RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 SHCBP1Q8NEM2 672 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 PPM1EQ8WY54 764 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 ALG3Q92685 438 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 SLCO2A1Q92959 643 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 C18orf8Q96DM3 657 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 SNF8Q96H20 258 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 FAXDC2Q96IV6 333 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 SPATA33Q96N06 139 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 ALPK1Q96QP1 1244 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 C11orf70Q9BRQ4 267 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 TRIM51Q9BSJ1 452 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 PI4K2AQ9BTU6 479 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 KRTAP17-1Q9BYP8 105 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 CELF4Q9BZC1 486 aaKnown RBP6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 EPN3Q9H201 632 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 LRRC19Q9H756 370 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 SYNCQ9H7C4 482 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 RPF1Q9H9Y2 349 aaKnown RBP6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 C19orf73Q9NVV2 129 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 DDX56Q9NY93 547 aaKnown RBP6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 WHRNQ9P202 907 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 POLR3KQ9Y2Y1 108 aaPredicted RBP6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 SNX24Q9Y343 169 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 RRP15Q9Y3B9 282 aaKnown RBP6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 ADGRA3Q8IWK6 1321 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 GOLGB1Q14789 3259 aaKnown RBP6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 MYH10P35580 1976 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 GOLGA6L7A0A1B0GV03 622 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 GSTTP1A0A1W2PQM5 241 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 E7EVH7 732 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 INO80B-WBP1J3KQ70 363 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 TJP3O95049 919 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 HTR3BO95264 441 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 AGTP01019 485 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 ESR1P03372 595 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 KRT1P04264 644 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 CYP1A1P04798 512 aaPredicted RBP6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 NUDT17P0C025 328 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 SRGAP2CP0DJJ0 459 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 ZBTB48P10074 688 aaPredicted RBP6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 PYGMP11217 842 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 UNGP13051 313 aaPredicted RBP6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 RARGP13631 454 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 ADCY8P40145 1251 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 CCT5P48643 541 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 PEX5P50542 639 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 TFAMQ00059 246 aaKnown RBP6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 CNTN2Q02246 1040 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 KRT17Q04695 432 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 LAMTOR4Q0VGL1 99 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 SNAPC2Q13487 334 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 PTK6Q13882 451 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 MRPL58Q14197 206 aaKnown RBP6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 PIGHQ14442 188 aaPredicted RBP6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 TARBP2Q15633 366 aaKnown RBP6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 ZNF568Q3ZCX4 644 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 ZNF667Q5HYK9 610 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 CELF3Q5SZQ8 465 aaKnown RBP6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 TREML2Q5T2D2 321 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 ATF7IP2Q5U623 682 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 LRRC38Q5VT99 294 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 CDCA2Q69YH5 1023 aaPredicted RBP6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 SRLQ86TD4 932 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 ERICH1Q86X53 443 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 DDX42Q86XP3 938 aaKnown RBP eCLIP6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 KATNAL2Q8IYT4 538 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 ANKS4BQ8N8V4 417 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 PRELID2Q8N945 189 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 RNF149Q8NC42 400 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 ZSWIM2Q8NEG5 633 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 ATL2Q8NHH9 583 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 EXD1Q8NHP7 514 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 OLIG1Q8TAK6 271 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 FEZF2Q8TBJ5 459 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 IPO4Q8TEX9 1081 aaKnown RBP6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 RNF141Q8WVD5 230 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 PRPF31Q8WWY3 499 aaKnown RBP6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 CPA5Q8WXQ8 436 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 DDX1Q92499 740 aaKnown RBP6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 KRT35Q92764 455 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 CD101Q93033 1021 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 ARL8AQ96BM9 186 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 ZBTB9Q96C00 473 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 SELENOSQ9BQE4 189 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 ADPGKQ9BRR6 497 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 FRMD8P1Q9BZ68 369 aaPredicted RBP6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 ROPN1BQ9BZX4 212 aaPredicted RBP6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 INO80BQ9C086 356 aaPredicted RBP6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 ASCC2Q9H1I8 757 aaPredicted RBP6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 DUSP15Q9H1R2 295 aaPredicted RBP6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 TRIT1Q9H3H1 467 aaKnown RBP6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 FAM124BQ9H5Z6 455 aaPredicted RBP6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 ROPN1Q9HAT0 212 aaPredicted RBP6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 PRMT7Q9NVM4 692 aaPredicted RBP6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 ERAP1Q9NZ08 941 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 RNF181Q9P0P0 153 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 WDR35Q9P2L0 1181 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 CNTN6Q9UQ52 1028 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 PTPN22Q9Y2R2 807 aa6.19□□□□□ -1.42
ATPAF1-204ENST00000474020 ATXN2Q99700 1313 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms