RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 CKMT1AP12532 417 aa7.12□□□□□ -1.27
SEC22A-204ENST00000473494 ZFXP17010 805 aaPredicted RBP7.12□□□□□ -1.27
SEC22A-204ENST00000473494 DRD1P21728 446 aa7.12□□□□□ -1.27
SEC22A-204ENST00000473494 CTGFP29279 349 aa7.12□□□□□ -1.27
SEC22A-204ENST00000473494 MCM5P33992 734 aa7.12□□□□□ -1.27
SEC22A-204ENST00000473494 ACTR2P61160 394 aa7.12□□□□□ -1.27
SEC22A-204ENST00000473494 CUL4BQ13620 913 aa7.12□□□□□ -1.27
SEC22A-204ENST00000473494 Q6ZNX1 250 aa7.12□□□□□ -1.27
SEC22A-204ENST00000473494 LRRC71Q8N4P6 559 aa7.12□□□□□ -1.27
SEC22A-204ENST00000473494 RP9Q8TA86 221 aaKnown RBP7.12□□□□□ -1.27
SEC22A-204ENST00000473494 CPT1BQ92523 772 aa7.12□□□□□ -1.27
SEC22A-204ENST00000473494 TRAPPC9Q96Q05 1148 aa7.12□□□□□ -1.27
SEC22A-204ENST00000473494 NDUFAF4Q9P032 175 aa7.12□□□□□ -1.27
SEC22A-204ENST00000473494 UBE2J1Q9Y385 318 aaPredicted RBP7.12□□□□□ -1.27
SEC22A-204ENST00000473494 LOC105369274A0A096LPK9 316 aa7.11□□□□□ -1.27
SEC22A-204ENST00000473494 LOC102723532A0A0G2JNH3 316 aa7.11□□□□□ -1.27
SEC22A-204ENST00000473494 PMPCBO75439 489 aa7.11□□□□□ -1.27
SEC22A-204ENST00000473494 WDHD1O75717 1129 aaPredicted RBP7.11□□□□□ -1.27
SEC22A-204ENST00000473494 URI1O94763 535 aaPredicted RBP7.11□□□□□ -1.27
SEC22A-204ENST00000473494 JUPP14923 745 aa7.11□□□□□ -1.27
SEC22A-204ENST00000473494 SERPINA4P29622 427 aa7.11□□□□□ -1.27
SEC22A-204ENST00000473494 GSTM5P46439 218 aa7.11□□□□□ -1.27
SEC22A-204ENST00000473494 SEC24CP53992 1094 aa7.11□□□□□ -1.27
SEC22A-204ENST00000473494 SUMO2P61956 95 aaKnown RBP7.11□□□□□ -1.27
SEC22A-204ENST00000473494 SF3A3Q12874 501 aaKnown RBP eCLIP7.11□□□□□ -1.27
SEC22A-204ENST00000473494 SMAD1Q15797 465 aaKnown RBP7.11□□□□□ -1.27
SEC22A-204ENST00000473494 FAM110CQ1W6H9 321 aa7.11□□□□□ -1.27
SEC22A-204ENST00000473494 ANKRD45Q5TZF3 282 aa7.11□□□□□ -1.27
SEC22A-204ENST00000473494 GRHL2Q6ISB3 625 aa7.11□□□□□ -1.27
SEC22A-204ENST00000473494 CCDC144NLQ6NUI1 221 aa7.11□□□□□ -1.27
SEC22A-204ENST00000473494 OR4N4Q8N0Y3 316 aa7.11□□□□□ -1.27
SEC22A-204ENST00000473494 TEX19Q8NA77 164 aa7.11□□□□□ -1.27
SEC22A-204ENST00000473494 XAGE5Q8WWM1 108 aa7.11□□□□□ -1.27
SEC22A-204ENST00000473494 LINC00476Q8WZB0 136 aa7.11□□□□□ -1.27
SEC22A-204ENST00000473494 COQ10AQ96MF6 247 aa7.11□□□□□ -1.27
SEC22A-204ENST00000473494 SYBUQ9NX95 663 aa7.11□□□□□ -1.27
SEC22A-204ENST00000473494 ZBTB1Q9Y2K1 713 aa7.11□□□□□ -1.27
SEC22A-204ENST00000473494 POLR2AP24928 1970 aaKnown RBP7.1□□□□□ -1.27
SEC22A-204ENST00000473494 SLC38A8A6NNN8 435 aa7.1□□□□□ -1.27
SEC22A-204ENST00000473494 KIF28PB7ZC32 967 aa7.1□□□□□ -1.27
SEC22A-204ENST00000473494 LARGE1O95461 756 aa7.1□□□□□ -1.27
SEC22A-204ENST00000473494 ADRA1DP25100 572 aa7.1□□□□□ -1.27
SEC22A-204ENST00000473494 YY1P25490 414 aa7.1□□□□□ -1.27
SEC22A-204ENST00000473494 E2F1Q01094 437 aa7.1□□□□□ -1.27
SEC22A-204ENST00000473494 RALBP1Q15311 655 aa7.1□□□□□ -1.27
SEC22A-204ENST00000473494 GALNTL6Q49A17 601 aa7.1□□□□□ -1.27
SEC22A-204ENST00000473494 JAKMIP3Q5VZ66 844 aa7.1□□□□□ -1.27
SEC22A-204ENST00000473494 DGAT2L7PQ6IED9 249 aa7.1□□□□□ -1.27
SEC22A-204ENST00000473494 Q6YL49 198 aa7.1□□□□□ -1.27
SEC22A-204ENST00000473494 PTCHD4Q6ZW05 846 aa7.1□□□□□ -1.27
SEC22A-204ENST00000473494 Q6ZWC4 215 aa7.1□□□□□ -1.27
SEC22A-204ENST00000473494 RRAGAQ7L523 313 aa7.1□□□□□ -1.27
SEC22A-204ENST00000473494 ZNF551Q7Z340 670 aaPredicted RBP7.1□□□□□ -1.27
SEC22A-204ENST00000473494 CPOQ8IVL8 374 aa7.1□□□□□ -1.27
SEC22A-204ENST00000473494 SLC22A17Q8WUG5 538 aa7.1□□□□□ -1.27
SEC22A-204ENST00000473494 C3orf49Q96BT1 292 aa7.1□□□□□ -1.27
SEC22A-204ENST00000473494 MCRS1Q96EZ8 462 aa7.1□□□□□ -1.27
SEC22A-204ENST00000473494 VPS50Q96JG6 964 aa7.1□□□□□ -1.27
SEC22A-204ENST00000473494 TAF1DQ9H5J8 278 aaPredicted RBP7.1□□□□□ -1.27
SEC22A-204ENST00000473494 FNDC1Q4ZHG4 1894 aaPredicted RBP7.09□□□□□ -1.27
SEC22A-204ENST00000473494 TMPRSS11DO60235 418 aa7.09□□□□□ -1.27
SEC22A-204ENST00000473494 TFRCP02786 760 aaKnown RBP7.09□□□□□ -1.27
SEC22A-204ENST00000473494 DLDP09622 509 aaKnown RBP7.09□□□□□ -1.27
SEC22A-204ENST00000473494 HKR1P10072 659 aa7.09□□□□□ -1.27
SEC22A-204ENST00000473494 ITPKBP27987 946 aa7.09□□□□□ -1.27
SEC22A-204ENST00000473494 LSM12Q3MHD2 195 aaKnown RBP7.09□□□□□ -1.27
SEC22A-204ENST00000473494 INTS11Q5TA45 600 aaKnown RBP7.09□□□□□ -1.27
SEC22A-204ENST00000473494 WDR53Q7Z5U6 358 aaPredicted RBP7.09□□□□□ -1.27
SEC22A-204ENST00000473494 ANKS1BQ7Z6G8 1248 aa7.09□□□□□ -1.27
SEC22A-204ENST00000473494 TMTC1Q8IUR5 882 aa7.09□□□□□ -1.27
SEC22A-204ENST00000473494 SH3RF3Q8TEJ3 882 aaPredicted RBP7.09□□□□□ -1.27
SEC22A-204ENST00000473494 AFG1LQ8WV93 481 aa7.09□□□□□ -1.27
SEC22A-204ENST00000473494 ASB12Q8WXK4 309 aa7.09□□□□□ -1.27
SEC22A-204ENST00000473494 TFAP2BQ92481 460 aa7.09□□□□□ -1.27
SEC22A-204ENST00000473494 PPM1MQ96MI6 270 aa7.09□□□□□ -1.27
SEC22A-204ENST00000473494 DPCDQ9BVM2 203 aaPredicted RBP7.09□□□□□ -1.27
SEC22A-204ENST00000473494 ARHGEF3Q9NR81 526 aa7.09□□□□□ -1.27
SEC22A-204ENST00000473494 REXO2Q9Y3B8 237 aaKnown RBP7.09□□□□□ -1.27
SEC22A-204ENST00000473494 FAM90A20PA6NIJ5 464 aa7.08□□□□□ -1.28
SEC22A-204ENST00000473494 EYA2O00167 538 aa7.08□□□□□ -1.28
SEC22A-204ENST00000473494 NR2F6P10588 404 aa7.08□□□□□ -1.28
SEC22A-204ENST00000473494 AARSP49588 968 aaKnown RBP eCLIP7.08□□□□□ -1.28
SEC22A-204ENST00000473494 TLE2Q04725 743 aa7.08□□□□□ -1.28
SEC22A-204ENST00000473494 PTPAQ15257 358 aa7.08□□□□□ -1.28
SEC22A-204ENST00000473494 P3H1Q32P28 736 aa7.08□□□□□ -1.28
SEC22A-204ENST00000473494 PLAC9Q5JTB6 97 aa7.08□□□□□ -1.28
SEC22A-204ENST00000473494 MTHFD1LQ6UB35 978 aa7.08□□□□□ -1.28
SEC22A-204ENST00000473494 PEG10Q86TG7 708 aaKnown RBP7.08□□□□□ -1.28
SEC22A-204ENST00000473494 P3H2Q8IVL5 708 aa7.08□□□□□ -1.28
SEC22A-204ENST00000473494 SLC44A3Q8N4M1 653 aa7.08□□□□□ -1.28
SEC22A-204ENST00000473494 PNPLA1Q8N8W4 532 aa7.08□□□□□ -1.28
SEC22A-204ENST00000473494 NAXEQ8NCW5 288 aa7.08□□□□□ -1.28
SEC22A-204ENST00000473494 SLC2A12Q8TD20 617 aa7.08□□□□□ -1.28
SEC22A-204ENST00000473494 HMGB4Q8WW32 186 aa7.08□□□□□ -1.28
SEC22A-204ENST00000473494 NPIPB3Q92617 1050 aa7.08□□□□□ -1.28
SEC22A-204ENST00000473494 EIF3CQ99613 913 aaKnown RBP7.08□□□□□ -1.28
SEC22A-204ENST00000473494 MECRQ9BV79 373 aa7.08□□□□□ -1.28
SEC22A-204ENST00000473494 FSD1LQ9BXM9 530 aa7.08□□□□□ -1.28
SEC22A-204ENST00000473494 ABHD16BQ9H3Z7 469 aa7.08□□□□□ -1.28
SEC22A-204ENST00000473494 RIC8AQ9NPQ8 531 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms