RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 TANGO2Q6ICL3 276 aa5.59□□□□□ -1.51
PRPF40A-208ENST00000472760 MTHFD1LQ6UB35 978 aa5.59□□□□□ -1.51
PRPF40A-208ENST00000472760 RFX8Q6ZV50 586 aa5.59□□□□□ -1.51
PRPF40A-208ENST00000472760 PTCHD4Q6ZW05 846 aa5.59□□□□□ -1.51
PRPF40A-208ENST00000472760 SLC44A2Q8IWA5 706 aaPredicted RBP5.59□□□□□ -1.51
PRPF40A-208ENST00000472760 OR1N1Q8NGS0 311 aa5.59□□□□□ -1.51
PRPF40A-208ENST00000472760 STT3BQ8TCJ2 826 aa5.59□□□□□ -1.51
PRPF40A-208ENST00000472760 OTUD7AQ8TE49 926 aaPredicted RBP5.59□□□□□ -1.51
PRPF40A-208ENST00000472760 RSC1A1Q92681 617 aa5.59□□□□□ -1.51
PRPF40A-208ENST00000472760 CTHRC1Q96CG8 243 aa5.59□□□□□ -1.51
PRPF40A-208ENST00000472760 WDYHV1Q96HA8 205 aa5.59□□□□□ -1.51
PRPF40A-208ENST00000472760 PDLIM2Q96JY6 352 aa5.59□□□□□ -1.51
PRPF40A-208ENST00000472760 TOR3AQ9H497 397 aa5.59□□□□□ -1.51
PRPF40A-208ENST00000472760 FSCN3Q9NQT6 498 aa5.59□□□□□ -1.51
PRPF40A-208ENST00000472760 SNX15Q9NRS6 342 aa5.59□□□□□ -1.51
PRPF40A-208ENST00000472760 LPAR3Q9UBY5 353 aa5.59□□□□□ -1.51
PRPF40A-208ENST00000472760 HMX3A6NHT5 357 aa5.58□□□□□ -1.52
PRPF40A-208ENST00000472760 H0YIZ8 118 aa5.58□□□□□ -1.52
PRPF40A-208ENST00000472760 GCOM1H8Y6P7 765 aaPredicted RBP5.58□□□□□ -1.52
PRPF40A-208ENST00000472760 IPO5O00410 1097 aaKnown RBP5.58□□□□□ -1.52
PRPF40A-208ENST00000472760 TMPRSS11DO60235 418 aa5.58□□□□□ -1.52
PRPF40A-208ENST00000472760 CBFA2T3O75081 653 aa5.58□□□□□ -1.52
PRPF40A-208ENST00000472760 TJP3O95049 919 aa5.58□□□□□ -1.52
PRPF40A-208ENST00000472760 ZNF37AP17032 561 aaPredicted RBP5.58□□□□□ -1.52
PRPF40A-208ENST00000472760 ADRA1DP25100 572 aa5.58□□□□□ -1.52
PRPF40A-208ENST00000472760 CCT8P50990 548 aa5.58□□□□□ -1.52
PRPF40A-208ENST00000472760 SEMA3BQ13214 749 aa5.58□□□□□ -1.52
PRPF40A-208ENST00000472760 AARS2Q5JTZ9 985 aaKnown RBP5.58□□□□□ -1.52
PRPF40A-208ENST00000472760 GRHL2Q6ISB3 625 aa5.58□□□□□ -1.52
PRPF40A-208ENST00000472760 LIN54Q6MZP7 749 aa5.58□□□□□ -1.52
PRPF40A-208ENST00000472760 KRT27Q7Z3Y8 459 aa5.58□□□□□ -1.52
PRPF40A-208ENST00000472760 TTPALQ9BTX7 342 aa5.58□□□□□ -1.52
PRPF40A-208ENST00000472760 BRD8Q9H0E9 1235 aa5.58□□□□□ -1.52
PRPF40A-208ENST00000472760 PABPC3Q9H361 631 aaKnown RBP5.58□□□□□ -1.52
PRPF40A-208ENST00000472760 MLXIPQ9HAP2 919 aa5.58□□□□□ -1.52
PRPF40A-208ENST00000472760 FOXJ2Q9P0K8 574 aa5.58□□□□□ -1.52
PRPF40A-208ENST00000472760 PACSIN3Q9UKS6 424 aa5.58□□□□□ -1.52
PRPF40A-208ENST00000472760 ADAMTS5Q9UNA0 930 aa5.58□□□□□ -1.52
PRPF40A-208ENST00000472760 IRAK2O43187 625 aa5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 DHHO43323 396 aa5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 PDE8BO95263 885 aa5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 FGAP02671 866 aa5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 GCP02774 474 aa5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 ELFN1P0C7U0 828 aa5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 MYCLP12524 364 aaPredicted RBP5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 HSD3B1P14060 373 aa5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 CXCR5P32302 372 aa5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 MCM5P33992 734 aa5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 ARL4CP56559 192 aa5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 PPFIA1Q13136 1202 aa5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 KCNJ12Q14500 433 aa5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 TAF5Q15542 800 aa5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 ERCC6LQ2NKX8 1250 aa5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 BTBD16Q32M84 506 aa5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 AASDHQ4L235 1098 aaPredicted RBP5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 CCDC144NLQ6NUI1 221 aa5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 Q6ZPA2 131 aa5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 PIK3AP1Q6ZUJ8 805 aa5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 GRASPQ7Z6J2 395 aaPredicted RBP5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 Q8N1X5 172 aa5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 CLASRPQ8N2M8 674 aaKnown RBP5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 SCAMP5Q8TAC9 235 aa5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 OVCA2Q8WZ82 227 aa5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 LENG8Q96PV6 779 aaPredicted RBP5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 FSD1LQ9BXM9 530 aa5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 SAYSD1Q9NPB0 183 aa5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 PRDM8Q9NQV8 689 aa5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 ITM2CQ9NQX7 267 aa5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 ASAP1Q9ULH1 1129 aa5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 NFU1Q9UMS0 254 aa5.57□□□□□ -1.52
PRPF40A-208ENST00000472760 EFCAB8A8MWE9 144 aa5.56□□□□□ -1.52
PRPF40A-208ENST00000472760 FOXN1O15353 648 aa5.56□□□□□ -1.52
PRPF40A-208ENST00000472760 CTIFO43310 598 aaKnown RBP5.56□□□□□ -1.52
PRPF40A-208ENST00000472760 CA12O43570 354 aa5.56□□□□□ -1.52
PRPF40A-208ENST00000472760 PPP6R2O75170 966 aa5.56□□□□□ -1.52
PRPF40A-208ENST00000472760 RHOBTB3O94955 611 aa5.56□□□□□ -1.52
PRPF40A-208ENST00000472760 CER1O95813 267 aa5.56□□□□□ -1.52
PRPF40A-208ENST00000472760 MMP8P22894 467 aa5.56□□□□□ -1.52
PRPF40A-208ENST00000472760 RARRES1P49788 294 aa5.56□□□□□ -1.52
PRPF40A-208ENST00000472760 SIM1P81133 766 aaPredicted RBP5.56□□□□□ -1.52
PRPF40A-208ENST00000472760 TXNL4AP83876 142 aaKnown RBP5.56□□□□□ -1.52
PRPF40A-208ENST00000472760 DEUP1Q05D60 604 aa5.56□□□□□ -1.52
PRPF40A-208ENST00000472760 RPS6KA2Q15349 733 aa5.56□□□□□ -1.52
PRPF40A-208ENST00000472760 ZNF569Q5MCW4 686 aa5.56□□□□□ -1.52
PRPF40A-208ENST00000472760 ANKRD45Q5TZF3 282 aa5.56□□□□□ -1.52
PRPF40A-208ENST00000472760 MSANTD2Q6P1R3 559 aa5.56□□□□□ -1.52
PRPF40A-208ENST00000472760 NFRKBQ6P4R8 1299 aa5.56□□□□□ -1.52
PRPF40A-208ENST00000472760 DBX2Q6ZNG2 339 aa5.56□□□□□ -1.52
PRPF40A-208ENST00000472760 RAB11FIP2Q7L804 512 aa5.56□□□□□ -1.52
PRPF40A-208ENST00000472760 ZNF804AQ7Z570 1209 aa5.56□□□□□ -1.52
PRPF40A-208ENST00000472760 TRABD2AQ86V40 505 aa5.56□□□□□ -1.52
PRPF40A-208ENST00000472760 RASAL3Q86YV0 1011 aa5.56□□□□□ -1.52
PRPF40A-208ENST00000472760 ANKRD18AQ8IVF6 992 aa5.56□□□□□ -1.52
PRPF40A-208ENST00000472760 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.56□□□□□ -1.52
PRPF40A-208ENST00000472760 PNPLA1Q8N8W4 532 aa5.56□□□□□ -1.52
PRPF40A-208ENST00000472760 SLC22A17Q8WUG5 538 aa5.56□□□□□ -1.52
PRPF40A-208ENST00000472760 TRAPPC9Q96Q05 1148 aa5.56□□□□□ -1.52
PRPF40A-208ENST00000472760 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.56□□□□□ -1.52
PRPF40A-208ENST00000472760 TAF1DQ9H5J8 278 aaPredicted RBP5.56□□□□□ -1.52
PRPF40A-208ENST00000472760 USP29Q9HBJ7 922 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms