RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 ERCC4Q92889 916 aaPredicted RBP23.72■■□□□ 1.39
C9orf3-213ENST00000471978 TCEAL3Q969E4 200 aa23.72■■□□□ 1.39
C9orf3-213ENST00000471978 SMARCE1Q969G3 411 aa23.72■■□□□ 1.39
C9orf3-213ENST00000471978 BBS2Q9BXC9 721 aa23.72■■□□□ 1.39
C9orf3-213ENST00000471978 DNAJC17Q9NVM6 304 aaKnown RBP23.72■■□□□ 1.39
C9orf3-213ENST00000471978 BCCIPQ9P287 314 aaKnown RBP eCLIP23.72■■□□□ 1.39
C9orf3-213ENST00000471978 WDR35Q9P2L0 1181 aa23.72■■□□□ 1.39
C9orf3-213ENST00000471978 RALAP11233 206 aa23.71■■□□□ 1.39
C9orf3-213ENST00000471978 TYRP14679 529 aa23.71■■□□□ 1.39
C9orf3-213ENST00000471978 PMS1P54277 932 aaKnown RBP23.71■■□□□ 1.39
C9orf3-213ENST00000471978 STPG1Q5TH74 334 aa23.71■■□□□ 1.39
C9orf3-213ENST00000471978 TRMT11Q7Z4G4 463 aaKnown RBP23.71■■□□□ 1.39
C9orf3-213ENST00000471978 MIB1Q86YT6 1006 aa23.71■■□□□ 1.39
C9orf3-213ENST00000471978 ZC3H3Q8IXZ2 948 aaKnown RBP23.71■■□□□ 1.39
C9orf3-213ENST00000471978 OLIG1Q8TAK6 271 aa23.71■■□□□ 1.39
C9orf3-213ENST00000471978 SPATA20Q8TB22 786 aa23.71■■□□□ 1.39
C9orf3-213ENST00000471978 HMGB4Q8WW32 186 aa23.71■■□□□ 1.39
C9orf3-213ENST00000471978 DDX1Q92499 740 aaKnown RBP23.71■■□□□ 1.39
C9orf3-213ENST00000471978 XPO6Q96QU8 1125 aaKnown RBP23.71■■□□□ 1.39
C9orf3-213ENST00000471978 FAM124BQ9H5Z6 455 aaPredicted RBP23.71■■□□□ 1.39
C9orf3-213ENST00000471978 HOOK1Q9UJC3 728 aaKnown RBP23.71■■□□□ 1.39
C9orf3-213ENST00000471978 CIZ1Q9ULV3 898 aaPredicted RBP23.71■■□□□ 1.39
C9orf3-213ENST00000471978 TCRBV21S2A2A0A5A6 115 aa23.7■■□□□ 1.38
C9orf3-213ENST00000471978 CACNG3O60359 315 aa23.7■■□□□ 1.38
C9orf3-213ENST00000471978 ARHGAP17Q68EM7 881 aa23.7■■□□□ 1.38
C9orf3-213ENST00000471978 ZNF276Q8N554 614 aa23.7■■□□□ 1.38
C9orf3-213ENST00000471978 RLN3Q8WXF3 142 aa23.7■■□□□ 1.38
C9orf3-213ENST00000471978 CDK5RAP1Q96SZ6 601 aaKnown RBP23.7■■□□□ 1.38
C9orf3-213ENST00000471978 GTPBP4Q9BZE4 634 aaKnown RBP23.7■■□□□ 1.38
C9orf3-213ENST00000471978 UBXN6Q9BZV1 441 aa23.7■■□□□ 1.38
C9orf3-213ENST00000471978 CLIC5Q9NZA1 410 aa23.7■■□□□ 1.38
C9orf3-213ENST00000471978 MARK1Q9P0L2 795 aa23.7■■□□□ 1.38
C9orf3-213ENST00000471978 COQ4Q9Y3A0 265 aa23.7■■□□□ 1.38
C9orf3-213ENST00000471978 ABCA7Q8IZY2 2146 aa23.69■■□□□ 1.38
C9orf3-213ENST00000471978 TRIM49BA6NDI0 452 aa23.69■■□□□ 1.38
C9orf3-213ENST00000471978 ADRB1P08588 477 aa23.69■■□□□ 1.38
C9orf3-213ENST00000471978 SLC8A3P57103 927 aa23.69■■□□□ 1.38
C9orf3-213ENST00000471978 LRRC63Q05C16 580 aa23.69■■□□□ 1.38
C9orf3-213ENST00000471978 Q6ZNB5 142 aa23.69■■□□□ 1.38
C9orf3-213ENST00000471978 PIGZQ86VD9 579 aa23.69■■□□□ 1.38
C9orf3-213ENST00000471978 PGBD3Q8N328 593 aa23.69■■□□□ 1.38
C9orf3-213ENST00000471978 ANKRD52Q8NB46 1076 aa23.69■■□□□ 1.38
C9orf3-213ENST00000471978 SPACA7Q96KW9 195 aa23.69■■□□□ 1.38
C9orf3-213ENST00000471978 TIGD1Q96MW7 591 aa23.69■■□□□ 1.38
C9orf3-213ENST00000471978 ARMCX3Q9UH62 379 aaPredicted RBP23.69■■□□□ 1.38
C9orf3-213ENST00000471978 HCN2Q9UL51 889 aa23.69■■□□□ 1.38
C9orf3-213ENST00000471978 STARD13Q9Y3M8 1113 aa23.69■■□□□ 1.38
C9orf3-213ENST00000471978 STC2O76061 302 aa23.68■■□□□ 1.38
C9orf3-213ENST00000471978 KCNA4P22459 653 aa23.68■■□□□ 1.38
C9orf3-213ENST00000471978 P2RY2P41231 377 aa23.68■■□□□ 1.38
C9orf3-213ENST00000471978 DHPSP49366 369 aaPredicted RBP23.68■■□□□ 1.38
C9orf3-213ENST00000471978 CUL2Q13617 745 aa23.68■■□□□ 1.38
C9orf3-213ENST00000471978 RNF43Q68DV7 783 aa23.68■■□□□ 1.38
C9orf3-213ENST00000471978 CYP2U1Q7Z449 544 aa23.68■■□□□ 1.38
C9orf3-213ENST00000471978 BHMTQ93088 406 aa23.68■■□□□ 1.38
C9orf3-213ENST00000471978 RASAL2Q9UJF2 1139 aa23.68■■□□□ 1.38
C9orf3-213ENST00000471978 TM4SF5O14894 197 aa23.67■■□□□ 1.38
C9orf3-213ENST00000471978 MAP3K13O43283 966 aa23.67■■□□□ 1.38
C9orf3-213ENST00000471978 NTSR1P30989 418 aa23.67■■□□□ 1.38
C9orf3-213ENST00000471978 WASP42768 502 aa23.67■■□□□ 1.38
C9orf3-213ENST00000471978 COG7P83436 770 aa23.67■■□□□ 1.38
C9orf3-213ENST00000471978 EFEMP1Q12805 493 aa23.67■■□□□ 1.38
C9orf3-213ENST00000471978 RAB41Q5JT25 222 aa23.67■■□□□ 1.38
C9orf3-213ENST00000471978 ARHGAP18Q8N392 663 aa23.67■■□□□ 1.38
C9orf3-213ENST00000471978 SLC35C1Q96A29 364 aa23.67■■□□□ 1.38
C9orf3-213ENST00000471978 EDEM2Q9BV94 578 aa23.67■■□□□ 1.38
C9orf3-213ENST00000471978 ZNF510Q9Y2H8 683 aa23.67■■□□□ 1.38
C9orf3-213ENST00000471978 CNOT1A5YKK6 2376 aaKnown RBP23.67■■□□□ 1.38
C9orf3-213ENST00000471978 THADAQ6YHU6 1953 aa23.67■■□□□ 1.38
C9orf3-213ENST00000471978 MYO18AQ92614 2054 aaKnown RBP23.66■■□□□ 1.38
C9orf3-213ENST00000471978 KLKB1P03952 638 aa23.66■■□□□ 1.38
C9orf3-213ENST00000471978 HMBSP08397 361 aa23.66■■□□□ 1.38
C9orf3-213ENST00000471978 HOXB2P14652 356 aa23.66■■□□□ 1.38
C9orf3-213ENST00000471978 DGKGP49619 791 aa23.66■■□□□ 1.38
C9orf3-213ENST00000471978 STIM1Q13586 685 aa23.66■■□□□ 1.38
C9orf3-213ENST00000471978 BYSLQ13895 437 aaKnown RBP23.66■■□□□ 1.38
C9orf3-213ENST00000471978 GOLGA7BQ2TAP0 167 aa23.66■■□□□ 1.38
C9orf3-213ENST00000471978 MAP7D1Q3KQU3 841 aa23.66■■□□□ 1.38
C9orf3-213ENST00000471978 EGFLAMQ63HQ2 1017 aa23.66■■□□□ 1.38
C9orf3-213ENST00000471978 ISM2Q6H9L7 571 aa23.66■■□□□ 1.38
C9orf3-213ENST00000471978 TOGARAM2Q6ZUX3 1019 aa23.66■■□□□ 1.38
C9orf3-213ENST00000471978 LPCAT2Q7L5N7 544 aa23.66■■□□□ 1.38
C9orf3-213ENST00000471978 FRMD1Q8N878 549 aa23.66■■□□□ 1.38
C9orf3-213ENST00000471978 PLK2Q9NYY3 685 aa23.66■■□□□ 1.38
C9orf3-213ENST00000471978 PRRT4C9JH25 899 aa23.65■■□□□ 1.38
C9orf3-213ENST00000471978 PSMA7O14818 248 aa23.65■■□□□ 1.38
C9orf3-213ENST00000471978 KHNYNO15037 678 aaKnown RBP23.65■■□□□ 1.38
C9orf3-213ENST00000471978 TKTL1P51854 596 aa23.65■■□□□ 1.38
C9orf3-213ENST00000471978 YWHAGP61981 247 aaKnown RBP eCLIP23.65■■□□□ 1.38
C9orf3-213ENST00000471978 YWHAEP62258 255 aaKnown RBP23.65■■□□□ 1.38
C9orf3-213ENST00000471978 LRMPQ12912 555 aa23.65■■□□□ 1.38
C9orf3-213ENST00000471978 SGO2Q562F6 1265 aa23.65■■□□□ 1.38
C9orf3-213ENST00000471978 SDE2Q6IQ49 451 aa23.65■■□□□ 1.38
C9orf3-213ENST00000471978 RSRC2Q7L4I2 434 aaKnown RBP23.65■■□□□ 1.38
C9orf3-213ENST00000471978 CHPFQ8IZ52 775 aa23.65■■□□□ 1.38
C9orf3-213ENST00000471978 PIGKQ92643 395 aa23.65■■□□□ 1.38
C9orf3-213ENST00000471978 DHTKD1Q96HY7 919 aaPredicted RBP23.65■■□□□ 1.38
C9orf3-213ENST00000471978 ACOX2Q99424 681 aa23.65■■□□□ 1.38
C9orf3-213ENST00000471978 DCLK3Q9C098 648 aa23.65■■□□□ 1.38
C9orf3-213ENST00000471978 MBD1Q9UIS9 605 aaPredicted RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms