RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 MORC1Q86VD1 984 aa5.34□□□□□ -1.55
CNOT4-209ENST00000473470 SPICE1Q8N0Z3 855 aa5.34□□□□□ -1.55
CNOT4-209ENST00000473470 SEMA6DQ8NFY4 1073 aa5.34□□□□□ -1.55
CNOT4-209ENST00000473470 MORC4Q8TE76 937 aa5.34□□□□□ -1.55
CNOT4-209ENST00000473470 PHKBQ93100 1093 aa5.34□□□□□ -1.55
CNOT4-209ENST00000473470 TRIM5Q9C035 493 aa5.34□□□□□ -1.55
CNOT4-209ENST00000473470 INO80BQ9C086 356 aaPredicted RBP5.34□□□□□ -1.55
CNOT4-209ENST00000473470 SNX15Q9NRS6 342 aa5.34□□□□□ -1.55
CNOT4-209ENST00000473470 FLRT1Q9NZU1 646 aa5.34□□□□□ -1.55
CNOT4-209ENST00000473470 SH3BP4Q9P0V3 963 aa5.34□□□□□ -1.55
CNOT4-209ENST00000473470 COL20A1Q9P218 1284 aa5.34□□□□□ -1.55
CNOT4-209ENST00000473470 ZNF212Q9UDV6 495 aa5.34□□□□□ -1.55
CNOT4-209ENST00000473470 SERGEFQ9UGK8 458 aa5.34□□□□□ -1.55
CNOT4-209ENST00000473470 RALGAPBQ86X10 1494 aa5.33□□□□□ -1.56
CNOT4-209ENST00000473470 MANSC4A6NHS7 340 aaPredicted RBP5.33□□□□□ -1.56
CNOT4-209ENST00000473470 ZNF213O14771 459 aa5.33□□□□□ -1.56
CNOT4-209ENST00000473470 LDHAP00338 332 aaKnown RBP5.33□□□□□ -1.56
CNOT4-209ENST00000473470 CDK4P11802 303 aa5.33□□□□□ -1.56
CNOT4-209ENST00000473470 MYCLP12524 364 aaPredicted RBP5.33□□□□□ -1.56
CNOT4-209ENST00000473470 TPH1P17752 444 aa5.33□□□□□ -1.56
CNOT4-209ENST00000473470 TIAL1Q01085 375 aaKnown RBP eCLIP5.33□□□□□ -1.56
CNOT4-209ENST00000473470 GPR162Q16538 588 aa5.33□□□□□ -1.56
CNOT4-209ENST00000473470 CERKLQ49MI3 558 aaPredicted RBP5.33□□□□□ -1.56
CNOT4-209ENST00000473470 C3orf38Q5JPI3 329 aa5.33□□□□□ -1.56
CNOT4-209ENST00000473470 COLEC12Q5KU26 742 aa5.33□□□□□ -1.56
CNOT4-209ENST00000473470 KIRREL2Q6UWL6 708 aa5.33□□□□□ -1.56
CNOT4-209ENST00000473470 KRT27Q7Z3Y8 459 aa5.33□□□□□ -1.56
CNOT4-209ENST00000473470 SIRT6Q8N6T7 355 aa5.33□□□□□ -1.56
CNOT4-209ENST00000473470 NGDNQ8NEJ9 315 aaKnown RBP5.33□□□□□ -1.56
CNOT4-209ENST00000473470 DNAJB14Q8TBM8 379 aa5.33□□□□□ -1.56
CNOT4-209ENST00000473470 TMEM171Q8WVE6 324 aa5.33□□□□□ -1.56
CNOT4-209ENST00000473470 PPP2R3CQ969Q6 453 aa5.33□□□□□ -1.56
CNOT4-209ENST00000473470 REPS1Q96D71 796 aa5.33□□□□□ -1.56
CNOT4-209ENST00000473470 TNIP3Q96KP6 325 aa5.33□□□□□ -1.56
CNOT4-209ENST00000473470 APOL5Q9BWW9 433 aa5.33□□□□□ -1.56
CNOT4-209ENST00000473470 BRIP1Q9BX63 1249 aa5.33□□□□□ -1.56
CNOT4-209ENST00000473470 CHMP4AQ9BY43 222 aa5.33□□□□□ -1.56
CNOT4-209ENST00000473470 NLRC4Q9NPP4 1024 aa5.33□□□□□ -1.56
CNOT4-209ENST00000473470 TAGLN3Q9UI15 199 aa5.33□□□□□ -1.56
CNOT4-209ENST00000473470 MID2Q9UJV3 735 aa5.33□□□□□ -1.56
CNOT4-209ENST00000473470 USP22Q9UPT9 525 aa5.33□□□□□ -1.56
CNOT4-209ENST00000473470 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.32□□□□□ -1.56
CNOT4-209ENST00000473470 CDC42BPBQ9Y5S2 1711 aa5.32□□□□□ -1.56
CNOT4-209ENST00000473470 SPAG9O60271 1321 aaKnown RBP5.32□□□□□ -1.56
CNOT4-209ENST00000473470 RASA4BC9J798 803 aa5.32□□□□□ -1.56
CNOT4-209ENST00000473470 UBE2Q2LH0YL09 131 aa5.32□□□□□ -1.56
CNOT4-209ENST00000473470 H7C4K7 107 aa5.32□□□□□ -1.56
CNOT4-209ENST00000473470 RASA4O43374 803 aa5.32□□□□□ -1.56
CNOT4-209ENST00000473470 MYL3P08590 195 aa5.32□□□□□ -1.56
CNOT4-209ENST00000473470 IL1R1P14778 569 aa5.32□□□□□ -1.56
CNOT4-209ENST00000473470 ZNF37AP17032 561 aaPredicted RBP5.32□□□□□ -1.56
CNOT4-209ENST00000473470 CERS1P27544 350 aa5.32□□□□□ -1.56
CNOT4-209ENST00000473470 IL1R2P27930 398 aa5.32□□□□□ -1.56
CNOT4-209ENST00000473470 CASP5P51878 434 aa5.32□□□□□ -1.56
CNOT4-209ENST00000473470 E2F1Q01094 437 aa5.32□□□□□ -1.56
CNOT4-209ENST00000473470 SP2Q02086 613 aa5.32□□□□□ -1.56
CNOT4-209ENST00000473470 ST3GAL2Q16842 350 aa5.32□□□□□ -1.56
CNOT4-209ENST00000473470 C4orf46Q504U0 113 aa5.32□□□□□ -1.56
CNOT4-209ENST00000473470 SLC9A4Q6AI14 798 aa5.32□□□□□ -1.56
CNOT4-209ENST00000473470 DPP9Q86TI2 863 aa5.32□□□□□ -1.56
CNOT4-209ENST00000473470 SESTD1Q86VW0 696 aa5.32□□□□□ -1.56
CNOT4-209ENST00000473470 SFTPA1Q8IWL2 248 aa5.32□□□□□ -1.56
CNOT4-209ENST00000473470 PARD3BQ8TEW8 1205 aa5.32□□□□□ -1.56
CNOT4-209ENST00000473470 IQCDQ96DY2 449 aa5.32□□□□□ -1.56
CNOT4-209ENST00000473470 SNX18Q96RF0 628 aa5.32□□□□□ -1.56
CNOT4-209ENST00000473470 MYD88Q99836 296 aa5.32□□□□□ -1.56
CNOT4-209ENST00000473470 C17orf80Q9BSJ5 609 aa5.32□□□□□ -1.56
CNOT4-209ENST00000473470 SYT17Q9BSW7 474 aa5.32□□□□□ -1.56
CNOT4-209ENST00000473470 GBA2Q9HCG7 927 aaPredicted RBP5.32□□□□□ -1.56
CNOT4-209ENST00000473470 TFCP2L1Q9NZI6 479 aa5.32□□□□□ -1.56
CNOT4-209ENST00000473470 ITGB1BP2Q9UKP3 347 aa5.32□□□□□ -1.56
CNOT4-209ENST00000473470 AMFRQ9UKV5 643 aa5.32□□□□□ -1.56
CNOT4-209ENST00000473470 DRG1Q9Y295 367 aaKnown RBP5.32□□□□□ -1.56
CNOT4-209ENST00000473470 SNX13Q9Y5W8 968 aa5.32□□□□□ -1.56
CNOT4-209ENST00000473470 PCSK5Q92824 1860 aa5.31□□□□□ -1.56
CNOT4-209ENST00000473470 SAMD9LQ8IVG5 1584 aa5.31□□□□□ -1.56
CNOT4-209ENST00000473470 RHPN2P1A8MT19 583 aa5.31□□□□□ -1.56
CNOT4-209ENST00000473470 THAP12O43422 761 aa5.31□□□□□ -1.56
CNOT4-209ENST00000473470 TMPRSS11DO60235 418 aa5.31□□□□□ -1.56
CNOT4-209ENST00000473470 ANXA2P07355 339 aaKnown RBP5.31□□□□□ -1.56
CNOT4-209ENST00000473470 CHRM5P08912 532 aaPredicted RBP5.31□□□□□ -1.56
CNOT4-209ENST00000473470 CD19P15391 556 aa5.31□□□□□ -1.56
CNOT4-209ENST00000473470 SERPINB3P29508 390 aa5.31□□□□□ -1.56
CNOT4-209ENST00000473470 GKP32189 559 aa5.31□□□□□ -1.56
CNOT4-209ENST00000473470 PIK3CBP42338 1070 aa5.31□□□□□ -1.56
CNOT4-209ENST00000473470 PGDP52209 483 aa5.31□□□□□ -1.56
CNOT4-209ENST00000473470 CYP4F2P78329 520 aa5.31□□□□□ -1.56
CNOT4-209ENST00000473470 HOXA4Q00056 320 aaPredicted RBP5.31□□□□□ -1.56
CNOT4-209ENST00000473470 GRM1Q13255 1194 aa5.31□□□□□ -1.56
CNOT4-209ENST00000473470 DAG1Q14118 895 aa5.31□□□□□ -1.56
CNOT4-209ENST00000473470 CYP1B1Q16678 543 aa5.31□□□□□ -1.56
CNOT4-209ENST00000473470 ZNF750Q32MQ0 723 aa5.31□□□□□ -1.56
CNOT4-209ENST00000473470 GORABQ5T7V8 394 aa5.31□□□□□ -1.56
CNOT4-209ENST00000473470 PTCHD4Q6ZW05 846 aa5.31□□□□□ -1.56
CNOT4-209ENST00000473470 SRLQ86TD4 932 aa5.31□□□□□ -1.56
CNOT4-209ENST00000473470 SMC5Q8IY18 1101 aa5.31□□□□□ -1.56
CNOT4-209ENST00000473470 SRRM1Q8IYB3 904 aaKnown RBP5.31□□□□□ -1.56
CNOT4-209ENST00000473470 FAM186BQ8IYM0 893 aa5.31□□□□□ -1.56
CNOT4-209ENST00000473470 LRRC59Q96AG4 307 aaKnown RBP5.31□□□□□ -1.56
CNOT4-209ENST00000473470 THAP7Q9BT49 309 aaPredicted RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms