RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 FAM92AA1XBS5 289 aa20.11■□□□□ 0.81
SORT1-203ENST00000471996 PRPF6O94906 941 aaKnown RBP20.11■□□□□ 0.81
SORT1-203ENST00000471996 IGLV3-19P01714 112 aa20.11■□□□□ 0.81
SORT1-203ENST00000471996 CSNK1EP49674 416 aaKnown RBP20.11■□□□□ 0.81
SORT1-203ENST00000471996 DHRS13Q6UX07 377 aa20.11■□□□□ 0.81
SORT1-203ENST00000471996 TMPRSS6Q8IU80 811 aa20.11■□□□□ 0.81
SORT1-203ENST00000471996 ZNF843Q8N446 348 aa20.11■□□□□ 0.81
SORT1-203ENST00000471996 DNAJC19Q96DA6 116 aa20.11■□□□□ 0.81
SORT1-203ENST00000471996 SIPA1Q96FS4 1042 aa20.11■□□□□ 0.81
SORT1-203ENST00000471996 NUP58Q9BVL2 599 aa20.11■□□□□ 0.81
SORT1-203ENST00000471996 KLF16Q9BXK1 252 aaPredicted RBP20.11■□□□□ 0.81
SORT1-203ENST00000471996 OLFML3Q9NRN5 406 aa20.11■□□□□ 0.81
SORT1-203ENST00000471996 COMMD8Q9NX08 183 aa20.11■□□□□ 0.81
SORT1-203ENST00000471996 ZNF233A6NK53 670 aa20.1■□□□□ 0.81
SORT1-203ENST00000471996 A8MXQ7 604 aa20.1■□□□□ 0.81
SORT1-203ENST00000471996 PLK4O00444 970 aa20.1■□□□□ 0.81
SORT1-203ENST00000471996 KIAA0391O15091 583 aaKnown RBP20.1■□□□□ 0.81
SORT1-203ENST00000471996 NPC1O15118 1278 aa20.1■□□□□ 0.81
SORT1-203ENST00000471996 TLR5O60602 858 aa20.1■□□□□ 0.81
SORT1-203ENST00000471996 CST3P01034 146 aaPredicted RBP20.1■□□□□ 0.81
SORT1-203ENST00000471996 EIF2S3P41091 472 aaKnown RBP20.1■□□□□ 0.81
SORT1-203ENST00000471996 GRK6P43250 576 aa20.1■□□□□ 0.81
SORT1-203ENST00000471996 AFF3P51826 1226 aaKnown RBP20.1■□□□□ 0.81
SORT1-203ENST00000471996 ALCAMQ13740 583 aa20.1■□□□□ 0.81
SORT1-203ENST00000471996 KIF19Q2TAC6 998 aa20.1■□□□□ 0.81
SORT1-203ENST00000471996 CCDC157Q569K6 752 aa20.1■□□□□ 0.81
SORT1-203ENST00000471996 TRAPPC11Q7Z392 1133 aa20.1■□□□□ 0.81
SORT1-203ENST00000471996 TMPRSS12Q86WS5 348 aa20.1■□□□□ 0.81
SORT1-203ENST00000471996 CBWD2Q8IUF1 395 aa20.1■□□□□ 0.81
SORT1-203ENST00000471996 WDR49Q8IV35 697 aa20.1■□□□□ 0.81
SORT1-203ENST00000471996 ENGASEQ8NFI3 743 aa20.1■□□□□ 0.81
SORT1-203ENST00000471996 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.1■□□□□ 0.813e-51■■■■■ 245.9
SORT1-203ENST00000471996 FBXO10Q9UK96 956 aa20.1■□□□□ 0.81
SORT1-203ENST00000471996 TBX18O95935 607 aa20.09■□□□□ 0.81
SORT1-203ENST00000471996 IL12RB1P42701 662 aa20.09■□□□□ 0.81
SORT1-203ENST00000471996 PGFP49763 221 aa20.09■□□□□ 0.81
SORT1-203ENST00000471996 TNNC1P63316 161 aa20.09■□□□□ 0.81
SORT1-203ENST00000471996 ENPP2Q13822 863 aa20.09■□□□□ 0.81
SORT1-203ENST00000471996 WDR72Q3MJ13 1102 aa20.09■□□□□ 0.81
SORT1-203ENST00000471996 LRRC69Q6ZNQ3 347 aa20.09■□□□□ 0.81
SORT1-203ENST00000471996 PRCCQ92733 491 aaPredicted RBP20.09■□□□□ 0.81
SORT1-203ENST00000471996 NXPE2Q96DL1 559 aa20.09■□□□□ 0.81
SORT1-203ENST00000471996 FGFBP2Q9BYJ0 223 aa20.09■□□□□ 0.81
SORT1-203ENST00000471996 PCED1AQ9H1Q7 454 aa20.09■□□□□ 0.81
SORT1-203ENST00000471996 THAP10Q9P2Z0 257 aaPredicted RBP20.09■□□□□ 0.81
SORT1-203ENST00000471996 LSM7Q9UK45 103 aaKnown RBP20.09■□□□□ 0.81
SORT1-203ENST00000471996 SNX11Q9Y5W9 270 aa20.09■□□□□ 0.81
SORT1-203ENST00000471996 GOLGA4Q13439 2230 aaKnown RBP20.08■□□□□ 0.81
SORT1-203ENST00000471996 ATP8B3O60423 1300 aa20.08■□□□□ 0.81
SORT1-203ENST00000471996 CYSRT1A8MQ03 144 aa20.08■□□□□ 0.81
SORT1-203ENST00000471996 PCDHGA12O60330 932 aa20.08■□□□□ 0.81
SORT1-203ENST00000471996 EIF5BO60841 1220 aaKnown RBP20.08■□□□□ 0.81
SORT1-203ENST00000471996 BMP15O95972 392 aa20.08■□□□□ 0.81
SORT1-203ENST00000471996 ACO1P21399 889 aaKnown RBP20.08■□□□□ 0.81
SORT1-203ENST00000471996 PAQR9Q6ZVX9 377 aa20.08■□□□□ 0.81
SORT1-203ENST00000471996 FAM35AQ86V20 835 aa20.08■□□□□ 0.81
SORT1-203ENST00000471996 DMAP1Q9NPF5 467 aaPredicted RBP20.08■□□□□ 0.81
SORT1-203ENST00000471996 PLK2Q9NYY3 685 aa20.08■□□□□ 0.81
SORT1-203ENST00000471996 STK17AQ9UEE5 414 aa20.08■□□□□ 0.81
SORT1-203ENST00000471996 SLC27A6Q9Y2P4 619 aa20.08■□□□□ 0.81
SORT1-203ENST00000471996 SLCO1B1Q9Y6L6 691 aa20.08■□□□□ 0.81
SORT1-203ENST00000471996 MAST4O15021 2626 aa20.08■□□□□ 0.8
SORT1-203ENST00000471996 TLX3O43711 291 aaPredicted RBP20.07■□□□□ 0.8
SORT1-203ENST00000471996 SYNCRIPO60506 623 aaKnown RBP20.07■□□□□ 0.8
SORT1-203ENST00000471996 ACADMP11310 421 aa20.07■□□□□ 0.8
SORT1-203ENST00000471996 GOLGA8FQ08AF8 430 aa20.07■□□□□ 0.8
SORT1-203ENST00000471996 GOLGA8DPQ0D2H9 430 aa20.07■□□□□ 0.8
SORT1-203ENST00000471996 SF3A1Q15459 793 aaKnown RBP20.07■□□□□ 0.8
SORT1-203ENST00000471996 BHMTQ93088 406 aa20.07■□□□□ 0.8
SORT1-203ENST00000471996 IGSF8Q969P0 613 aa20.07■□□□□ 0.8
SORT1-203ENST00000471996 EPSTI1Q96J88 318 aa20.07■□□□□ 0.8
SORT1-203ENST00000471996 FCRL3Q96P31 734 aaPredicted RBP20.07■□□□□ 0.8
SORT1-203ENST00000471996 OSGEPQ9NPF4 335 aa20.07■□□□□ 0.8
SORT1-203ENST00000471996 ANKRD6Q9Y2G4 727 aa20.07■□□□□ 0.8
SORT1-203ENST00000471996 H3BQV1 296 aa20.06■□□□□ 0.8
SORT1-203ENST00000471996 CAPN9O14815 690 aa20.06■□□□□ 0.8
SORT1-203ENST00000471996 ATP5C1P36542 298 aaKnown RBP20.06■□□□□ 0.8
SORT1-203ENST00000471996 CCT8P50990 548 aa20.06■□□□□ 0.8
SORT1-203ENST00000471996 COPAP53621 1224 aa20.06■□□□□ 0.8
SORT1-203ENST00000471996 TEAD4Q15561 434 aa20.06■□□□□ 0.8
SORT1-203ENST00000471996 C6orf118Q5T5N4 469 aa20.06■□□□□ 0.8
SORT1-203ENST00000471996 USP49Q70CQ1 688 aa20.06■□□□□ 0.8
SORT1-203ENST00000471996 SV2BQ7L1I2 683 aa20.06■□□□□ 0.8
SORT1-203ENST00000471996 SNX19Q92543 992 aa20.06■□□□□ 0.8
SORT1-203ENST00000471996 P2RY11Q96G91 374 aa20.06■□□□□ 0.8
SORT1-203ENST00000471996 SMARCD1Q96GM5 515 aa20.06■□□□□ 0.8
SORT1-203ENST00000471996 MED10Q9BTT4 135 aa20.06■□□□□ 0.8
SORT1-203ENST00000471996 TLR8Q9NR97 1041 aaKnown RBP20.06■□□□□ 0.8
SORT1-203ENST00000471996 SHROOM3Q8TF72 1996 aa20.06■□□□□ 0.8
SORT1-203ENST00000471996 FRMD3A2A2Y4 597 aa20.05■□□□□ 0.8
SORT1-203ENST00000471996 KCNK3O14649 394 aa20.05■□□□□ 0.8
SORT1-203ENST00000471996 RRP8O43159 456 aaKnown RBP20.05■□□□□ 0.8
SORT1-203ENST00000471996 STAU1O95793 577 aaKnown RBP20.05■□□□□ 0.8
SORT1-203ENST00000471996 IDEP14735 1019 aa20.05■□□□□ 0.8
SORT1-203ENST00000471996 GRIA4P48058 902 aa20.05■□□□□ 0.8
SORT1-203ENST00000471996 MFAP3P55082 362 aa20.05■□□□□ 0.8
SORT1-203ENST00000471996 CDH8P55286 799 aa20.05■□□□□ 0.8
SORT1-203ENST00000471996 GEN1Q17RS7 908 aa20.05■□□□□ 0.8
SORT1-203ENST00000471996 LARP1BQ659C4 914 aaKnown RBP20.05■□□□□ 0.8
SORT1-203ENST00000471996 UCMAQ8WVF2 138 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms