RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 FAM35AQ86V20 835 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 CCDC105Q8IYK2 499 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 CCDC26Q8TAB7 109 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 CENPIQ92674 756 aaPredicted RBP9.57□□□□□ -0.88
PTPRE-207ENST00000471218 ALG3Q92685 438 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 SLCO2A1Q92959 643 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 SHDQ96IW2 340 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 DPEP3Q9H4B8 488 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 PLEKHA4Q9H4M7 779 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 CRTAC1Q9NQ79 661 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 FAM49BQ9NUQ9 324 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 COMMD8Q9NX08 183 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 FAN1Q9Y2M0 1017 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 KMT2EQ8IZD2 1858 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 MYO15AQ9UKN7 3530 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 VPS13AQ96RL7 3174 aa9.57□□□□□ -0.88
PTPRE-207ENST00000471218 FAM187AA6NFU0 413 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 NT5C1B-RDH14C9J2C7 533 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 KRIT1O00522 736 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 NDC80O14777 642 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 MDM4O15151 490 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 ZNF185O15231 689 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 PAPSS1O43252 624 aaPredicted RBP9.56□□□□□ -0.88
PTPRE-207ENST00000471218 ATP8B1O43520 1251 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 TADA2AO75478 443 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 DAB1O75553 588 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 DDHD2O94830 711 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 EFEMP2O95967 443 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 PDGFBP01127 241 aaPredicted RBP9.56□□□□□ -0.88
PTPRE-207ENST00000471218 CALCAP01258 141 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 LMNAP02545 664 aaKnown RBP9.56□□□□□ -0.88
PTPRE-207ENST00000471218 FGGP02679 453 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 URODP06132 367 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 CCDC130P13994 396 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 GPD1P21695 349 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 SDC4P31431 198 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 CXCR5P32302 372 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 RFC1P35251 1148 aaPredicted RBP9.56□□□□□ -0.88
PTPRE-207ENST00000471218 PBX3P40426 434 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 RPL7AP62424 266 aaKnown RBP9.56□□□□□ -0.88
PTPRE-207ENST00000471218 ZNF252P-AS1Q0IIN9 211 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 MTA1Q13330 715 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 ELF2Q15723 593 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 TAZQ16635 292 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 ERCC6LQ2NKX8 1250 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 MDH1BQ5I0G3 518 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 CYP4A22Q5TCH4 519 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 DCAF12L1Q5VU92 463 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 PM20D1Q6GTS8 502 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 OR6B2Q6IFH4 312 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 DRICH1Q6PGQ1 229 aaPredicted RBP9.56□□□□□ -0.88
PTPRE-207ENST00000471218 TMC5Q6UXY8 1006 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 CLEC20AQ6ZU45 233 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 FAM183BPQ6ZVS7 135 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 PAQR9Q6ZVX9 377 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 DNAAF5Q86Y56 855 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 SLC13A5Q86YT5 568 aaPredicted RBP9.56□□□□□ -0.88
PTPRE-207ENST00000471218 MAP7D3Q8IWC1 876 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 SIX6OS1Q8N1H7 587 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 DTWD2Q8NBA8 298 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 TTC13Q8NBP0 860 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 UBA3Q8TBC4 463 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 KRT35Q92764 455 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 NT5C3BQ969T7 300 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 PGAP3Q96FM1 320 aaPredicted RBP9.56□□□□□ -0.88
PTPRE-207ENST00000471218 PCED1BQ96HM7 432 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 CAPZA3Q96KX2 299 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 SLC2A13Q96QE2 648 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 DDX23Q9BUQ8 820 aaKnown RBP9.56□□□□□ -0.88
PTPRE-207ENST00000471218 B3GNT5Q9BYG0 378 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 ZCWPW1Q9H0M4 648 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 GOLPH3Q9H4A6 298 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 NRDE2Q9H7Z3 1164 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 KCNK12Q9HB15 430 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 LRRC4Q9HBW1 653 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 ST7Q9NRC1 585 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.56□□□□□ -0.88
PTPRE-207ENST00000471218 KRT82Q9NSB4 513 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 STIM2Q9P246 746 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 RCOR3Q9P2K3 495 aaPredicted RBP9.56□□□□□ -0.88
PTPRE-207ENST00000471218 HCSTQ9UBK5 93 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 PCYOX1Q9UHG3 505 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 STAP1Q9ULZ2 295 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 BACE2Q9Y5Z0 518 aa9.56□□□□□ -0.88
PTPRE-207ENST00000471218 TRIP11Q15643 1979 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 NRP1O14786 923 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 TRIM66O15016 1216 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 TBC1D4O60343 1298 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 LRCH4O75427 683 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 AP1G2O75843 785 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 ENDOD1O94919 500 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 TJP3O95049 919 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 F9P00740 461 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 SOD2P04179 222 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 ASGR2P07307 311 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 PDGFRAP16234 1089 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 EPCAMP16422 314 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 TKTP29401 623 aaKnown RBP9.55□□□□□ -0.88
PTPRE-207ENST00000471218 MATKP42679 507 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 OR1G1P47890 313 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms