RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 A0A1W2PQD8 194 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 TTC24A2A3L6 582 aaPredicted RBP7.33□□□□□ -1.24
CKS1B-205ENST00000473344 HOXC11O43248 304 aaPredicted RBP7.33□□□□□ -1.24
CKS1B-205ENST00000473344 COCHO43405 550 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 PHACTR2O75167 634 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 TULP3O75386 442 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 TACC1O75410 805 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 CST3P01034 146 aaPredicted RBP7.33□□□□□ -1.24
CKS1B-205ENST00000473344 PTMAP06454 111 aaKnown RBP7.33□□□□□ -1.24
CKS1B-205ENST00000473344 IRF1P10914 325 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 GNSP15586 552 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 GABRG2P18507 467 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 PDCP20941 246 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 WASP42768 502 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 CACNA2D1P54289 1103 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 GOLGA8FQ08AF8 430 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 GOLGA8DPQ0D2H9 430 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 SNRNP35Q16560 246 aaKnown RBP7.33□□□□□ -1.24
CKS1B-205ENST00000473344 PLEKHG6Q3KR16 790 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 PEAR1Q5VY43 1037 aaPredicted RBP7.33□□□□□ -1.24
CKS1B-205ENST00000473344 LIMS2Q7Z4I7 341 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 PIP4P1Q86T03 277 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 CHCHD4Q8N4Q1 142 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 TERB1Q8NA31 727 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 B3GALNT2Q8NCR0 500 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 SCFD1Q8WVM8 642 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 CCDC127Q96BQ5 260 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 HSPA12BQ96MM6 686 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 CLIC6Q96NY7 704 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 XPO6Q96QU8 1125 aaKnown RBP7.33□□□□□ -1.24
CKS1B-205ENST00000473344 ZNF518BQ9C0D4 1074 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 DPEP3Q9H4B8 488 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 FAM124BQ9H5Z6 455 aaPredicted RBP7.33□□□□□ -1.24
CKS1B-205ENST00000473344 SPHK2Q9NRA0 654 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 HSPBP1Q9NZL4 362 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 OGFRQ9NZT2 677 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 NXF1Q9UBU9 619 aaKnown RBP7.33□□□□□ -1.24
CKS1B-205ENST00000473344 SUSD2Q9UGT4 822 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 CHORDC1Q9UHD1 332 aaPredicted RBP7.33□□□□□ -1.24
CKS1B-205ENST00000473344 FBXO2Q9UK22 296 aaPredicted RBP7.33□□□□□ -1.24
CKS1B-205ENST00000473344 SCN1AP35498 2009 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 ITPR1Q14643 2758 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 CELSR3Q9NYQ7 3312 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 EML5Q05BV3 1969 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 IGHV1OR15-9A0A0B4J2B8 117 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 FRMD3A2A2Y4 597 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 NEDD8-MDP1E9PL57 170 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 CLDN5O00501 218 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 WFS1O76024 890 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 FAM163BP0C2L3 166 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 TRIM21P19474 475 aaKnown RBP7.32□□□□□ -1.24
CKS1B-205ENST00000473344 TUBP50607 506 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 SLC5A3P53794 718 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 AMPD3Q01432 767 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 SLC14A1Q13336 389 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 TRIP6Q15654 476 aaKnown RBP7.32□□□□□ -1.24
CKS1B-205ENST00000473344 WDR45BQ5MNZ6 344 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 GRAMD4Q6IC98 578 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 BRICD5Q6PL45 260 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 ZNF771Q7L3S4 317 aaPredicted RBP7.32□□□□□ -1.24
CKS1B-205ENST00000473344 PROSER1Q86XN7 944 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 TMEM25Q86YD3 366 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 BBS7Q8IWZ6 715 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 ETFBKMTQ8IXQ9 262 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 PDILTQ8N807 584 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 TRIML1Q8N9V2 468 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 FOXJ1Q92949 421 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 TNIP3Q96KP6 325 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 TIGD1Q96MW7 591 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 KCNK16Q96T55 309 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 BBS2Q9BXC9 721 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 B3GNT5Q9BYG0 378 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 FGFBP2Q9BYJ0 223 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 CCSER2Q9H7U1 834 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 CAPN10Q9HC96 672 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 DMAP1Q9NPF5 467 aaPredicted RBP7.32□□□□□ -1.24
CKS1B-205ENST00000473344 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.32□□□□□ -1.24
CKS1B-205ENST00000473344 DNAJC17Q9NVM6 304 aaKnown RBP7.32□□□□□ -1.24
CKS1B-205ENST00000473344 LSM7Q9UK45 103 aaKnown RBP7.32□□□□□ -1.24
CKS1B-205ENST00000473344 CYP8B1Q9UNU6 501 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 STARD13Q9Y3M8 1113 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 OBSL1O75147 1896 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 ANK1P16157 1881 aa7.32□□□□□ -1.24
CKS1B-205ENST00000473344 SMG1Q96Q15 3661 aaKnown RBP7.31□□□□□ -1.24
CKS1B-205ENST00000473344 A0A1W2PQF6 199 aa7.31□□□□□ -1.24
CKS1B-205ENST00000473344 FAM221BA6H8Z2 402 aa7.31□□□□□ -1.24
CKS1B-205ENST00000473344 GOLGA6L6A8MZA4 724 aa7.31□□□□□ -1.24
CKS1B-205ENST00000473344 EIF3DO15371 548 aaKnown RBP eCLIP7.31□□□□□ -1.24
CKS1B-205ENST00000473344 SH3BP5O60239 455 aa7.31□□□□□ -1.24
CKS1B-205ENST00000473344 TLR5O60602 858 aa7.31□□□□□ -1.24
CKS1B-205ENST00000473344 CD59P13987 128 aa7.31□□□□□ -1.24
CKS1B-205ENST00000473344 TYRP14679 529 aa7.31□□□□□ -1.24
CKS1B-205ENST00000473344 NDUFV2P19404 249 aa7.31□□□□□ -1.24
CKS1B-205ENST00000473344 ATICP31939 592 aa7.31□□□□□ -1.24
CKS1B-205ENST00000473344 CYP2J2P51589 502 aa7.31□□□□□ -1.24
CKS1B-205ENST00000473344 BIRC3Q13489 604 aa7.31□□□□□ -1.24
CKS1B-205ENST00000473344 STARD3Q14849 445 aa7.31□□□□□ -1.24
CKS1B-205ENST00000473344 PSMD6Q15008 389 aa7.31□□□□□ -1.24
CKS1B-205ENST00000473344 SNX30Q5VWJ9 437 aa7.31□□□□□ -1.24
CKS1B-205ENST00000473344 EGFLAMQ63HQ2 1017 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms