RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 DRD2P14416 443 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 CD58P19256 250 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 LMO2P25791 158 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 KRT9P35527 623 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 CDR1P51861 262 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 ZBED6P86452 979 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 CCZ1BP86790 482 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 CCZ1P86791 482 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-208ENST00000470268 MYO1EQ12965 1108 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 FZD5Q13467 585 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 WSCD1Q658N2 575 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 PDXDC1Q6P996 788 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 DCLRE1AQ6PJP8 1040 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 KCNT2Q6UVM3 1135 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 TAS1R1Q7RTX1 841 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 IRF2BP2Q7Z5L9 587 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 OSTM1Q86WC4 334 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 TMEM139Q8IV31 216 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 HID1Q8IV36 788 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 LRRC8AQ8IWT6 810 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 MRPL41Q8IXM3 137 aaKnown RBP5.03□□□□□ -1.6
SF3B1-208ENST00000470268 RNF168Q8IYW5 571 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-208ENST00000470268 ARMC10Q8N2F6 343 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 AGGF1Q8N302 714 aaeCLIP5.03□□□□□ -1.6
SF3B1-208ENST00000470268 PDCL2Q8N4E4 241 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 RSPH1Q8WYR4 309 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 TAF4BQ92750 862 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 UTP4Q969X6 686 aaKnown RBP5.03□□□□□ -1.6
SF3B1-208ENST00000470268 ACSF2Q96CM8 615 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-208ENST00000470268 FAM46AQ96IP4 442 aaKnown RBP5.03□□□□□ -1.6
SF3B1-208ENST00000470268 B3GALT6Q96L58 329 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 SENP8Q96LD8 212 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 ZNF560Q96MR9 790 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 UROC1Q96N76 676 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 MMS19Q96T76 1030 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 RAD9AQ99638 391 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 RTP3Q9BQQ7 232 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 ZSWIM1Q9BR11 485 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 NUP58Q9BVL2 599 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 STK33Q9BYT3 514 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 OSBPL2Q9H1P3 480 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 PRO3102Q9H379 93 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 CISHQ9NSE2 258 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 ABHD10Q9NUJ1 306 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 SIRPGQ9P1W8 387 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 ADAM28Q9UKQ2 775 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 FAN1Q9Y2M0 1017 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 YBX2Q9Y2T7 364 aaKnown RBP5.03□□□□□ -1.6
SF3B1-208ENST00000470268 R3HCC1Q9Y3T6 440 aaKnown RBP5.03□□□□□ -1.6
SF3B1-208ENST00000470268 INSL6Q9Y581 213 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.03□□□□□ -1.63e-12■□□□□ 10
SF3B1-208ENST00000470268 TRIP11Q15643 1979 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 CHD9Q3L8U1 2897 aa5.03□□□□□ -1.6
SF3B1-208ENST00000470268 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.02□□□□□ -1.61
SF3B1-208ENST00000470268 LINC01553A4QN01 128 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 AKR1B15C9JRZ8 316 aaPredicted RBP5.02□□□□□ -1.61
SF3B1-208ENST00000470268 GABRDO14764 452 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 CYP26A1O43174 497 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 GFPT2O94808 682 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 PLEKP08567 350 aaPredicted RBP5.02□□□□□ -1.61
SF3B1-208ENST00000470268 SKILP12757 684 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 TKTP29401 623 aaKnown RBP5.02□□□□□ -1.61
SF3B1-208ENST00000470268 SOX5P35711 763 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 PNPLA4P41247 253 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 ALDH7A1P49419 539 aaKnown RBP5.02□□□□□ -1.61
SF3B1-208ENST00000470268 ZNF132P52740 706 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 MFAP3P55082 362 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 TNNC1P63316 161 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 INCA1Q0VD86 236 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 SV2CQ496J9 727 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 TMEM270Q6UE05 265 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 CACNA2D4Q7Z3S7 1137 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 NOP9Q86U38 636 aaKnown RBP5.02□□□□□ -1.61
SF3B1-208ENST00000470268 SLC47A2Q86VL8 602 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 FAM71AQ8IYT1 594 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 SLC39A11Q8N1S5 342 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 FIBCD1Q8N539 461 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 COLGALT1Q8NBJ5 622 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 IGSF21Q96ID5 467 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 SPAG5Q96R06 1193 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 DNAJC7Q99615 494 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 CHP1Q99653 195 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 TMEM175Q9BSA9 504 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 C17orf80Q9BSJ5 609 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 EDEM3Q9BZQ6 932 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 ELOVL4Q9GZR5 314 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 MTIF3Q9H2K0 278 aaKnown RBP5.02□□□□□ -1.61
SF3B1-208ENST00000470268 DPEP3Q9H4B8 488 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 C7orf69Q9H7B7 122 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 TRMT1Q9NXH9 659 aaKnown RBP5.02□□□□□ -1.61
SF3B1-208ENST00000470268 ARHGAP20Q9P2F6 1191 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 IMPACTQ9P2X3 320 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 CNTN6Q9UQ52 1028 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 LUC7L2Q9Y383 392 aaKnown RBP5.02□□□□□ -1.61
SF3B1-208ENST00000470268 ACTL7BQ9Y614 415 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 PDCD11Q14690 1871 aaKnown RBP5.02□□□□□ -1.61
SF3B1-208ENST00000470268 FNDC1Q4ZHG4 1894 aaPredicted RBP5.02□□□□□ -1.61
SF3B1-208ENST00000470268 SCN1AP35498 2009 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 SZT2Q5T011 3432 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 TNFRSF10CO14798 259 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms