RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 SDR42E2A6NKP2 422 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 FAM159BA6NKW6 160 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 BTBD19C9JJ37 291 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 ZNF862O60290 1169 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 ONECUT3O60422 494 aaPredicted RBP6.34□□□□□ -1.39
HERC4-209ENST00000473533 SETSIPP0DME0 302 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 VDRP11473 427 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 ICAM3P32942 547 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 RFC1P35251 1148 aaPredicted RBP6.34□□□□□ -1.39
HERC4-209ENST00000473533 YWHAZP63104 245 aaKnown RBP6.34□□□□□ -1.39
HERC4-209ENST00000473533 OGDHQ02218 1023 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 TNFAIP2Q03169 654 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 MMEL1Q495T6 779 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 TBC1D10BQ4KMP7 808 aaPredicted RBP6.34□□□□□ -1.39
HERC4-209ENST00000473533 NCAPG2Q86XI2 1143 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 AGBL3Q8NEM8 1001 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 FAM81AQ8TBF8 368 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 DLG3Q92796 817 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 AZIN2Q96A70 460 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 PANX3Q96QZ0 392 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 ZNF670Q9BS34 389 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 TARS2Q9BW92 718 aaKnown RBP6.34□□□□□ -1.39
HERC4-209ENST00000473533 METTL5Q9NRN9 209 aaKnown RBP6.34□□□□□ -1.39
HERC4-209ENST00000473533 PTTG2Q9NZH5 202 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 SLC7A8Q9UHI5 535 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 PCDHA11Q9Y5I1 949 aa6.34□□□□□ -1.39
HERC4-209ENST00000473533 ZNF646O15015 1829 aaPredicted RBP6.34□□□□□ -1.4
HERC4-209ENST00000473533 TMEM150BA6NC51 233 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 HACD1B0YJ81 288 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 SPATA31C2B4DYI2 1134 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 DPYSL4O14531 572 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 CASQ2O14958 399 aaPredicted RBP6.33□□□□□ -1.4
HERC4-209ENST00000473533 B4GALT4O60513 344 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 TMCC1O94876 653 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 ENDOD1O94919 500 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 APOA4P06727 396 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 UBTFL6P0CB48 400 aaPredicted RBP6.33□□□□□ -1.4
HERC4-209ENST00000473533 MIPP30301 263 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 CHN2P52757 468 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 ALDH18A1P54886 795 aaKnown RBP6.33□□□□□ -1.4
HERC4-209ENST00000473533 GRM2Q14416 872 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 R3HDM1Q15032 1099 aaKnown RBP6.33□□□□□ -1.4
HERC4-209ENST00000473533 ANKRD20A4Q4UJ75 823 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 TEX44Q53QW1 395 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 ALYREFQ86V81 257 aaKnown RBP6.33□□□□□ -1.4
HERC4-209ENST00000473533 ZDHHC17Q8IUH5 632 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 HSPH1Q92598 858 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 RNF157Q96PX1 679 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 EBNA1BP2Q99848 306 aaKnown RBP6.33□□□□□ -1.4
HERC4-209ENST00000473533 POPDC2Q9HBU9 364 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 ALG13Q9NP73 1137 aaKnown RBP6.33□□□□□ -1.4
HERC4-209ENST00000473533 ETNK2Q9NVF9 386 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 FBXO40Q9UH90 709 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 RAB26Q9ULW5 256 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 MAFBQ9Y5Q3 323 aaPredicted RBP6.33□□□□□ -1.4
HERC4-209ENST00000473533 TMEM114B3SHH9 223 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 KCNN4O15554 427 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 AP1G2O75843 785 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 CALCAP01258 141 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 AMPD1P23109 780 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 SERPINB6P35237 376 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 GDF10P55107 478 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 BAATQ14032 418 aaPredicted RBP6.33□□□□□ -1.4
HERC4-209ENST00000473533 STXBP2Q15833 593 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 CNPY1Q3B7I2 92 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 XYLT1Q86Y38 959 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 DNERQ8NFT8 737 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 TRPC4APQ8TEL6 797 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 DGCR14Q96DF8 476 aaKnown RBP6.33□□□□□ -1.4
HERC4-209ENST00000473533 TSNARE1Q96NA8 513 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 SH2D3AQ9BRG2 576 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 ACAD9Q9H845 621 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 PCDHAC2Q9Y5I4 1007 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 COL11A2P13942 1736 aaPredicted RBP6.33□□□□□ -1.4
HERC4-209ENST00000473533 MYH9P35579 1960 aaKnown RBP6.33□□□□□ -1.4
HERC4-209ENST00000473533 CLRN2A0PK11 232 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 SLCO1B7G3V0H7 640 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 AP3B1O00203 1094 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 BANF1O75531 89 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 GCATO75600 419 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 ATG7O95352 703 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 CFHP08603 1231 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 THRAP10827 490 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 HADHAP40939 763 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 RPL5P46777 297 aaKnown RBP6.33□□□□□ -1.4
HERC4-209ENST00000473533 TUBP50607 506 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 LSAMPQ13449 338 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 PTPN20Q4JDL3 420 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 CYP4A22Q5TCH4 519 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 DCAF15Q66K64 600 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 TRMT1LQ7Z2T5 733 aaKnown RBP6.33□□□□□ -1.4
HERC4-209ENST00000473533 OR5B17Q8NGF7 314 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 B4GALNT2Q8NHY0 566 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 SLC26A7Q8TE54 656 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 IRGQQ8WZA9 623 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 HIC2Q96JB3 615 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 RTKNQ9BST9 563 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 HAUS8Q9BT25 410 aa6.33□□□□□ -1.4
HERC4-209ENST00000473533 MRPS26Q9BYN8 205 aaKnown RBP6.33□□□□□ -1.4
HERC4-209ENST00000473533 TIMMDC1Q9NPL8 285 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms