RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 STIP1P31948 543 aaKnown RBP18.51■□□□□ 0.55
MCF2L-221ENST00000469415 PCK1P35558 622 aa18.51■□□□□ 0.55
MCF2L-221ENST00000469415 SOX4Q06945 474 aaPredicted RBP18.51■□□□□ 0.55
MCF2L-221ENST00000469415 AP1B1Q10567 949 aa18.51■□□□□ 0.55
MCF2L-221ENST00000469415 GPR142Q7Z601 462 aa18.51■□□□□ 0.55
MCF2L-221ENST00000469415 TTC7BQ86TV6 843 aa18.51■□□□□ 0.55
MCF2L-221ENST00000469415 NPLOC4Q8TAT6 608 aa18.51■□□□□ 0.55
MCF2L-221ENST00000469415 KCNN1Q92952 543 aa18.51■□□□□ 0.55
MCF2L-221ENST00000469415 SNX25Q9H3E2 840 aa18.51■□□□□ 0.55
MCF2L-221ENST00000469415 ZFP69BQ9UJL9 534 aa18.51■□□□□ 0.55
MCF2L-221ENST00000469415 TREHO43280 583 aa18.5■□□□□ 0.55
MCF2L-221ENST00000469415 DIAPH2O60879 1101 aa18.5■□□□□ 0.55
MCF2L-221ENST00000469415 GABRB2P47870 512 aa18.5■□□□□ 0.55
MCF2L-221ENST00000469415 ACVR2BQ13705 512 aa18.5■□□□□ 0.55
MCF2L-221ENST00000469415 DEPDC1BQ8WUY9 529 aa18.5■□□□□ 0.55
MCF2L-221ENST00000469415 NRDE2Q9H7Z3 1164 aa18.5■□□□□ 0.55
MCF2L-221ENST00000469415 HEY2Q9UBP5 337 aa18.5■□□□□ 0.55
MCF2L-221ENST00000469415 C2CD2Q9Y426 696 aa18.5■□□□□ 0.55
MCF2L-221ENST00000469415 COPEO14579 308 aa18.5■□□□□ 0.55
MCF2L-221ENST00000469415 MAP2K2P36507 400 aa18.5■□□□□ 0.55
MCF2L-221ENST00000469415 AFF1P51825 1210 aaKnown RBP18.5■□□□□ 0.55
MCF2L-221ENST00000469415 SESN3P58005 492 aa18.5■□□□□ 0.55
MCF2L-221ENST00000469415 ADIGQ0VDE8 80 aa18.5■□□□□ 0.55
MCF2L-221ENST00000469415 IFRD2Q12894 506 aaPredicted RBP18.5■□□□□ 0.55
MCF2L-221ENST00000469415 BOLA3Q53S33 107 aa18.5■□□□□ 0.55
MCF2L-221ENST00000469415 FYB2Q5VWT5 728 aa18.5■□□□□ 0.55
MCF2L-221ENST00000469415 TDRPQ86YL5 185 aa18.5■□□□□ 0.55
MCF2L-221ENST00000469415 BEST2Q8NFU1 509 aa18.5■□□□□ 0.55
MCF2L-221ENST00000469415 BRI3BPQ8WY22 251 aa18.5■□□□□ 0.55
MCF2L-221ENST00000469415 GCOM2Q9BZD3 368 aaPredicted RBP18.5■□□□□ 0.55
MCF2L-221ENST00000469415 KLC2Q9H0B6 622 aa18.5■□□□□ 0.55
MCF2L-221ENST00000469415 FAM237BA0A1B0GVD1 139 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 KCNK1O00180 336 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 BEST1O76090 585 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 UNC5CO95185 931 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 TKTP29401 623 aaKnown RBP18.49■□□□□ 0.55
MCF2L-221ENST00000469415 KCNJ11Q14654 390 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 DGKDQ16760 1214 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 C16orf46Q6P387 395 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 CAND1Q86VP6 1230 aaKnown RBP18.49■□□□□ 0.55
MCF2L-221ENST00000469415 DEFB106AQ8N104 65 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 PDCD7Q8N8D1 485 aaKnown RBP18.49■□□□□ 0.55
MCF2L-221ENST00000469415 BANPQ8N9N5 519 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 SLC35F5Q8WV83 523 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 TSSK1BQ9BXA7 367 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 TEX264Q9Y6I9 313 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 MYL3P08590 195 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 CTSHP09668 335 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 CSH1P0DML2 217 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 CSH2P0DML3 217 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 SERPINB3P29508 390 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 INCA1Q0VD86 236 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 HACE1Q8IYU2 909 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 GIMAP7Q8NHV1 300 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 UTP4Q969X6 686 aaKnown RBP18.49■□□□□ 0.55
MCF2L-221ENST00000469415 MED10Q9BTT4 135 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 ZMYND8Q9ULU4 1186 aaPredicted RBP18.49■□□□□ 0.55
MCF2L-221ENST00000469415 IQANK1A0A1B0GTG1 560 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 FBXO47Q5MNV8 452 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 C9orf57Q5W0N0 161 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 SLC27A1Q6PCB7 646 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 LONP2Q86WA8 852 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 SRPK1Q96SB4 655 aaKnown RBP18.49■□□□□ 0.55
MCF2L-221ENST00000469415 SENP1Q9P0U3 644 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 PAK5Q9P286 719 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 EFR3BQ9Y2G0 817 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 STARD13Q9Y3M8 1113 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 PPME1Q9Y570 386 aa18.49■□□□□ 0.55
MCF2L-221ENST00000469415 SMIM28A0A1B0GU29 152 aa18.48■□□□□ 0.55
MCF2L-221ENST00000469415 ANP32DO95626 131 aa18.48■□□□□ 0.55
MCF2L-221ENST00000469415 SMIM10L2AP0DMW4 78 aa18.48■□□□□ 0.55
MCF2L-221ENST00000469415 SMIM10L2BP0DMW5 78 aa18.48■□□□□ 0.55
MCF2L-221ENST00000469415 GRM5P41594 1212 aa18.48■□□□□ 0.55
MCF2L-221ENST00000469415 TWF2Q6IBS0 349 aaKnown RBP18.48■□□□□ 0.55
MCF2L-221ENST00000469415 VPS52Q8N1B4 723 aa18.48■□□□□ 0.55
MCF2L-221ENST00000469415 GBP7Q8N8V2 638 aaPredicted RBP18.48■□□□□ 0.55
MCF2L-221ENST00000469415 C10orf82Q8WW14 230 aa18.48■□□□□ 0.55
MCF2L-221ENST00000469415 MAML3Q96JK9 1138 aa18.48■□□□□ 0.55
MCF2L-221ENST00000469415 KCTD15Q96SI1 283 aaPredicted RBP18.48■□□□□ 0.55
MCF2L-221ENST00000469415 TINF2Q9BSI4 451 aa18.48■□□□□ 0.55
MCF2L-221ENST00000469415 PTPRFP10586 1907 aa18.48■□□□□ 0.55
MCF2L-221ENST00000469415 WDR27A2RRH5 827 aa18.48■□□□□ 0.55
MCF2L-221ENST00000469415 KPNA7A9QM74 516 aa18.48■□□□□ 0.55
MCF2L-221ENST00000469415 TROVE2P10155 538 aaKnown RBP eCLIP18.48■□□□□ 0.55
MCF2L-221ENST00000469415 CYP2B6P20813 491 aa18.48■□□□□ 0.55
MCF2L-221ENST00000469415 SULT1E1P49888 294 aa18.48■□□□□ 0.55
MCF2L-221ENST00000469415 TAZQ16635 292 aa18.48■□□□□ 0.55
MCF2L-221ENST00000469415 FAM187BQ17R55 369 aa18.48■□□□□ 0.55
MCF2L-221ENST00000469415 FAM47CQ5HY64 1035 aa18.48■□□□□ 0.55
MCF2L-221ENST00000469415 RNF43Q68DV7 783 aa18.48■□□□□ 0.55
MCF2L-221ENST00000469415 HEATR6Q6AI08 1181 aaKnown RBP18.48■□□□□ 0.55
MCF2L-221ENST00000469415 LINC01465Q8N7H1 131 aa18.48■□□□□ 0.55
MCF2L-221ENST00000469415 APOL2Q9BQE5 337 aa18.48■□□□□ 0.55
MCF2L-221ENST00000469415 ACSS2Q9NR19 701 aa18.48■□□□□ 0.55
MCF2L-221ENST00000469415 GEMIN8Q9NWZ8 242 aaKnown RBP18.48■□□□□ 0.55
MCF2L-221ENST00000469415 RGPD3A6NKT7 1758 aaPredicted RBP18.47■□□□□ 0.55
MCF2L-221ENST00000469415 RGPD4Q7Z3J3 1758 aa18.47■□□□□ 0.55
MCF2L-221ENST00000469415 CFAP73A6NFT4 308 aa18.47■□□□□ 0.55
MCF2L-221ENST00000469415 I3L4J1 428 aa18.47■□□□□ 0.55
MCF2L-221ENST00000469415 ZWINTO95229 277 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms