RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 IL37Q9NZH6 218 aa10.18□□□□□ -0.78
CCM2-204ENST00000470837 FAM92AA1XBS5 289 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 LRRD1A4D1F6 860 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 CTAGE15A4D2H0 777 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 PGRMC1O00264 195 aaKnown RBP10.17□□□□□ -0.78
CCM2-204ENST00000470837 DDX3YO15523 660 aaKnown RBP10.17□□□□□ -0.78
CCM2-204ENST00000470837 CLASP2O75122 1294 aaKnown RBP10.17□□□□□ -0.78
CCM2-204ENST00000470837 TRUB2O95900 331 aaKnown RBP10.17□□□□□ -0.78
CCM2-204ENST00000470837 APOEP02649 317 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 HNRNPA1P09651 372 aaKnown RBP eCLIP10.17□□□□□ -0.78
CCM2-204ENST00000470837 CTAGE8P0CG41 777 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 RARGP13631 454 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 CDC25CP30307 473 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 IRS1P35568 1242 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 AIF1P55008 147 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 COPS2P61201 443 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 USP46P62068 366 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 ZNF252P-AS1Q0IIN9 211 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 MTA1Q13330 715 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 LONRF2Q1L5Z9 754 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 SMTNL2Q2TAL5 461 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 EFHC2Q5JST6 749 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 HECTD3Q5T447 861 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 ERMARDQ5T6L9 678 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 SYPL2Q5VXT5 272 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 CCDC70Q6NSX1 233 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 LILRA6Q6PI73 481 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 SPRED2Q7Z698 418 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 DNAJB7Q7Z6W7 309 aaPredicted RBP10.17□□□□□ -0.78
CCM2-204ENST00000470837 RBM23Q86U06 439 aaKnown RBP10.17□□□□□ -0.78
CCM2-204ENST00000470837 CTAGE6Q86UF2 777 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 CTAGE4Q8IX94 777 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 EXD1Q8NHP7 514 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 ADAM32Q8TC27 787 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 DQX1Q8TE96 717 aaKnown RBP10.17□□□□□ -0.78
CCM2-204ENST00000470837 TEKT4Q8WW24 435 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 MRPS31Q92665 395 aaKnown RBP10.17□□□□□ -0.78
CCM2-204ENST00000470837 CENPIQ92674 756 aaPredicted RBP10.17□□□□□ -0.78
CCM2-204ENST00000470837 KRT35Q92764 455 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 KHSRPQ92945 711 aaKnown RBP eCLIP10.17□□□□□ -0.78
CCM2-204ENST00000470837 CD101Q93033 1021 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 PGAP3Q96FM1 320 aaPredicted RBP10.17□□□□□ -0.78
CCM2-204ENST00000470837 RPGRIP1Q96KN7 1286 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 MYRFLQ96LU7 910 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 NPY6RQ99463 290 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 WDCPQ9H6R7 721 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 RASAL2Q9UJF2 1139 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 MRFAP1Q9Y605 127 aa10.17□□□□□ -0.78
CCM2-204ENST00000470837 A0A1W2PPC1 479 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 PER2O15055 1255 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 CCL16O15467 120 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 TLR5O60602 858 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 ZMYND10O75800 440 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 HOXA9P31269 272 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 CCR1P32246 355 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 ATP5C1P36542 298 aaKnown RBP10.16□□□□□ -0.78
CCM2-204ENST00000470837 ARL4AP40617 200 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 NRIP1P48552 1158 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 PEX5P50542 639 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 HDAC4P56524 1084 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 TAS2R40P59535 323 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 TUBB4BP68371 445 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 AMPD2Q01433 879 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 EFEMP1Q12805 493 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 ZNF211Q13398 564 aaPredicted RBP10.16□□□□□ -0.78
CCM2-204ENST00000470837 PDK2Q15119 407 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 ARHGAP15Q53QZ3 475 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 BRMS1LQ5PSV4 323 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 SH3PXD2AQ5TCZ1 1133 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 DAB2IPQ5VWQ8 1189 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 TRNP1Q6NT89 227 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 BHLHA9Q7RTU4 235 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 SCD5Q86SK9 330 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 TAC4Q86UU9 113 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 FAM131BQ86XD5 332 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 PSTKQ8IV42 348 aaKnown RBP10.16□□□□□ -0.78
CCM2-204ENST00000470837 LEMD2Q8NC56 503 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 ACTRT1Q8TDG2 376 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.16□□□□□ -0.78
CCM2-204ENST00000470837 COG1Q8WTW3 980 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 ALG3Q92685 438 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 CASP10Q92851 521 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 NT5C3BQ969T7 300 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 MRPL38Q96DV4 380 aaKnown RBP10.16□□□□□ -0.78
CCM2-204ENST00000470837 CALN1Q9BXU9 219 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 SMOC2Q9H3U7 446 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 PIDD1Q9HB75 910 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 TRPC7Q9HCX4 862 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.16□□□□□ -0.78
CCM2-204ENST00000470837 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.16□□□□□ -0.78
CCM2-204ENST00000470837 ZDHHC7Q9NXF8 308 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 MARCH2Q9P0N8 246 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 DNMT3LQ9UJW3 386 aa10.16□□□□□ -0.78
CCM2-204ENST00000470837 SLC12A8A0AV02 714 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 ZNF840PA6NDX5 716 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 KRIT1O00522 736 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 MDM4O15151 490 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 ZNF185O15231 689 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 DAPK3O43293 454 aa10.15□□□□□ -0.78
CCM2-204ENST00000470837 ENDOD1O94919 500 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms