RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 SLC7A14Q8TBB6 771 aa9.08□□□□□ -0.96
HDLBP-233ENST00000470710 MICAL1Q8TDZ2 1067 aa9.08□□□□□ -0.96
HDLBP-233ENST00000470710 DQX1Q8TE96 717 aaKnown RBP9.08□□□□□ -0.96
HDLBP-233ENST00000470710 GIPC2Q8TF65 315 aa9.08□□□□□ -0.96
HDLBP-233ENST00000470710 RBM41Q96IZ5 413 aaKnown RBP9.08□□□□□ -0.96
HDLBP-233ENST00000470710 CAPZA3Q96KX2 299 aa9.08□□□□□ -0.96
HDLBP-233ENST00000470710 SLITRK1Q96PX8 696 aa9.08□□□□□ -0.96
HDLBP-233ENST00000470710 CDK5RAP1Q96SZ6 601 aaKnown RBP9.08□□□□□ -0.96
HDLBP-233ENST00000470710 NAP1L3Q99457 506 aaPredicted RBP9.08□□□□□ -0.96
HDLBP-233ENST00000470710 PRO3102Q9H379 93 aa9.08□□□□□ -0.96
HDLBP-233ENST00000470710 SMOC2Q9H3U7 446 aa9.08□□□□□ -0.96
HDLBP-233ENST00000470710 NMUR1Q9HB89 426 aa9.08□□□□□ -0.96
HDLBP-233ENST00000470710 TLR8Q9NR97 1041 aaKnown RBP9.08□□□□□ -0.96
HDLBP-233ENST00000470710 UXTQ9UBK9 157 aaPredicted RBP9.08□□□□□ -0.96
HDLBP-233ENST00000470710 PATJQ8NI35 1801 aa9.08□□□□□ -0.96
HDLBP-233ENST00000470710 CTAGE15A4D2H0 777 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 ZNF487B1APH4 448 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 M0QYT0 321 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 CLASP2O75122 1294 aaKnown RBP9.07□□□□□ -0.96
HDLBP-233ENST00000470710 SLU7O95391 586 aaKnown RBP9.07□□□□□ -0.96
HDLBP-233ENST00000470710 KRT1P04264 644 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 POU2F2P09086 479 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 CTAGE8P0CG41 777 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 RARAP10276 462 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 RALAP11233 206 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 HOXA9P31269 272 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 GBP1P32455 592 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 IRS1P35568 1242 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 CETN2P41208 172 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 CXCR3P49682 368 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 PGFP49763 221 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 ARSEP51690 589 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 AIF1P55008 147 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 PITX1P78337 314 aaPredicted RBP9.07□□□□□ -0.96
HDLBP-233ENST00000470710 SMAD3P84022 425 aaKnown RBP9.07□□□□□ -0.96
HDLBP-233ENST00000470710 DEUP1Q05D60 604 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 SCAPQ12770 1279 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 IFRD2Q12894 506 aaPredicted RBP9.07□□□□□ -0.96
HDLBP-233ENST00000470710 NNTQ13423 1086 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 EIF4EBP2Q13542 120 aaPredicted RBP9.07□□□□□ -0.96
HDLBP-233ENST00000470710 PPP2R5EQ16537 467 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 TAZQ16635 292 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 RAB6CQ53S08 254 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 TXNRD3NBQ6F5E7 133 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 KLHDC10Q6PID8 442 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 CTAGE6Q86UF2 777 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 TAC4Q86UU9 113 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 CTAGE4Q8IX94 777 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 FAM71BQ8TC56 605 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 RNF139Q8WU17 664 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 SLC22A17Q8WUG5 538 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 HDAC7Q8WUI4 952 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 EDEM1Q92611 657 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 PSMG2Q969U7 264 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 NTAN1Q96AB6 310 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 MS4A14Q96JA4 679 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 RPGRIP1Q96KN7 1286 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 PEBP4Q96S96 227 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 CARD6Q9BX69 1037 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 RAB6CQ9H0N0 254 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 PLEKHA4Q9H4M7 779 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 FAM204AQ9H8W3 233 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 ZWILCHQ9H900 591 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 SLC28A3Q9HAS3 691 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 WDR6Q9NNW5 1121 aaKnown RBP9.07□□□□□ -0.96
HDLBP-233ENST00000470710 OLA1Q9NTK5 396 aaKnown RBP9.07□□□□□ -0.96
HDLBP-233ENST00000470710 PIGVQ9NUD9 493 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.07□□□□□ -0.964e-13■□□□□ 9
HDLBP-233ENST00000470710 DDIT4Q9NX09 232 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 OSER1Q9NX31 292 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 CALCOCO1Q9P1Z2 691 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 PCSK1NQ9UHG2 260 aa9.07□□□□□ -0.96
HDLBP-233ENST00000470710 LAMA2P24043 3122 aaKnown RBP9.07□□□□□ -0.96
HDLBP-233ENST00000470710 CHD9Q3L8U1 2897 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 LRRD1A4D1F6 860 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 ZNF840PA6NDX5 716 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 C3orf70A6NLC5 250 aaPredicted RBP9.06□□□□□ -0.96
HDLBP-233ENST00000470710 IRAK2O43187 625 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 FGGP02679 453 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 LRG1P02750 347 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 C8AP07357 584 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 RARGP13631 454 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 KDELR1P24390 212 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 GJC1P36383 396 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 TUBP50607 506 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 ATXN1P54253 815 aaKnown RBP9.06□□□□□ -0.96
HDLBP-233ENST00000470710 TUBB4BP68371 445 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 ZNF211Q13398 564 aaPredicted RBP9.06□□□□□ -0.96
HDLBP-233ENST00000470710 PDK2Q15119 407 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 TAF12Q16514 161 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 DPYSL2Q16555 572 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 SMTNL2Q2TAL5 461 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 ATP13A4Q4VNC1 1196 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 ODF2Q5BJF6 829 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 KCNT1Q5JUK3 1230 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 ERMARDQ5T6L9 678 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 SCYL2Q6P3W7 929 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 ELMSAN1Q6PJG2 1045 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 SPOCD1Q6ZMY3 1216 aa9.06□□□□□ -0.96
HDLBP-233ENST00000470710 SND1Q7KZF4 910 aaKnown RBP eCLIP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms