RNA–Protein interactions for RNA: ENST00000472577.1

PKD1-208, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 1,140 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-208ENST00000472577 SCUBE3Q8IX30 993 aa18.04■□□□□ 0.48
PKD1-208ENST00000472577 CELF5Q8N6W0 485 aaKnown RBP18.04■□□□□ 0.48
PKD1-208ENST00000472577 TMEM35BQ8NCS4 154 aa18.04■□□□□ 0.48
PKD1-208ENST00000472577 OLIG1Q8TAK6 271 aa18.04■□□□□ 0.48
PKD1-208ENST00000472577 RUBCNQ92622 972 aa18.04■□□□□ 0.48
PKD1-208ENST00000472577 IQCDQ96DY2 449 aa18.04■□□□□ 0.48
PKD1-208ENST00000472577 SHDQ96IW2 340 aa18.04■□□□□ 0.48
PKD1-208ENST00000472577 PPP1R13BQ96KQ4 1090 aa18.04■□□□□ 0.48
PKD1-208ENST00000472577 PCDHB18PQ96TA0 734 aa18.04■□□□□ 0.48
PKD1-208ENST00000472577 LTB4R2Q9NPC1 389 aa18.04■□□□□ 0.48
PKD1-208ENST00000472577 SPATA6Q9NWH7 488 aaPredicted RBP18.04■□□□□ 0.48
PKD1-208ENST00000472577 OBP2AQ9NY56 170 aa18.04■□□□□ 0.48
PKD1-208ENST00000472577 CLIC5Q9NZA1 410 aa18.04■□□□□ 0.48
PKD1-208ENST00000472577 AIPL1Q9NZN9 384 aa18.04■□□□□ 0.48
PKD1-208ENST00000472577 ARHGAP26Q9UNA1 814 aa18.04■□□□□ 0.48
PKD1-208ENST00000472577 COL4A2P08572 1712 aa18.03■□□□□ 0.48
PKD1-208ENST00000472577 NCOR2Q9Y618 2525 aa18.03■□□□□ 0.48
PKD1-208ENST00000472577 SHISA7A6NL88 538 aa18.03■□□□□ 0.48
PKD1-208ENST00000472577 DPYSL4O14531 572 aa18.03■□□□□ 0.48
PKD1-208ENST00000472577 FBXO21O94952 628 aa18.03■□□□□ 0.48
PKD1-208ENST00000472577 LSM8O95777 96 aaKnown RBP18.03■□□□□ 0.48
PKD1-208ENST00000472577 ERBB2P04626 1255 aa18.03■□□□□ 0.48
PKD1-208ENST00000472577 CYP1A1P04798 512 aaPredicted RBP18.03■□□□□ 0.48
PKD1-208ENST00000472577 CCDC172P0C7W6 258 aa18.03■□□□□ 0.48
PKD1-208ENST00000472577 MBL2P11226 248 aaPredicted RBP18.03■□□□□ 0.48
PKD1-208ENST00000472577 TARSP26639 723 aaKnown RBP18.03■□□□□ 0.48
PKD1-208ENST00000472577 CASP14P31944 242 aa18.03■□□□□ 0.48
PKD1-208ENST00000472577 ZBED6P86452 979 aa18.03■□□□□ 0.48
PKD1-208ENST00000472577 PRKCQQ04759 706 aa18.03■□□□□ 0.48
PKD1-208ENST00000472577 NAA35Q5VZE5 725 aa18.03■□□□□ 0.48
PKD1-208ENST00000472577 BSPRYQ5W0U4 402 aa18.03■□□□□ 0.48
PKD1-208ENST00000472577 MFSD6LQ8IWD5 586 aa18.03■□□□□ 0.48
PKD1-208ENST00000472577 ARHGAP18Q8N392 663 aa18.03■□□□□ 0.48
PKD1-208ENST00000472577 IRGQQ8WZA9 623 aa18.03■□□□□ 0.48
PKD1-208ENST00000472577 E2F7Q96AV8 911 aa18.03■□□□□ 0.48
PKD1-208ENST00000472577 NOX5Q96PH1 765 aa18.03■□□□□ 0.48
PKD1-208ENST00000472577 AGPAT1Q99943 283 aa18.03■□□□□ 0.48
PKD1-208ENST00000472577 SYT11Q9BT88 431 aa18.03■□□□□ 0.48
PKD1-208ENST00000472577 KIF9Q9HAQ2 790 aa18.03■□□□□ 0.48
PKD1-208ENST00000472577 SMPD4Q9NXE4 827 aa18.03■□□□□ 0.48
PKD1-208ENST00000472577 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.03■□□□□ 0.48
PKD1-208ENST00000472577 CPQQ9Y646 472 aa18.03■□□□□ 0.48
PKD1-208ENST00000472577 FAM170BA6NMN3 283 aa18.02■□□□□ 0.48
PKD1-208ENST00000472577 MDM4O15151 490 aa18.02■□□□□ 0.48
PKD1-208ENST00000472577 RALAP11233 206 aa18.02■□□□□ 0.48
PKD1-208ENST00000472577 PSMC3P17980 439 aa18.02■□□□□ 0.48
PKD1-208ENST00000472577 PRKCIP41743 596 aa18.02■□□□□ 0.48
PKD1-208ENST00000472577 USP4Q13107 963 aa18.02■□□□□ 0.48
PKD1-208ENST00000472577 ZNF77Q15935 545 aa18.02■□□□□ 0.48
PKD1-208ENST00000472577 TPRG1Q6ZUI0 275 aa18.02■□□□□ 0.48
PKD1-208ENST00000472577 DGLUCYQ7Z3D6 616 aa18.02■□□□□ 0.48
PKD1-208ENST00000472577 FMNL3Q8IVF7 1028 aa18.02■□□□□ 0.48
PKD1-208ENST00000472577 ZNF276Q8N554 614 aa18.02■□□□□ 0.48
PKD1-208ENST00000472577 BPIFB1Q8TDL5 484 aa18.02■□□□□ 0.48
PKD1-208ENST00000472577 SH3RF2Q8TEC5 729 aa18.02■□□□□ 0.48
PKD1-208ENST00000472577 DEPDC1BQ8WUY9 529 aa18.02■□□□□ 0.48
PKD1-208ENST00000472577 CPA5Q8WXQ8 436 aa18.02■□□□□ 0.48
PKD1-208ENST00000472577 PIWIL1Q96J94 861 aaKnown RBP18.02■□□□□ 0.48
PKD1-208ENST00000472577 ZFRQ96KR1 1074 aaKnown RBP18.02■□□□□ 0.48
PKD1-208ENST00000472577 LUC7L2Q9Y383 392 aaKnown RBP18.02■□□□□ 0.48
PKD1-208ENST00000472577 KIF26AQ9ULI4 1882 aaPredicted RBP18.01■□□□□ 0.47
PKD1-208ENST00000472577 LEFTY2O00292 366 aa18.01■□□□□ 0.47
PKD1-208ENST00000472577 LAMTOR5O43504 91 aa18.01■□□□□ 0.47
PKD1-208ENST00000472577 SKILP12757 684 aa18.01■□□□□ 0.47
PKD1-208ENST00000472577 UNGP13051 313 aaPredicted RBP18.01■□□□□ 0.47
PKD1-208ENST00000472577 ATP5C1P36542 298 aaKnown RBP18.01■□□□□ 0.47
PKD1-208ENST00000472577 ZNF75DP51815 510 aa18.01■□□□□ 0.47
PKD1-208ENST00000472577 FCHO2Q0JRZ9 810 aa18.01■□□□□ 0.47
PKD1-208ENST00000472577 C10orf120Q5SQS8 335 aa18.01■□□□□ 0.47
PKD1-208ENST00000472577 BTBD8Q5XKL5 378 aa18.01■□□□□ 0.47
PKD1-208ENST00000472577 KLHDC10Q6PID8 442 aa18.01■□□□□ 0.47
PKD1-208ENST00000472577 TRIM72Q6ZMU5 477 aa18.01■□□□□ 0.47
PKD1-208ENST00000472577 FAM183BPQ6ZVS7 135 aa18.01■□□□□ 0.47
PKD1-208ENST00000472577 ZNF397Q8NF99 534 aaPredicted RBP18.01■□□□□ 0.47
PKD1-208ENST00000472577 IPO4Q8TEX9 1081 aaKnown RBP18.01■□□□□ 0.47
PKD1-208ENST00000472577 EDEM1Q92611 657 aa18.01■□□□□ 0.47
PKD1-208ENST00000472577 TRMT61BQ9BVS5 477 aaKnown RBP18.01■□□□□ 0.47
PKD1-208ENST00000472577 NACA2Q9H009 215 aa18.01■□□□□ 0.47
PKD1-208ENST00000472577 NUCKS1Q9H1E3 243 aaKnown RBP18.01■□□□□ 0.47
PKD1-208ENST00000472577 HAUS4Q9H6D7 363 aa18.01■□□□□ 0.47
PKD1-208ENST00000472577 HEBP1Q9NRV9 189 aa18.01■□□□□ 0.47
PKD1-208ENST00000472577 LTFP02788 710 aa18■□□□□ 0.47
PKD1-208ENST00000472577 FYNP06241 537 aa18■□□□□ 0.47
PKD1-208ENST00000472577 TCF3P15923 654 aa18■□□□□ 0.47
PKD1-208ENST00000472577 GDI1P31150 447 aa18■□□□□ 0.47
PKD1-208ENST00000472577 GABRB2P47870 512 aa18■□□□□ 0.47
PKD1-208ENST00000472577 PFKPQ01813 784 aa18■□□□□ 0.47
PKD1-208ENST00000472577 CSTF1Q05048 431 aaKnown RBP18■□□□□ 0.47
PKD1-208ENST00000472577 KLHL30Q0D2K2 578 aa18■□□□□ 0.47
PKD1-208ENST00000472577 TRIM14Q14142 442 aa18■□□□□ 0.47
PKD1-208ENST00000472577 CLEC16AQ2KHT3 1053 aa18■□□□□ 0.47
PKD1-208ENST00000472577 C2CD6Q53TS8 623 aa18■□□□□ 0.47
PKD1-208ENST00000472577 HGSNATQ68CP4 663 aa18■□□□□ 0.47
PKD1-208ENST00000472577 TSSK4Q6SA08 328 aa18■□□□□ 0.47
PKD1-208ENST00000472577 ZNF571Q7Z3V5 609 aaPredicted RBP18■□□□□ 0.47
PKD1-208ENST00000472577 ERICH1Q86X53 443 aa18■□□□□ 0.47
PKD1-208ENST00000472577 TTC16Q8NEE8 873 aa18■□□□□ 0.47
PKD1-208ENST00000472577 SLC30A5Q8TAD4 765 aa18■□□□□ 0.47
PKD1-208ENST00000472577 SYN2Q92777 582 aaPredicted RBP18■□□□□ 0.47
PKD1-208ENST00000472577 WBP2Q969T9 261 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms