589 aaKnown RBP eCLIP18.77■□□□□ 0.6
UPF3A-203ENST00000474056 PON1P27169 355 aa18.77■□□□□ 0.6
UPF3A-203ENST00000474056 GPD2P43304 727 aa18.77■□□□□ 0.6
UPF3A-203ENST00000474056 LAIR1Q6GTX8 287 aa18.77■□□□□ 0.6
UPF3A-203ENST00000474056 CEP68Q76N32 757 aa18.77■□□□□ 0.6
UPF3A-203ENST00000474056 ENOSF1Q7L5Y1 443 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms