RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 SLC8B1Q6J4K2 584 aa15.21■□□□□ 0.03
HIF3A-206ENST00000472815 TTC27Q6P3X3 843 aa15.21■□□□□ 0.03
HIF3A-206ENST00000472815 CYP4V2Q6ZWL3 525 aaPredicted RBP15.21■□□□□ 0.03
HIF3A-206ENST00000472815 ZNF365Q70YC5 407 aa15.21■□□□□ 0.03
HIF3A-206ENST00000472815 GSTA5Q7RTV2 222 aa15.21■□□□□ 0.03
HIF3A-206ENST00000472815 TMEM173Q86WV6 379 aaPredicted RBP15.21■□□□□ 0.03
HIF3A-206ENST00000472815 RNF168Q8IYW5 571 aaPredicted RBP15.21■□□□□ 0.03
HIF3A-206ENST00000472815 SLC39A11Q8N1S5 342 aa15.21■□□□□ 0.03
HIF3A-206ENST00000472815 COLGALT1Q8NBJ5 622 aa15.21■□□□□ 0.03
HIF3A-206ENST00000472815 FAM71BQ8TC56 605 aa15.21■□□□□ 0.03
HIF3A-206ENST00000472815 NDRG1Q92597 394 aaKnown RBP15.21■□□□□ 0.03
HIF3A-206ENST00000472815 NTAN1Q96AB6 310 aa15.21■□□□□ 0.03
HIF3A-206ENST00000472815 SPATA17Q96L03 361 aa15.21■□□□□ 0.03
HIF3A-206ENST00000472815 B3GALT6Q96L58 329 aa15.21■□□□□ 0.03
HIF3A-206ENST00000472815 PGLYRP2Q96PD5 576 aa15.21■□□□□ 0.03
HIF3A-206ENST00000472815 MTIF3Q9H2K0 278 aaKnown RBP15.21■□□□□ 0.03
HIF3A-206ENST00000472815 DHX35Q9H5Z1 703 aaKnown RBP15.21■□□□□ 0.03
HIF3A-206ENST00000472815 FAM204AQ9H8W3 233 aa15.21■□□□□ 0.03
HIF3A-206ENST00000472815 NAALADL1Q9UQQ1 740 aa15.21■□□□□ 0.03
HIF3A-206ENST00000472815 SCML2Q9UQR0 700 aa15.21■□□□□ 0.03
HIF3A-206ENST00000472815 DRG1Q9Y295 367 aaKnown RBP15.21■□□□□ 0.03
HIF3A-206ENST00000472815 CDY1Q9Y6F8 540 aa15.21■□□□□ 0.03
HIF3A-206ENST00000472815 COL4A6Q14031 1691 aa15.21■□□□□ 0.03
HIF3A-206ENST00000472815 LIASO43766 372 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 EFEMP2O95967 443 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 URODP06132 367 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 TGM2P21980 687 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 PTGIRP43119 386 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 TNNT3P45378 269 aaPredicted RBP15.2■□□□□ 0.02
HIF3A-206ENST00000472815 TUFMP49411 452 aaKnown RBP15.2■□□□□ 0.02
HIF3A-206ENST00000472815 GLUD2P49448 558 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 PSEN1P49768 467 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 ARSEP51690 589 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 KRT17Q04695 432 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 MGAT5BQ3V5L5 792 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 SYPL2Q5VXT5 272 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 DENND5BQ6ZUT9 1274 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 HFE2Q6ZVN8 426 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 BNIPLQ7Z465 357 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 MON1AQ86VX9 555 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 FAM131BQ86XD5 332 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 CCDC89Q8N998 374 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 RNF139Q8WU17 664 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 BCL7CQ8WUZ0 217 aaPredicted RBP15.2■□□□□ 0.02
HIF3A-206ENST00000472815 CASKIN2Q8WXE0 1202 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 ATG4AQ8WYN0 398 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 RNF157Q96PX1 679 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 HERPUD2Q9BSE4 406 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 ZBED2Q9BTP6 218 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 HERC2P3Q9BVR0 1158 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 PCDH18Q9HCL0 1135 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 DDIT4Q9NX09 232 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 HSFX1Q9UBD0 423 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 ZNF148Q9UQR1 794 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 SSX2IPQ9Y2D8 614 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 PLXNA3P51805 1871 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 SYNJ2BP-COX16A0A087WUM0 186 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 ESYT3A0FGR9 886 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 APOL1O14791 398 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 MCF2LO15068 1137 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 CARSP49589 748 aaKnown RBP15.2■□□□□ 0.02
HIF3A-206ENST00000472815 RGS19P49795 217 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 RABGGTBP53611 331 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 VCPP55072 806 aaKnown RBP15.2■□□□□ 0.02
HIF3A-206ENST00000472815 DYNLT1P63172 113 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 IFRD2Q12894 506 aaPredicted RBP15.2■□□□□ 0.02
HIF3A-206ENST00000472815 CALCOCO2Q13137 446 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 PPP6R3Q5H9R7 873 aaPredicted RBP15.2■□□□□ 0.02
HIF3A-206ENST00000472815 TPGS2Q68CL5 300 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 DUPD1Q68J44 220 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 DDX53Q86TM3 631 aaKnown RBP15.2■□□□□ 0.02
HIF3A-206ENST00000472815 GPR65Q8IYL9 337 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 FIBCD1Q8N539 461 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 ATAD1Q8NBU5 361 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 BBOF1Q8ND07 529 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 SCAMP5Q8TAC9 235 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 AENQ8WTP8 325 aaKnown RBP15.2■□□□□ 0.02
HIF3A-206ENST00000472815 P3H4Q92791 437 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 SEPT5Q99719 369 aaPredicted RBP15.2■□□□□ 0.02
HIF3A-206ENST00000472815 TRIM51Q9BSJ1 452 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 PLEKHA4Q9H4M7 779 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.2■□□□□ 0.02
HIF3A-206ENST00000472815 COX16Q9P0S2 106 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 FZD10Q9ULW2 581 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 NFU1Q9UMS0 254 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 R3HDM2Q9Y2K5 976 aaKnown RBP15.2■□□□□ 0.02
HIF3A-206ENST00000472815 INSL6Q9Y581 213 aa15.2■□□□□ 0.02
HIF3A-206ENST00000472815 MRPL42Q9Y6G3 142 aaKnown RBP15.2■□□□□ 0.02
HIF3A-206ENST00000472815 ZSCAN5CA6NGD5 496 aaPredicted RBP15.19■□□□□ 0.02
HIF3A-206ENST00000472815 BHMG1C9JSJ3 638 aaPredicted RBP15.19■□□□□ 0.02
HIF3A-206ENST00000472815 H3BRJ5 948 aa15.19■□□□□ 0.02
HIF3A-206ENST00000472815 TNRC18O15417 2968 aaPredicted RBP15.19■□□□□ 0.02
HIF3A-206ENST00000472815 SEC31AO94979 1220 aaKnown RBP15.19■□□□□ 0.02
HIF3A-206ENST00000472815 GJB5O95377 273 aa15.19■□□□□ 0.02
HIF3A-206ENST00000472815 FYNP06241 537 aa15.19■□□□□ 0.02
HIF3A-206ENST00000472815 ITGAVP06756 1048 aa15.19■□□□□ 0.02
HIF3A-206ENST00000472815 CD48P09326 243 aa15.19■□□□□ 0.02
HIF3A-206ENST00000472815 HAPLN1P10915 354 aaPredicted RBP15.19■□□□□ 0.02
HIF3A-206ENST00000472815 TFE3P19532 575 aaPredicted RBP15.19■□□□□ 0.02
HIF3A-206ENST00000472815 YWHAQP27348 245 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms