RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 TFAMQ00059 246 aaKnown RBP6.78□□□□□ -1.32
HDAC1-205ENST00000472928 TUSC3Q13454 348 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 MTF1Q14872 753 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 SURF1Q15526 300 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 NAB2Q15742 525 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 ASIC2Q16515 512 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 MEA1Q16626 185 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 ZACNQ401N2 412 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 TDRD12Q587J7 1177 aaKnown RBP6.78□□□□□ -1.32
HDAC1-205ENST00000472928 SFMBT2Q5VUG0 894 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 PSAPL1Q6NUJ1 521 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 DPY19L2P1Q6NXN4 242 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 VITQ6UXI7 678 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 SV2AQ7L0J3 742 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 CEP57Q86XR8 500 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 TREML1Q86YW5 311 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 ARHGEF19Q8IW93 802 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 FBXL13Q8NEE6 735 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 OR5B17Q8NGF7 314 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 IPO4Q8TEX9 1081 aaKnown RBP6.78□□□□□ -1.32
HDAC1-205ENST00000472928 SEMA4DQ92854 862 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 GATA6Q92908 595 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 ANKRD36BP1Q96IX9 119 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 NT5C1BQ96P26 610 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 DESI2Q9BSY9 194 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 TRMT61BQ9BVS5 477 aaKnown RBP6.78□□□□□ -1.32
HDAC1-205ENST00000472928 EDEM3Q9BZQ6 932 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 CXCL16Q9H2A7 254 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 ARRDC1-AS1Q9H2J1 176 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 SMOC1Q9H4F8 434 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 ZNF334Q9HCZ1 680 aaPredicted RBP6.78□□□□□ -1.32
HDAC1-205ENST00000472928 TRPV5Q9NQA5 729 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 IGSF5Q9NSI5 407 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 MTRRQ9UBK8 725 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 DAAM1Q9Y4D1 1078 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 TICRRQ7Z2Z1 1910 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 CFAP46Q8IYW2 2715 aa6.78□□□□□ -1.32
HDAC1-205ENST00000472928 ARHGEF37A1IGU5 675 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 WDR27A2RRH5 827 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 LACTBL1A8MY62 500 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 F8VZ95 297 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 PTGESO14684 152 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 AXIN1O15169 862 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 MEFVO15553 781 aaPredicted RBP6.77□□□□□ -1.33
HDAC1-205ENST00000472928 ZNF500O60304 480 aaPredicted RBP6.77□□□□□ -1.33
HDAC1-205ENST00000472928 MOSPD3O75425 235 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 RECQL4O94761 1208 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 VNN1O95497 513 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 PDGFAP04085 211 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 PNMA6AP0CW24 399 aaPredicted RBP6.77□□□□□ -1.33
HDAC1-205ENST00000472928 FGFR3P22607 806 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 GDI1P31150 447 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 VIPR2P41587 438 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 AP3M2P53677 418 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 YARSP54577 528 aaKnown RBP6.77□□□□□ -1.33
HDAC1-205ENST00000472928 JAM2P57087 298 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 NOP14P78316 857 aaKnown RBP6.77□□□□□ -1.33
HDAC1-205ENST00000472928 ARID5AQ03989 594 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 RING1Q06587 406 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 POU4F2Q12837 409 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 TMEM132DQ14C87 1099 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 ARHGAP44Q17R89 818 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 C6orf118Q5T5N4 469 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 JADE1Q6IE81 842 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 TCEAL6Q6IPX3 200 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 MRPL14Q6P1L8 145 aaKnown RBP6.77□□□□□ -1.33
HDAC1-205ENST00000472928 WDR59Q6PJI9 974 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 CD300LGQ6UXG3 332 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 RAD9BQ6WBX8 426 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 SCARA5Q6ZMJ2 495 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 TOGARAM2Q6ZUX3 1019 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 CEP68Q76N32 757 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 RTL10Q7L3V2 364 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 WDR5BQ86VZ2 330 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 TMTC1Q8IUR5 882 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 PPM1KQ8N3J5 372 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 C12orf50Q8NA57 414 aaPredicted RBP6.77□□□□□ -1.33
HDAC1-205ENST00000472928 LMO3Q8TAP4 145 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 KIAA1524Q8TCG1 905 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 EDEM1Q92611 657 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 IRF7Q92985 503 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 TCEAL3Q969E4 200 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 ELMO3Q96BJ8 720 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 ALKBH8Q96BT7 664 aaKnown RBP6.77□□□□□ -1.33
HDAC1-205ENST00000472928 RSPRY1Q96DX4 576 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 LOXL4Q96JB6 756 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 ZSWIM3Q96MP5 696 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 ACAP3Q96P50 834 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 PI4K2AQ9BTU6 479 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 IMPG2Q9BZV3 1241 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 NUCKS1Q9H1E3 243 aaKnown RBP6.77□□□□□ -1.33
HDAC1-205ENST00000472928 ZFP14Q9HCL3 533 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 SNTG2Q9NY99 539 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 FBXL5Q9UKA1 691 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 DNAJC12Q9UKB3 198 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 MYO6Q9UM54 1294 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 COQ4Q9Y3A0 265 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 GPC6Q9Y625 555 aaPredicted RBP6.77□□□□□ -1.33
HDAC1-205ENST00000472928 PTPRDP23468 1912 aa6.77□□□□□ -1.33
HDAC1-205ENST00000472928 ABCA7Q8IZY2 2146 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms