RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 PPM1AP35813 382 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 GLUD2P49448 558 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 CARSP49589 748 aaKnown RBP9.77□□□□□ -0.85
VPS52-216ENST00000471309 ATXN1P54253 815 aaKnown RBP9.77□□□□□ -0.85
VPS52-216ENST00000471309 YWHAGP61981 247 aaKnown RBP eCLIP9.77□□□□□ -0.85
VPS52-216ENST00000471309 PITX1P78337 314 aaPredicted RBP9.77□□□□□ -0.85
VPS52-216ENST00000471309 LMNB2Q03252 620 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 DEUP1Q05D60 604 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 SCAPQ12770 1279 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 PTK6Q13882 451 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 PSMD5Q16401 504 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 CA9Q16790 459 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 ZC3H12AQ5D1E8 599 aaKnown RBP9.77□□□□□ -0.85
VPS52-216ENST00000471309 BSPRYQ5W0U4 402 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 DUPD1Q68J44 220 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 PSRC1Q6PGN9 363 aaPredicted RBP9.77□□□□□ -0.85
VPS52-216ENST00000471309 PRSS55Q6UWB4 352 aaPredicted RBP9.77□□□□□ -0.85
VPS52-216ENST00000471309 RSPO2Q6UXX9 243 aaPredicted RBP9.77□□□□□ -0.85
VPS52-216ENST00000471309 TAS1R1Q7RTX1 841 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 TMCO2Q7Z6W1 182 aaPredicted RBP9.77□□□□□ -0.85
VPS52-216ENST00000471309 FAM131BQ86XD5 332 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 RFX6Q8HWS3 928 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 SCN4BQ8IWT1 228 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 GSPT2Q8IYD1 628 aaKnown RBP9.77□□□□□ -0.85
VPS52-216ENST00000471309 ARHGAP18Q8N392 663 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 CCDC185Q8N715 623 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 COLGALT1Q8NBJ5 622 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 ATL2Q8NHH9 583 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 SLC35B2Q8TB61 432 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 CAVIN3Q969G5 261 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 TMEM169Q96HH4 297 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 CEP295NLQ96MC4 621 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 PGLYRP2Q96PD5 576 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 YME1L1Q96TA2 773 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 FAM129AQ9BZQ8 928 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 FBXO44Q9H4M3 255 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 PLEKHA4Q9H4M7 779 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 ABCC13Q9NSE7 274 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 PIGVQ9NUD9 493 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 TMEM51Q9NW97 253 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 GPATCH2LQ9NWQ4 482 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 COMMD8Q9NX08 183 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 HSFX1Q9UBD0 423 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 STK39Q9UEW8 545 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 FZD10Q9ULW2 581 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 NFU1Q9UMS0 254 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 SCML2Q9UQR0 700 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 CDY1Q9Y6F8 540 aa9.77□□□□□ -0.85
VPS52-216ENST00000471309 FAM92AA1XBS5 289 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 APOL1O14791 398 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 DAPK3O43293 454 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 RTN3O95197 1032 aaPredicted RBP9.76□□□□□ -0.85
VPS52-216ENST00000471309 VNN2O95498 520 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 IGLV3-25P01717 112 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 FGBP02675 491 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 ITGAVP06756 1048 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 HAPLN1P10915 354 aaPredicted RBP9.76□□□□□ -0.85
VPS52-216ENST00000471309 TGM2P21980 687 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 IL4RP24394 825 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 L1CAMP32004 1257 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 KCNJ1P48048 391 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 VCPP55072 806 aaKnown RBP9.76□□□□□ -0.85
VPS52-216ENST00000471309 ARPP19P56211 112 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 RPL10AP62906 217 aaKnown RBP9.76□□□□□ -0.85
VPS52-216ENST00000471309 DYNLT1P63172 113 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 HTRA4P83105 476 aaPredicted RBP9.76□□□□□ -0.85
VPS52-216ENST00000471309 OTUD4Q01804 1114 aaKnown RBP9.76□□□□□ -0.85
VPS52-216ENST00000471309 ROR1Q01973 937 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 DSG1Q02413 1049 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 KRT17Q04695 432 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 NME3Q13232 169 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 SNX1Q13596 522 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 BYSLQ13895 437 aaKnown RBP9.76□□□□□ -0.85
VPS52-216ENST00000471309 PPP1R7Q15435 360 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 OASLQ15646 514 aaKnown RBP9.76□□□□□ -0.85
VPS52-216ENST00000471309 ANKRD20A8PQ5CZ79 823 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 EFHC2Q5JST6 749 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 SPOUT1Q5T280 376 aaKnown RBP9.76□□□□□ -0.85
VPS52-216ENST00000471309 SLC9A4Q6AI14 798 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 KIAA1841Q6NSI8 718 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 FAM117BQ6P1L5 589 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 RNF19BQ6ZMZ0 732 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 SND1Q7KZF4 910 aaKnown RBP eCLIP9.76□□□□□ -0.85
VPS52-216ENST00000471309 C16orf59Q7L2K0 433 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 OTOP2Q7RTS6 562 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 HDXQ7Z353 690 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 DDX53Q86TM3 631 aaKnown RBP9.76□□□□□ -0.85
VPS52-216ENST00000471309 TAC4Q86UU9 113 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 GPR65Q8IYL9 337 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 NUP93Q8N1F7 819 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 ATAD1Q8NBU5 361 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 FBXO22Q8NEZ5 403 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 SCAMP5Q8TAC9 235 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 SLC7A14Q8TBB6 771 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 ACTL9Q8TC94 416 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 CCHCR1Q8TD31 782 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.76□□□□□ -0.85
VPS52-216ENST00000471309 DQX1Q8TE96 717 aaKnown RBP9.76□□□□□ -0.85
VPS52-216ENST00000471309 IFT81Q8WYA0 676 aa9.76□□□□□ -0.85
VPS52-216ENST00000471309 RIN2Q8WYP3 895 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms